RNA–Protein interactions for RNA: ENST00000464279.5

SNX17-205, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 549 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-205ENST00000464279 NIM1KQ8IY84 436 aa17.09■□□□□ 0.33
SNX17-205ENST00000464279 HDAC9Q9UKV0 1011 aa17.09■□□□□ 0.33
SNX17-205ENST00000464279 CUL9Q8IWT3 2517 aa17.09■□□□□ 0.33
SNX17-205ENST00000464279 RNMTO43148 476 aaKnown RBP17.08■□□□□ 0.32
SNX17-205ENST00000464279 CDCA8Q53HL2 280 aa17.08■□□□□ 0.32
SNX17-205ENST00000464279 TTC5Q8N0Z6 440 aa17.08■□□□□ 0.32
SNX17-205ENST00000464279 UBR2Q8IWV8 1755 aa17.07■□□□□ 0.32
SNX17-205ENST00000464279 CDHR2Q9BYE9 1310 aa17.06■□□□□ 0.32
SNX17-205ENST00000464279 ZNF157P51786 506 aaPredicted RBP17.06■□□□□ 0.32
SNX17-205ENST00000464279 SULT6B1Q6IMI4 303 aa17.06■□□□□ 0.32
SNX17-205ENST00000464279 SLC17A8Q8NDX2 589 aa17.06■□□□□ 0.32
SNX17-205ENST00000464279 GBA2Q9HCG7 927 aaPredicted RBP17.06■□□□□ 0.32
SNX17-205ENST00000464279 GMPSP49915 693 aaPredicted RBP17.05■□□□□ 0.32
SNX17-205ENST00000464279 GRIPAP1Q4V328 841 aa17.05■□□□□ 0.32
SNX17-205ENST00000464279 FBXO46Q6PJ61 603 aaPredicted RBP17.05■□□□□ 0.32
SNX17-205ENST00000464279 TPTE2Q6XPS3 522 aa17.05■□□□□ 0.32
SNX17-205ENST00000464279 DZIP3Q86Y13 1208 aaKnown RBP17.05■□□□□ 0.32
SNX17-205ENST00000464279 CSRNP1Q96S65 589 aa17.05■□□□□ 0.32
SNX17-205ENST00000464279 TEX13AQ9BXU3 409 aaPredicted RBP17.05■□□□□ 0.32
SNX17-205ENST00000464279 AKAP11Q9UKA4 1901 aa17.05■□□□□ 0.32
SNX17-205ENST00000464279 NPC1L1Q9UHC9 1359 aa17.04■□□□□ 0.32
SNX17-205ENST00000464279 SLC10A3P09131 477 aa17.04■□□□□ 0.32
SNX17-205ENST00000464279 USP48Q86UV5 1035 aa17.04■□□□□ 0.32
SNX17-205ENST00000464279 C2orf69Q8N8R5 385 aa17.04■□□□□ 0.32
SNX17-205ENST00000464279 ZNF652Q9Y2D9 606 aa17.04■□□□□ 0.32
SNX17-205ENST00000464279 HEG1Q9ULI3 1381 aa17.03■□□□□ 0.32
SNX17-205ENST00000464279 PPIP5K2O43314 1243 aa17.03■□□□□ 0.32
SNX17-205ENST00000464279 HIRAP54198 1017 aaPredicted RBP17.03■□□□□ 0.32
SNX17-205ENST00000464279 CLEC4GQ6UXB4 293 aa17.03■□□□□ 0.32
SNX17-205ENST00000464279 REM2Q8IYK8 340 aaPredicted RBP17.03■□□□□ 0.32
SNX17-205ENST00000464279 TRPM4Q8TD43 1214 aa17.03■□□□□ 0.32
SNX17-205ENST00000464279 ZNF296Q8WUU4 475 aaPredicted RBP17.03■□□□□ 0.32
SNX17-205ENST00000464279 ZNF496Q96IT1 587 aaPredicted RBP17.02■□□□□ 0.32
SNX17-205ENST00000464279 COLQQ9Y215 455 aaPredicted RBP17.02■□□□□ 0.32
SNX17-205ENST00000464279 A1BGP04217 495 aa17.01■□□□□ 0.31
SNX17-205ENST00000464279 CXCL9Q07325 125 aa17.01■□□□□ 0.31
SNX17-205ENST00000464279 TRIOBPQ9H2D6 2365 aa17■□□□□ 0.31
SNX17-205ENST00000464279 AOC3Q16853 763 aa17■□□□□ 0.31
SNX17-205ENST00000464279 DLK2Q6UY11 383 aa17■□□□□ 0.31
SNX17-205ENST00000464279 BCL2L13Q9BXK5 485 aa17■□□□□ 0.31
SNX17-205ENST00000464279 ZNRF3Q9ULT6 936 aa17■□□□□ 0.31
SNX17-205ENST00000464279 CRY2Q49AN0 593 aa16.99■□□□□ 0.31
SNX17-205ENST00000464279 KRT26Q7Z3Y9 468 aa16.99■□□□□ 0.31
SNX17-205ENST00000464279 NIP7Q9Y221 180 aaKnown RBP eCLIP16.99■□□□□ 0.31
SNX17-205ENST00000464279 FAM177BA6PVY3 158 aa16.98■□□□□ 0.31
SNX17-205ENST00000464279 GTF2E1P29083 439 aaPredicted RBP16.98■□□□□ 0.31
SNX17-205ENST00000464279 VPS33BQ9H267 617 aa16.97■□□□□ 0.31
SNX17-205ENST00000464279 MKI67P46013 3256 aaKnown RBP16.97■□□□□ 0.31
SNX17-205ENST00000464279 POTEFA5A3E0 1075 aa16.96■□□□□ 0.31
SNX17-205ENST00000464279 ZNF790Q6PG37 636 aa16.96■□□□□ 0.31
SNX17-205ENST00000464279 RASAL3Q86YV0 1011 aa16.96■□□□□ 0.31
SNX17-205ENST00000464279 RPGRQ92834 1020 aaKnown RBP16.96■□□□□ 0.31
SNX17-205ENST00000464279 ABCC12Q96J65 1359 aa16.95■□□□□ 0.3
SNX17-205ENST00000464279 H7C1D1 291 aa16.95■□□□□ 0.3
SNX17-205ENST00000464279 PPEF1O14829 653 aaPredicted RBP16.95■□□□□ 0.3
SNX17-205ENST00000464279 TBC1D8O95759 1140 aa16.95■□□□□ 0.3
SNX17-205ENST00000464279 TNIP1Q15025 636 aa16.95■□□□□ 0.3
SNX17-205ENST00000464279 NOM1Q5C9Z4 860 aaKnown RBP16.95■□□□□ 0.3
SNX17-205ENST00000464279 INTS3Q68E01 1043 aaKnown RBP16.95■□□□□ 0.3
SNX17-205ENST00000464279 CNOT7Q9UIV1 285 aaKnown RBP16.95■□□□□ 0.3
SNX17-205ENST00000464279 ADM5C9JUS6 153 aa16.94■□□□□ 0.3
SNX17-205ENST00000464279 GPR25O00155 361 aa16.94■□□□□ 0.3
SNX17-205ENST00000464279 RGL2O15211 777 aa16.94■□□□□ 0.3
SNX17-205ENST00000464279 HOXA10P31260 410 aaPredicted RBP16.94■□□□□ 0.3
SNX17-205ENST00000464279 SLC51AQ86UW1 340 aa16.94■□□□□ 0.3
SNX17-205ENST00000464279 MICALL2Q8IY33 904 aa16.94■□□□□ 0.3
SNX17-205ENST00000464279 FMNL2Q96PY5 1086 aa16.94■□□□□ 0.3
SNX17-205ENST00000464279 RIC1Q4ADV7 1423 aa16.94■□□□□ 0.3
SNX17-205ENST00000464279 KIF7Q2M1P5 1343 aa16.94■□□□□ 0.3
SNX17-205ENST00000464279 SZT2Q5T011 3432 aa16.93■□□□□ 0.3
SNX17-205ENST00000464279 SHTN1A0MZ66 631 aa16.93■□□□□ 0.3
SNX17-205ENST00000464279 TCERG1O14776 1098 aaKnown RBP16.93■□□□□ 0.3
SNX17-205ENST00000464279 RAD17O75943 681 aa16.93■□□□□ 0.3
SNX17-205ENST00000464279 PIP4K2AP48426 406 aaPredicted RBP16.92■□□□□ 0.3
SNX17-205ENST00000464279 SUPT20HQ8NEM7 779 aa16.92■□□□□ 0.3
SNX17-205ENST00000464279 DCPSQ96C86 337 aaKnown RBP16.92■□□□□ 0.3
SNX17-205ENST00000464279 TMX4Q9H1E5 349 aaPredicted RBP16.92■□□□□ 0.3
SNX17-205ENST00000464279 IL13P35225 146 aa16.91■□□□□ 0.3
SNX17-205ENST00000464279 TEFQ10587 303 aa16.91■□□□□ 0.3
SNX17-205ENST00000464279 RBM17Q96I25 401 aaKnown RBP16.91■□□□□ 0.3
SNX17-205ENST00000464279 CRAMP1Q96RY5 1269 aa16.91■□□□□ 0.3
SNX17-205ENST00000464279 NYXQ9GZU5 481 aa16.91■□□□□ 0.3
SNX17-205ENST00000464279 CEP290O15078 2479 aa16.9■□□□□ 0.3
SNX17-205ENST00000464279 FKTNO75072 461 aa16.9■□□□□ 0.3
SNX17-205ENST00000464279 EIF4G2P78344 907 aaKnown RBP eCLIP16.9■□□□□ 0.3
SNX17-205ENST00000464279 MTHFSDQ2M296 383 aaKnown RBP16.9■□□□□ 0.3
SNX17-205ENST00000464279 MNX1P50219 401 aaPredicted RBP16.89■□□□□ 0.29
SNX17-205ENST00000464279 SAMD7Q7Z3H4 446 aa16.89■□□□□ 0.29
SNX17-205ENST00000464279 NUTM1Q86Y26 1132 aa16.89■□□□□ 0.29
SNX17-205ENST00000464279 RTFDC1Q9BY42 306 aaPredicted RBP16.89■□□□□ 0.29
SNX17-205ENST00000464279 RBBP6Q7Z6E9 1792 aaKnown RBP16.88■□□□□ 0.29
SNX17-205ENST00000464279 HSPA5P11021 654 aaKnown RBP16.88■□□□□ 0.29
SNX17-205ENST00000464279 KIAA2012Q0VF49 1180 aa16.88■□□□□ 0.29
SNX17-205ENST00000464279 TBC1D10BQ4KMP7 808 aaPredicted RBP16.88■□□□□ 0.29
SNX17-205ENST00000464279 A0A0C4DFX4 3053 aa16.88■□□□□ 0.29
SNX17-205ENST00000464279 KIAA0100Q14667 2235 aaKnown RBP16.87■□□□□ 0.29
SNX17-205ENST00000464279 SULF1Q8IWU6 871 aa16.87■□□□□ 0.29
SNX17-205ENST00000464279 DPF2Q92785 391 aa16.87■□□□□ 0.29
SNX17-205ENST00000464279 OTUD5Q96G74 571 aa16.87■□□□□ 0.29
SNX17-205ENST00000464279 ATP6V0A2Q9Y487 856 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms