RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 TCIRG1Q13488 830 aa26.47■■□□□ 1.83
PDLIM2-216ENST00000464275 BARGINQ6ZT62 677 aa26.47■■□□□ 1.83
PDLIM2-216ENST00000464275 KLHDC4Q8TBB5 520 aa26.47■■□□□ 1.83
PDLIM2-216ENST00000464275 SYTL4Q96C24 671 aaPredicted RBP26.47■■□□□ 1.83
PDLIM2-216ENST00000464275 MAP4K4O95819 1239 aaPredicted RBP26.46■■□□□ 1.83
PDLIM2-216ENST00000464275 SPRYD3Q8NCJ5 442 aa26.46■■□□□ 1.83
PDLIM2-216ENST00000464275 EAF2Q96CJ1 260 aaPredicted RBP26.46■■□□□ 1.83
PDLIM2-216ENST00000464275 UBAP1LF5GYI3 381 aa26.45■■□□□ 1.82
PDLIM2-216ENST00000464275 K7ELQ4 463 aaPredicted RBP26.45■■□□□ 1.82
PDLIM2-216ENST00000464275 CYP19A1P11511 503 aaPredicted RBP26.45■■□□□ 1.82
PDLIM2-216ENST00000464275 TRIM28Q13263 835 aaKnown RBP26.45■■□□□ 1.82
PDLIM2-216ENST00000464275 LMBR1LQ6UX01 489 aa26.45■■□□□ 1.82
PDLIM2-216ENST00000464275 SLC4A9Q96Q91 983 aa26.45■■□□□ 1.82
PDLIM2-216ENST00000464275 MCCP23508 829 aa26.44■■□□□ 1.82
PDLIM2-216ENST00000464275 ZNF330Q9Y3S2 320 aaPredicted RBP26.44■■□□□ 1.82
PDLIM2-216ENST00000464275 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.44■■□□□ 1.82
PDLIM2-216ENST00000464275 CICQ96RK0 1608 aaPredicted RBP26.43■■□□□ 1.82
PDLIM2-216ENST00000464275 CHMP5Q9NZZ3 219 aa26.43■■□□□ 1.82
PDLIM2-216ENST00000464275 MAP3K15Q6ZN16 1313 aa26.43■■□□□ 1.82
PDLIM2-216ENST00000464275 CD2BP2O95400 341 aaKnown RBP26.42■■□□□ 1.82
PDLIM2-216ENST00000464275 CCDC8Q9H0W5 538 aaPredicted RBP26.42■■□□□ 1.82
PDLIM2-216ENST00000464275 CCDC9Q9Y3X0 531 aaKnown RBP26.42■■□□□ 1.82
PDLIM2-216ENST00000464275 ANO2Q9NQ90 1003 aa26.42■■□□□ 1.82
PDLIM2-216ENST00000464275 MYH3P11055 1940 aa26.42■■□□□ 1.82
PDLIM2-216ENST00000464275 MARCH10Q8NA82 808 aaPredicted RBP26.41■■□□□ 1.82
PDLIM2-216ENST00000464275 EVI5LQ96CN4 794 aa26.4■■□□□ 1.82
PDLIM2-216ENST00000464275 GIGYF2Q6Y7W6 1299 aaKnown RBP26.4■■□□□ 1.82
PDLIM2-216ENST00000464275 JCADQ9P266 1359 aa26.39■■□□□ 1.82
PDLIM2-216ENST00000464275 SGSM2O43147 1006 aa26.39■■□□□ 1.82
PDLIM2-216ENST00000464275 ANAPC15P60006 121 aa26.39■■□□□ 1.82
PDLIM2-216ENST00000464275 CHMP3Q9Y3E7 222 aa26.39■■□□□ 1.82
PDLIM2-216ENST00000464275 RREB1Q92766 1687 aa26.39■■□□□ 1.81
PDLIM2-216ENST00000464275 HSP90AB3PQ58FF7 597 aa26.38■■□□□ 1.81
PDLIM2-216ENST00000464275 ST18O60284 1047 aa26.38■■□□□ 1.81
PDLIM2-216ENST00000464275 TFCP2Q12800 502 aa26.38■■□□□ 1.81
PDLIM2-216ENST00000464275 TNNI3KQ59H18 835 aa26.38■■□□□ 1.81
PDLIM2-216ENST00000464275 TLR7Q9NYK1 1049 aaKnown RBP26.38■■□□□ 1.81
PDLIM2-216ENST00000464275 FPGT-TNNI3KV9GXZ4 949 aa26.38■■□□□ 1.81
PDLIM2-216ENST00000464275 PCCAP05165 728 aaPredicted RBP26.37■■□□□ 1.81
PDLIM2-216ENST00000464275 RUFY2Q8WXA3 655 aa26.37■■□□□ 1.81
PDLIM2-216ENST00000464275 ZBTB1Q9Y2K1 713 aa26.37■■□□□ 1.81
PDLIM2-216ENST00000464275 DDIT3P35638 169 aa26.37■■□□□ 1.81
PDLIM2-216ENST00000464275 IL6STP40189 918 aaPredicted RBP26.37■■□□□ 1.81
PDLIM2-216ENST00000464275 IL17RAQ96F46 866 aa26.37■■□□□ 1.81
PDLIM2-216ENST00000464275 DIAPH3Q9NSV4 1193 aa26.37■■□□□ 1.81
PDLIM2-216ENST00000464275 ARXQ96QS3 562 aa26.35■■□□□ 1.81
PDLIM2-216ENST00000464275 PLA2G12BQ9BX93 195 aa26.35■■□□□ 1.81
PDLIM2-216ENST00000464275 IL25Q9H293 177 aa26.35■■□□□ 1.81
PDLIM2-216ENST00000464275 CIZ1Q9ULV3 898 aaPredicted RBP26.35■■□□□ 1.81
PDLIM2-216ENST00000464275 HSP90AA1P07900 732 aaKnown RBP26.35■■□□□ 1.81
PDLIM2-216ENST00000464275 ACSBG1Q96GR2 724 aa26.35■■□□□ 1.81
PDLIM2-216ENST00000464275 HIP1O00291 1037 aa26.34■■□□□ 1.81
PDLIM2-216ENST00000464275 ZNF831Q5JPB2 1677 aa26.34■■□□□ 1.81
PDLIM2-216ENST00000464275 ZBTB38Q8NAP3 1195 aaPredicted RBP26.34■■□□□ 1.81
PDLIM2-216ENST00000464275 VPS72Q15906 364 aa26.33■■□□□ 1.81
PDLIM2-216ENST00000464275 CDHR2Q9BYE9 1310 aa26.33■■□□□ 1.81
PDLIM2-216ENST00000464275 ERVV-1B6SEH8 477 aa26.33■■□□□ 1.8
PDLIM2-216ENST00000464275 HLFQ16534 295 aa26.33■■□□□ 1.8
PDLIM2-216ENST00000464275 CWC27Q6UX04 472 aaKnown RBP26.33■■□□□ 1.8
PDLIM2-216ENST00000464275 NGLY1Q96IV0 654 aa26.33■■□□□ 1.8
PDLIM2-216ENST00000464275 GPR108Q9NPR9 543 aa26.33■■□□□ 1.8
PDLIM2-216ENST00000464275 BCL9LQ86UU0 1499 aa26.32■■□□□ 1.8
PDLIM2-216ENST00000464275 RAD50Q92878 1312 aa26.32■■□□□ 1.8
PDLIM2-216ENST00000464275 ATP5JP18859 108 aa26.32■■□□□ 1.8
PDLIM2-216ENST00000464275 IL15P40933 162 aaPredicted RBP26.32■■□□□ 1.8
PDLIM2-216ENST00000464275 KIAA1211Q6ZU35 1233 aa26.32■■□□□ 1.8
PDLIM2-216ENST00000464275 ATG9AQ7Z3C6 839 aa26.32■■□□□ 1.8
PDLIM2-216ENST00000464275 DBNLQ9UJU6 430 aaKnown RBP26.32■■□□□ 1.8
PDLIM2-216ENST00000464275 MYH14Q7Z406 1995 aaKnown RBP26.32■■□□□ 1.8
PDLIM2-216ENST00000464275 COL5A3P25940 1745 aaPredicted RBP26.32■■□□□ 1.8
PDLIM2-216ENST00000464275 A0A0G2JS52 829 aa26.31■■□□□ 1.8
PDLIM2-216ENST00000464275 CIAO1O76071 339 aa26.31■■□□□ 1.8
PDLIM2-216ENST00000464275 HSPA4P34932 840 aa26.31■■□□□ 1.8
PDLIM2-216ENST00000464275 IL27Q8NEV9 243 aa26.31■■□□□ 1.8
PDLIM2-216ENST00000464275 LSG1Q9H089 658 aaKnown RBP26.31■■□□□ 1.8
PDLIM2-216ENST00000464275 BOLA2Q9H3K6 86 aa26.31■■□□□ 1.8
PDLIM2-216ENST00000464275 EYA2O00167 538 aa26.31■■□□□ 1.8
PDLIM2-216ENST00000464275 L1TD1Q5T7N2 865 aaKnown RBP26.31■■□□□ 1.8
PDLIM2-216ENST00000464275 C8orf37Q96NL8 207 aa26.31■■□□□ 1.8
PDLIM2-216ENST00000464275 PALD1Q9ULE6 856 aa26.31■■□□□ 1.8
PDLIM2-216ENST00000464275 NLRP10Q86W26 655 aa26.3■■□□□ 1.8
PDLIM2-216ENST00000464275 DZIP3Q86Y13 1208 aaKnown RBP26.3■■□□□ 1.8
PDLIM2-216ENST00000464275 MCM4P33991 863 aa26.29■■□□□ 1.8
PDLIM2-216ENST00000464275 ATP6V1AP38606 617 aa26.29■■□□□ 1.8
PDLIM2-216ENST00000464275 SMARCC1Q92922 1105 aaPredicted RBP26.29■■□□□ 1.8
PDLIM2-216ENST00000464275 FBXO3Q9UK99 471 aa26.29■■□□□ 1.8
PDLIM2-216ENST00000464275 FAM89AQ96GI7 184 aa26.29■■□□□ 1.8
PDLIM2-216ENST00000464275 CCDC87Q9NVE4 849 aa26.29■■□□□ 1.8
PDLIM2-216ENST00000464275 LOC102724428A0A0B4J2F2 783 aa26.28■■□□□ 1.8
PDLIM2-216ENST00000464275 SIK1P57059 783 aa26.28■■□□□ 1.8
PDLIM2-216ENST00000464275 CCDC57Q2TAC2 916 aa26.28■■□□□ 1.8
PDLIM2-216ENST00000464275 CSF1RP07333 972 aa26.27■■□□□ 1.8
PDLIM2-216ENST00000464275 MCM2P49736 904 aa26.27■■□□□ 1.8
PDLIM2-216ENST00000464275 EIF5P55010 431 aaKnown RBP26.27■■□□□ 1.8
PDLIM2-216ENST00000464275 FAM98CQ17RN3 349 aaKnown RBP26.27■■□□□ 1.8
PDLIM2-216ENST00000464275 SPATA31A6Q5VVP1 1343 aa26.27■■□□□ 1.8
PDLIM2-216ENST00000464275 NEK4P51957 841 aa26.27■■□□□ 1.8
PDLIM2-216ENST00000464275 INTS5Q6P9B9 1019 aaKnown RBP26.27■■□□□ 1.8
PDLIM2-216ENST00000464275 FNBP4Q8N3X1 1017 aaPredicted RBP26.27■■□□□ 1.8
PDLIM2-216ENST00000464275 DBNDD2Q9BQY9 259 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms