RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 ZNF408Q9H9D4 720 aa20■□□□□ 0.79
HMGXB4-206ENST00000466438 GRIPAP1Q4V328 841 aa19.99■□□□□ 0.79
HMGXB4-206ENST00000466438 FMNL2Q96PY5 1086 aa19.99■□□□□ 0.79
HMGXB4-206ENST00000466438 PGAP2Q9UHJ9 254 aa19.99■□□□□ 0.79
HMGXB4-206ENST00000466438 HMOX1P09601 288 aa19.98■□□□□ 0.79
HMGXB4-206ENST00000466438 TEFQ10587 303 aa19.98■□□□□ 0.79
HMGXB4-206ENST00000466438 NIM1KQ8IY84 436 aa19.98■□□□□ 0.79
HMGXB4-206ENST00000466438 NBPF15Q8N660 670 aa19.98■□□□□ 0.79
HMGXB4-206ENST00000466438 NIP7Q9Y221 180 aaKnown RBP eCLIP19.98■□□□□ 0.79
HMGXB4-206ENST00000466438 RGL2O15211 777 aa19.97■□□□□ 0.79
HMGXB4-206ENST00000466438 CRY2Q49AN0 593 aa19.97■□□□□ 0.79
HMGXB4-206ENST00000466438 POLR3GLQ9BT43 218 aa19.97■□□□□ 0.79
HMGXB4-206ENST00000466438 SIPA1L3O60292 1781 aaPredicted RBP19.97■□□□□ 0.79
HMGXB4-206ENST00000466438 HUNKP57058 714 aa19.96■□□□□ 0.79
HMGXB4-206ENST00000466438 CTU1Q7Z7A3 348 aaKnown RBP19.96■□□□□ 0.79
HMGXB4-206ENST00000466438 CCER1Q8TC90 406 aaPredicted RBP19.96■□□□□ 0.79
HMGXB4-206ENST00000466438 ZC3H15Q8WU90 426 aaKnown RBP19.96■□□□□ 0.79
HMGXB4-206ENST00000466438 CDC37L1Q7L3B6 337 aa19.95■□□□□ 0.78
HMGXB4-206ENST00000466438 FAM177BA6PVY3 158 aa19.94■□□□□ 0.78
HMGXB4-206ENST00000466438 CDHR2Q9BYE9 1310 aa19.94■□□□□ 0.78
HMGXB4-206ENST00000466438 NPC1L1Q9UHC9 1359 aa19.94■□□□□ 0.78
HMGXB4-206ENST00000466438 FAM155AB1AL88 458 aaPredicted RBP19.93■□□□□ 0.78
HMGXB4-206ENST00000466438 GTF2E1P29083 439 aaPredicted RBP19.93■□□□□ 0.78
HMGXB4-206ENST00000466438 PIP4K2AP48426 406 aaPredicted RBP19.93■□□□□ 0.78
HMGXB4-206ENST00000466438 PANK3Q9H999 370 aa19.93■□□□□ 0.78
HMGXB4-206ENST00000466438 PPIP5K2O43314 1243 aa19.92■□□□□ 0.78
HMGXB4-206ENST00000466438 TRPA1O75762 1119 aa19.92■□□□□ 0.78
HMGXB4-206ENST00000466438 RGMBQ6NW40 437 aa19.92■□□□□ 0.78
HMGXB4-206ENST00000466438 IL17REQ8NFR9 667 aa19.92■□□□□ 0.78
HMGXB4-206ENST00000466438 RNF186Q9NXI6 227 aa19.92■□□□□ 0.78
HMGXB4-206ENST00000466438 HPS5Q9UPZ3 1129 aa19.92■□□□□ 0.78
HMGXB4-206ENST00000466438 HOXA10P31260 410 aaPredicted RBP19.91■□□□□ 0.78
HMGXB4-206ENST00000466438 GMPSP49915 693 aaPredicted RBP19.91■□□□□ 0.78
HMGXB4-206ENST00000466438 HABP4Q5JVS0 413 aaKnown RBP19.91■□□□□ 0.78
HMGXB4-206ENST00000466438 USP16Q9Y5T5 823 aa19.91■□□□□ 0.78
HMGXB4-206ENST00000466438 ABCC12Q96J65 1359 aa19.91■□□□□ 0.78
HMGXB4-206ENST00000466438 HIRAP54198 1017 aaPredicted RBP19.9■□□□□ 0.78
HMGXB4-206ENST00000466438 KIF23Q02241 960 aaPredicted RBP19.9■□□□□ 0.78
HMGXB4-206ENST00000466438 CXCL9Q07325 125 aa19.9■□□□□ 0.78
HMGXB4-206ENST00000466438 MAPK8IP2Q13387 824 aaPredicted RBP19.9■□□□□ 0.78
HMGXB4-206ENST00000466438 RPGRQ92834 1020 aaKnown RBP19.9■□□□□ 0.78
HMGXB4-206ENST00000466438 CCDC102AQ96A19 550 aa19.9■□□□□ 0.78
HMGXB4-206ENST00000466438 VPS33BQ9H267 617 aa19.9■□□□□ 0.78
HMGXB4-206ENST00000466438 ZNRF3Q9ULT6 936 aa19.9■□□□□ 0.78
HMGXB4-206ENST00000466438 RIC1Q4ADV7 1423 aa19.9■□□□□ 0.78
HMGXB4-206ENST00000466438 GNAT3A8MTJ3 354 aa19.89■□□□□ 0.77
HMGXB4-206ENST00000466438 ZEB1P37275 1124 aaPredicted RBP19.89■□□□□ 0.77
HMGXB4-206ENST00000466438 AOC3Q16853 763 aa19.89■□□□□ 0.77
HMGXB4-206ENST00000466438 KIF7Q2M1P5 1343 aa19.89■□□□□ 0.77
HMGXB4-206ENST00000466438 NYXQ9GZU5 481 aa19.89■□□□□ 0.77
HMGXB4-206ENST00000466438 AKAP11Q9UKA4 1901 aa19.89■□□□□ 0.77
HMGXB4-206ENST00000466438 PPEF1O14829 653 aaPredicted RBP19.88■□□□□ 0.77
HMGXB4-206ENST00000466438 TRPM4Q8TD43 1214 aa19.88■□□□□ 0.77
HMGXB4-206ENST00000466438 KCNQ3O43525 872 aa19.87■□□□□ 0.77
HMGXB4-206ENST00000466438 PKN2Q16513 984 aaKnown RBP19.87■□□□□ 0.77
HMGXB4-206ENST00000466438 SLC51AQ86UW1 340 aa19.87■□□□□ 0.77
HMGXB4-206ENST00000466438 CEMIPQ8WUJ3 1361 aa19.86■□□□□ 0.77
HMGXB4-206ENST00000466438 CLSPNQ9HAW4 1339 aa19.86■□□□□ 0.77
HMGXB4-206ENST00000466438 BTBD11A6QL63 1104 aa19.86■□□□□ 0.77
HMGXB4-206ENST00000466438 HLFQ16534 295 aa19.86■□□□□ 0.77
HMGXB4-206ENST00000466438 USP48Q86UV5 1035 aa19.86■□□□□ 0.77
HMGXB4-206ENST00000466438 NUTM1Q86Y26 1132 aa19.86■□□□□ 0.77
HMGXB4-206ENST00000466438 GAS2L2Q8NHY3 880 aa19.86■□□□□ 0.77
HMGXB4-206ENST00000466438 CNKSR2Q8WXI2 1034 aa19.86■□□□□ 0.77
HMGXB4-206ENST00000466438 CRAMP1Q96RY5 1269 aa19.86■□□□□ 0.77
HMGXB4-206ENST00000466438 BCL2L13Q9BXK5 485 aa19.86■□□□□ 0.77
HMGXB4-206ENST00000466438 GBA2Q9HCG7 927 aaPredicted RBP19.86■□□□□ 0.77
HMGXB4-206ENST00000466438 PRAMEF22A3QJZ6 481 aa19.85■□□□□ 0.77
HMGXB4-206ENST00000466438 ZNF157P51786 506 aaPredicted RBP19.85■□□□□ 0.77
HMGXB4-206ENST00000466438 C2orf69Q8N8R5 385 aa19.85■□□□□ 0.77
HMGXB4-206ENST00000466438 RBM17Q96I25 401 aaKnown RBP19.85■□□□□ 0.77
HMGXB4-206ENST00000466438 NBPF26B4DH59 902 aa19.84■□□□□ 0.77
HMGXB4-206ENST00000466438 TCERG1O14776 1098 aaKnown RBP19.84■□□□□ 0.77
HMGXB4-206ENST00000466438 NBPF10Q6P3W6 841 aaKnown RBP19.84■□□□□ 0.77
HMGXB4-206ENST00000466438 CSRNP1Q96S65 589 aa19.84■□□□□ 0.77
HMGXB4-206ENST00000466438 SLC10A3P09131 477 aa19.83■□□□□ 0.77
HMGXB4-206ENST00000466438 SNRPA1P09661 255 aaKnown RBP19.83■□□□□ 0.77
HMGXB4-206ENST00000466438 TNIP1Q15025 636 aa19.83■□□□□ 0.77
HMGXB4-206ENST00000466438 SUPT20HQ8NEM7 779 aa19.83■□□□□ 0.77
HMGXB4-206ENST00000466438 TMX4Q9H1E5 349 aaPredicted RBP19.83■□□□□ 0.77
HMGXB4-206ENST00000466438 DIAPH1O60610 1272 aaKnown RBP19.82■□□□□ 0.76
HMGXB4-206ENST00000466438 NPM3O75607 178 aaKnown RBP19.82■□□□□ 0.76
HMGXB4-206ENST00000466438 DLK2Q6UY11 383 aa19.82■□□□□ 0.76
HMGXB4-206ENST00000466438 REM2Q8IYK8 340 aaPredicted RBP19.82■□□□□ 0.76
HMGXB4-206ENST00000466438 RTFDC1Q9BY42 306 aaPredicted RBP19.82■□□□□ 0.76
HMGXB4-206ENST00000466438 CNOT7Q9UIV1 285 aaKnown RBP19.82■□□□□ 0.76
HMGXB4-206ENST00000466438 IBTKQ9P2D0 1353 aaPredicted RBP19.82■□□□□ 0.76
HMGXB4-206ENST00000466438 H7C1D1 291 aa19.81■□□□□ 0.76
HMGXB4-206ENST00000466438 KRT26Q7Z3Y9 468 aa19.81■□□□□ 0.76
HMGXB4-206ENST00000466438 KNSTRNQ9Y448 316 aa19.81■□□□□ 0.76
HMGXB4-206ENST00000466438 ATP6V0A2Q9Y487 856 aa19.81■□□□□ 0.76
HMGXB4-206ENST00000466438 RAD17O75943 681 aa19.8■□□□□ 0.76
HMGXB4-206ENST00000466438 HDAC9Q9UKV0 1011 aa19.8■□□□□ 0.76
HMGXB4-206ENST00000466438 SHTN1A0MZ66 631 aa19.79■□□□□ 0.76
HMGXB4-206ENST00000466438 MICALL2Q8IY33 904 aa19.79■□□□□ 0.76
HMGXB4-206ENST00000466438 FXR1P51114 621 aaKnown RBP eCLIP19.78■□□□□ 0.76
HMGXB4-206ENST00000466438 KIAA2012Q0VF49 1180 aa19.78■□□□□ 0.76
HMGXB4-206ENST00000466438 ERVV-1B6SEH8 477 aa19.77■□□□□ 0.76
HMGXB4-206ENST00000466438 ADM5C9JUS6 153 aa19.76■□□□□ 0.75
HMGXB4-206ENST00000466438 FBXO46Q6PJ61 603 aaPredicted RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms