RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 DDX19BQ9UMR2 479 aa21.29■■□□□ 1
EXOSC3-203ENST00000465229 RBM19Q9Y4C8 960 aaKnown RBP21.29■■□□□ 1
EXOSC3-203ENST00000465229 BCORQ6W2J9 1755 aa21.29■■□□□ 1
EXOSC3-203ENST00000465229 SCN7AQ01118 1682 aa21.29■■□□□ 1
EXOSC3-203ENST00000465229 TM4SF1P30408 202 aa21.29■■□□□ 1
EXOSC3-203ENST00000465229 AAMPQ13685 434 aa21.29■■□□□ 1
EXOSC3-203ENST00000465229 SETDB2Q96T68 719 aa21.29■■□□□ 1
EXOSC3-203ENST00000465229 IBTKQ9P2D0 1353 aaPredicted RBP21.28■■□□□ 1
EXOSC3-203ENST00000465229 PARP10Q53GL7 1025 aa21.28■■□□□ 1
EXOSC3-203ENST00000465229 SUSD4Q5VX71 490 aa21.28■■□□□ 1
EXOSC3-203ENST00000465229 MEIS3Q99687 375 aa21.28■■□□□ 1
EXOSC3-203ENST00000465229 QSER1Q2KHR3 1735 aa21.28■■□□□ 1
EXOSC3-203ENST00000465229 SOCS7O14512 581 aa21.27■■□□□ 1
EXOSC3-203ENST00000465229 C9orf78Q9NZ63 289 aaPredicted RBP21.27■■□□□ 1
EXOSC3-203ENST00000465229 GRM8O00222 908 aa21.26■□□□□ 0.99
EXOSC3-203ENST00000465229 NBPF7P0C2Y1 421 aaPredicted RBP21.26■□□□□ 0.99
EXOSC3-203ENST00000465229 SLC16A10Q8TF71 515 aa21.26■□□□□ 0.99
EXOSC3-203ENST00000465229 PSDA5PKW4 1024 aaPredicted RBP21.26■□□□□ 0.99
EXOSC3-203ENST00000465229 H7C1W4 665 aa21.26■□□□□ 0.99
EXOSC3-203ENST00000465229 MSL1Q68DK7 614 aa21.26■□□□□ 0.99
EXOSC3-203ENST00000465229 JARID2Q92833 1246 aaPredicted RBP21.26■□□□□ 0.99
EXOSC3-203ENST00000465229 UTYO14607 1347 aa21.25■□□□□ 0.99
EXOSC3-203ENST00000465229 FAM177BA6PVY3 158 aa21.25■□□□□ 0.99
EXOSC3-203ENST00000465229 ZBTB40Q9NUA8 1239 aa21.25■□□□□ 0.99
EXOSC3-203ENST00000465229 TRMT112Q9UI30 125 aaKnown RBP21.25■□□□□ 0.99
EXOSC3-203ENST00000465229 CASP7P55210 303 aa21.24■□□□□ 0.99
EXOSC3-203ENST00000465229 PPP1R42Q7Z4L9 355 aa21.24■□□□□ 0.99
EXOSC3-203ENST00000465229 ZBTB38Q8NAP3 1195 aaPredicted RBP21.24■□□□□ 0.99
EXOSC3-203ENST00000465229 FAM89AQ96GI7 184 aa21.24■□□□□ 0.99
EXOSC3-203ENST00000465229 UTP14AQ9BVJ6 771 aaKnown RBP21.24■□□□□ 0.99
EXOSC3-203ENST00000465229 NTSR2O95665 410 aa21.23■□□□□ 0.99
EXOSC3-203ENST00000465229 PCCAP05165 728 aaPredicted RBP21.23■□□□□ 0.99
EXOSC3-203ENST00000465229 GNAI3P08754 354 aa21.23■□□□□ 0.99
EXOSC3-203ENST00000465229 DDR1Q08345 913 aa21.23■□□□□ 0.99
EXOSC3-203ENST00000465229 RTL5Q5HYW3 569 aaPredicted RBP21.23■□□□□ 0.99
EXOSC3-203ENST00000465229 UBE3BQ7Z3V4 1068 aa21.23■□□□□ 0.99
EXOSC3-203ENST00000465229 SYNE4Q8N205 404 aa21.23■□□□□ 0.99
EXOSC3-203ENST00000465229 KDM2BQ8NHM5 1336 aa21.23■□□□□ 0.99
EXOSC3-203ENST00000465229 ANKRD36CQ5JPF3 1778 aa21.23■□□□□ 0.99
EXOSC3-203ENST00000465229 N4BP2Q86UW6 1770 aaPredicted RBP21.23■□□□□ 0.99
EXOSC3-203ENST00000465229 CENPQQ7L2Z9 268 aaPredicted RBP21.22■□□□□ 0.99
EXOSC3-203ENST00000465229 CHMP4BQ9H444 224 aaKnown RBP21.22■□□□□ 0.99
EXOSC3-203ENST00000465229 CARMIL3Q8ND23 1372 aa21.22■□□□□ 0.99
EXOSC3-203ENST00000465229 POLRMTO00411 1230 aaKnown RBP21.22■□□□□ 0.99
EXOSC3-203ENST00000465229 MMP10P09238 476 aa21.22■□□□□ 0.99
EXOSC3-203ENST00000465229 UBTFL1P0CB47 393 aaPredicted RBP21.22■□□□□ 0.99
EXOSC3-203ENST00000465229 NBPF5PQ86XG9 351 aaPredicted RBP21.22■□□□□ 0.99
EXOSC3-203ENST00000465229 SERPINB2P05120 415 aa21.21■□□□□ 0.99
EXOSC3-203ENST00000465229 TPTE2Q6XPS3 522 aa21.21■□□□□ 0.99
EXOSC3-203ENST00000465229 ZBTB7AO95365 584 aa21.2■□□□□ 0.98
EXOSC3-203ENST00000465229 NUTM1Q86Y26 1132 aa21.2■□□□□ 0.98
EXOSC3-203ENST00000465229 NYXQ9GZU5 481 aa21.2■□□□□ 0.98
EXOSC3-203ENST00000465229 SH3TC1Q8TE82 1336 aa21.19■□□□□ 0.98
EXOSC3-203ENST00000465229 KAZALD1Q96I82 304 aa21.19■□□□□ 0.98
EXOSC3-203ENST00000465229 C1orf115Q9H7X2 142 aa21.19■□□□□ 0.98
EXOSC3-203ENST00000465229 AFDNP55196 1824 aaKnown RBP21.19■□□□□ 0.98
EXOSC3-203ENST00000465229 GNAI2P04899 355 aa21.18■□□□□ 0.98
EXOSC3-203ENST00000465229 ERFEQ4G0M1 354 aa21.18■□□□□ 0.98
EXOSC3-203ENST00000465229 SUCLG2Q96I99 432 aa21.18■□□□□ 0.98
EXOSC3-203ENST00000465229 MTFR1LQ9H019 292 aa21.18■□□□□ 0.98
EXOSC3-203ENST00000465229 LRRFIP2Q9Y608 721 aaKnown RBP21.18■□□□□ 0.98
EXOSC3-203ENST00000465229 IRS4O14654 1257 aaPredicted RBP21.18■□□□□ 0.98
EXOSC3-203ENST00000465229 PARP3Q9Y6F1 533 aa21.18■□□□□ 0.98
EXOSC3-203ENST00000465229 CDHR2Q9BYE9 1310 aa21.17■□□□□ 0.98
EXOSC3-203ENST00000465229 GTF2E1P29083 439 aaPredicted RBP21.17■□□□□ 0.98
EXOSC3-203ENST00000465229 PRR5LQ6MZQ0 368 aa21.17■□□□□ 0.98
EXOSC3-203ENST00000465229 ATF5Q9Y2D1 282 aaPredicted RBP21.17■□□□□ 0.98
EXOSC3-203ENST00000465229 CASZ1Q86V15 1759 aa21.16■□□□□ 0.98
EXOSC3-203ENST00000465229 HCLS1P14317 486 aaPredicted RBP21.16■□□□□ 0.98
EXOSC3-203ENST00000465229 EPHA10Q5JZY3 1008 aa21.16■□□□□ 0.98
EXOSC3-203ENST00000465229 SLC10A5Q5PT55 438 aa21.16■□□□□ 0.98
EXOSC3-203ENST00000465229 CCDC24Q8N4L8 307 aa21.16■□□□□ 0.98
EXOSC3-203ENST00000465229 CNBD1Q8NA66 436 aa21.16■□□□□ 0.98
EXOSC3-203ENST00000465229 HDAC5Q9UQL6 1122 aa21.16■□□□□ 0.98
EXOSC3-203ENST00000465229 COL24A1Q17RW2 1714 aa21.16■□□□□ 0.98
EXOSC3-203ENST00000465229 PLA2G12BQ9BX93 195 aa21.15■□□□□ 0.98
EXOSC3-203ENST00000465229 NPHP1O15259 732 aa21.15■□□□□ 0.98
EXOSC3-203ENST00000465229 FOXO4P98177 505 aa21.15■□□□□ 0.98
EXOSC3-203ENST00000465229 BICC1Q9H694 974 aaKnown RBP21.15■□□□□ 0.98
EXOSC3-203ENST00000465229 PCDHB15Q9Y5E8 787 aa21.15■□□□□ 0.98
EXOSC3-203ENST00000465229 ABCC12Q96J65 1359 aa21.14■□□□□ 0.97
EXOSC3-203ENST00000465229 PDE8AO60658 829 aa21.13■□□□□ 0.97
EXOSC3-203ENST00000465229 ANKRD44Q8N8A2 993 aa21.13■□□□□ 0.97
EXOSC3-203ENST00000465229 HSP90B1P14625 803 aaKnown RBP21.12■□□□□ 0.97
EXOSC3-203ENST00000465229 RABL6Q3YEC7 729 aaPredicted RBP21.12■□□□□ 0.97
EXOSC3-203ENST00000465229 ST5P78524 1137 aa21.11■□□□□ 0.97
EXOSC3-203ENST00000465229 CEP85Q6P2H3 762 aa21.11■□□□□ 0.97
EXOSC3-203ENST00000465229 CSF1RP07333 972 aa21.11■□□□□ 0.97
EXOSC3-203ENST00000465229 LMBR1LQ6UX01 489 aa21.11■□□□□ 0.97
EXOSC3-203ENST00000465229 C3orf67Q6ZVT6 689 aa21.11■□□□□ 0.97
EXOSC3-203ENST00000465229 SIRT2Q8IXJ6 389 aa21.11■□□□□ 0.97
EXOSC3-203ENST00000465229 SGIP1Q9BQI5 828 aa21.11■□□□□ 0.97
EXOSC3-203ENST00000465229 POLD1P28340 1107 aa21.1■□□□□ 0.97
EXOSC3-203ENST00000465229 CTSWP56202 376 aa21.1■□□□□ 0.97
EXOSC3-203ENST00000465229 ATP8B2P98198 1209 aa21.1■□□□□ 0.97
EXOSC3-203ENST00000465229 RPAP2Q8IXW5 612 aaPredicted RBP21.1■□□□□ 0.97
EXOSC3-203ENST00000465229 TTLL11Q8NHH1 800 aa21.1■□□□□ 0.97
EXOSC3-203ENST00000465229 PTGER2P43116 358 aa21.09■□□□□ 0.97
EXOSC3-203ENST00000465229 MTX1Q13505 466 aa21.09■□□□□ 0.97
EXOSC3-203ENST00000465229 NLRP3Q96P20 1036 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms