RNA–Protein interactions for RNA: ENST00000463222.1

VRK2-208, Transcript of vaccinia related kinase 2, humanhuman

TSL 3

Gene VRK2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-208ENST00000463222 DAB2P98082 770 aa7.24□□□□□ -1.25
VRK2-208ENST00000463222 HDLBPQ00341 1268 aaKnown RBP7.24□□□□□ -1.25
VRK2-208ENST00000463222 C8orf34Q49A92 452 aa7.24□□□□□ -1.25
VRK2-208ENST00000463222 C4orf17Q53FE4 359 aa7.24□□□□□ -1.25
VRK2-208ENST00000463222 C1orf53Q5VUE5 145 aa7.24□□□□□ -1.25
VRK2-208ENST00000463222 NUDT16Q96DE0 195 aaKnown RBP7.24□□□□□ -1.25
VRK2-208ENST00000463222 INSM2Q96T92 566 aaPredicted RBP7.24□□□□□ -1.25
VRK2-208ENST00000463222 SOS2Q07890 1332 aaPredicted RBP7.24□□□□□ -1.25
VRK2-208ENST00000463222 SORBS3O60504 671 aa7.23□□□□□ -1.25
VRK2-208ENST00000463222 PPFIA3O75145 1194 aa7.23□□□□□ -1.25
VRK2-208ENST00000463222 MICAL2O94851 1124 aa7.23□□□□□ -1.25
VRK2-208ENST00000463222 ERCC5P28715 1186 aaPredicted RBP7.23□□□□□ -1.25
VRK2-208ENST00000463222 USP5P45974 858 aa7.23□□□□□ -1.25
VRK2-208ENST00000463222 KCNMA1Q12791 1236 aa7.23□□□□□ -1.25
VRK2-208ENST00000463222 ORC1Q13415 861 aa7.23□□□□□ -1.25
VRK2-208ENST00000463222 ENOX2Q16206 610 aaKnown RBP7.23□□□□□ -1.25
VRK2-208ENST00000463222 GNASQ5JWF2 1037 aa7.23□□□□□ -1.25
VRK2-208ENST00000463222 C6orf118Q5T5N4 469 aa7.23□□□□□ -1.25
VRK2-208ENST00000463222 TMC4Q7Z404 712 aa7.23□□□□□ -1.25
VRK2-208ENST00000463222 RHPN1Q8TCX5 695 aa7.23□□□□□ -1.25
VRK2-208ENST00000463222 VTI1BQ9UEU0 232 aa7.23□□□□□ -1.25
VRK2-208ENST00000463222 SCAMP3O14828 347 aaKnown RBP7.22□□□□□ -1.25
VRK2-208ENST00000463222 BMP2P12643 396 aa7.22□□□□□ -1.25
VRK2-208ENST00000463222 PCSK2P16519 638 aa7.22□□□□□ -1.25
VRK2-208ENST00000463222 FGD1P98174 961 aa7.22□□□□□ -1.25
VRK2-208ENST00000463222 ZNF280CQ8ND82 737 aa7.22□□□□□ -1.25
VRK2-208ENST00000463222 C7orf43Q8WVR3 580 aa7.22□□□□□ -1.25
VRK2-208ENST00000463222 POLMQ9NP87 494 aaPredicted RBP7.22□□□□□ -1.25
VRK2-208ENST00000463222 USP20Q9Y2K6 914 aa7.22□□□□□ -1.25
VRK2-208ENST00000463222 OPLAHO14841 1288 aa7.21□□□□□ -1.26
VRK2-208ENST00000463222 RNF144AP50876 292 aaPredicted RBP7.21□□□□□ -1.26
VRK2-208ENST00000463222 ZC3H6P61129 1189 aaKnown RBP7.21□□□□□ -1.26
VRK2-208ENST00000463222 NAALADL2Q58DX5 795 aa7.21□□□□□ -1.26
VRK2-208ENST00000463222 ALG1LQ6GMV1 187 aa7.21□□□□□ -1.26
VRK2-208ENST00000463222 TTC16Q8NEE8 873 aa7.21□□□□□ -1.26
VRK2-208ENST00000463222 C8orf37Q96NL8 207 aa7.21□□□□□ -1.26
VRK2-208ENST00000463222 CSRNP1Q96S65 589 aa7.21□□□□□ -1.26
VRK2-208ENST00000463222 CFHR5Q9BXR6 569 aa7.21□□□□□ -1.26
VRK2-208ENST00000463222 DNMT3LQ9UJW3 386 aa7.21□□□□□ -1.26
VRK2-208ENST00000463222 CTSOP43234 321 aaPredicted RBP7.2□□□□□ -1.26
VRK2-208ENST00000463222 GSK3AP49840 483 aa7.2□□□□□ -1.26
VRK2-208ENST00000463222 POU4F2Q12837 409 aa7.2□□□□□ -1.26
VRK2-208ENST00000463222 HSH2DQ96JZ2 352 aa7.2□□□□□ -1.26
VRK2-208ENST00000463222 SUSD3Q96L08 255 aa7.2□□□□□ -1.26
VRK2-208ENST00000463222 TSEN34Q9BSV6 310 aaKnown RBP7.2□□□□□ -1.26
VRK2-208ENST00000463222 PPP1R1BQ9UD71 204 aaPredicted RBP7.2□□□□□ -1.26
VRK2-208ENST00000463222 EIF1AYO14602 144 aaKnown RBP7.19□□□□□ -1.26
VRK2-208ENST00000463222 GPC1P35052 558 aa7.19□□□□□ -1.26
VRK2-208ENST00000463222 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.19□□□□□ -1.26
VRK2-208ENST00000463222 NBPF1Q3BBV0 1214 aa7.19□□□□□ -1.26
VRK2-208ENST00000463222 BICDL1Q6ZP65 573 aa7.19□□□□□ -1.26
VRK2-208ENST00000463222 PRICKLE2Q7Z3G6 844 aa7.19□□□□□ -1.26
VRK2-208ENST00000463222 PIK3R5Q8WYR1 880 aa7.19□□□□□ -1.26
VRK2-208ENST00000463222 DRC1Q96MC2 740 aa7.19□□□□□ -1.26
VRK2-208ENST00000463222 IDH3AP50213 366 aa7.18□□□□□ -1.26
VRK2-208ENST00000463222 METTL16Q86W50 562 aaKnown RBP7.18□□□□□ -1.26
VRK2-208ENST00000463222 NT5DC4Q86YG4 428 aa7.18□□□□□ -1.26
VRK2-208ENST00000463222 FAM13BQ9NYF5 915 aa7.18□□□□□ -1.26
VRK2-208ENST00000463222 DMGDHQ9UI17 866 aaKnown RBP7.18□□□□□ -1.26
VRK2-208ENST00000463222 TGFBR3LH3BV60 316 aa7.17□□□□□ -1.26
VRK2-208ENST00000463222 RNF225M0QZC1 329 aaPredicted RBP7.17□□□□□ -1.26
VRK2-208ENST00000463222 SPINT1O43278 529 aa7.17□□□□□ -1.26
VRK2-208ENST00000463222 TATP17735 454 aaPredicted RBP7.17□□□□□ -1.26
VRK2-208ENST00000463222 GNA15P30679 374 aa7.17□□□□□ -1.26
VRK2-208ENST00000463222 RAD51AP2Q09MP3 1159 aa7.17□□□□□ -1.26
VRK2-208ENST00000463222 USPL1Q5W0Q7 1092 aa7.17□□□□□ -1.26
VRK2-208ENST00000463222 CMTR1Q8N1G2 835 aaKnown RBP7.17□□□□□ -1.26
VRK2-208ENST00000463222 SREK1Q8WXA9 508 aaKnown RBP7.17□□□□□ -1.26
VRK2-208ENST00000463222 RNF34Q969K3 372 aa7.17□□□□□ -1.26
VRK2-208ENST00000463222 FOXD3Q9UJU5 478 aaPredicted RBP7.17□□□□□ -1.26
VRK2-208ENST00000463222 TTLL8A6PVC2 850 aa7.16□□□□□ -1.26
VRK2-208ENST00000463222 SPATA31C2B4DYI2 1134 aa7.16□□□□□ -1.26
VRK2-208ENST00000463222 NEFLP07196 543 aa7.16□□□□□ -1.26
VRK2-208ENST00000463222 KRT76Q01546 638 aa7.16□□□□□ -1.26
VRK2-208ENST00000463222 NBPF10Q6P3W6 841 aaKnown RBP7.16□□□□□ -1.26
VRK2-208ENST00000463222 LRRC69Q6ZNQ3 347 aa7.16□□□□□ -1.26
VRK2-208ENST00000463222 NANOS1Q8WY41 292 aaKnown RBP7.16□□□□□ -1.26
VRK2-208ENST00000463222 NEUROD4Q9HD90 331 aa7.16□□□□□ -1.26
VRK2-208ENST00000463222 ZDHHC3Q9NYG2 299 aa7.16□□□□□ -1.26
VRK2-208ENST00000463222 AK5Q9Y6K8 562 aa7.16□□□□□ -1.26
VRK2-208ENST00000463222 CPNE3O75131 537 aaKnown RBP7.15□□□□□ -1.26
VRK2-208ENST00000463222 RPLP1P05386 114 aaKnown RBP7.15□□□□□ -1.26
VRK2-208ENST00000463222 CTSHP09668 335 aa7.15□□□□□ -1.26
VRK2-208ENST00000463222 RHOQP17081 205 aa7.15□□□□□ -1.26
VRK2-208ENST00000463222 ITGAEP38570 1179 aa7.15□□□□□ -1.26
VRK2-208ENST00000463222 FANCCQ00597 558 aa7.15□□□□□ -1.26
VRK2-208ENST00000463222 SUZ12Q15022 739 aaKnown RBP7.15□□□□□ -1.26
VRK2-208ENST00000463222 HIF1AQ16665 826 aa7.15□□□□□ -1.26
VRK2-208ENST00000463222 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.15□□□□□ -1.26
VRK2-208ENST00000463222 ARSJQ5FYB0 599 aaPredicted RBP7.15□□□□□ -1.26
VRK2-208ENST00000463222 PI16Q6UXB8 463 aa7.15□□□□□ -1.26
VRK2-208ENST00000463222 FBF1Q8TES7 1133 aa7.15□□□□□ -1.26
VRK2-208ENST00000463222 ZIC5Q96T25 663 aa7.15□□□□□ -1.26
VRK2-208ENST00000463222 TNFRSF21O75509 655 aa7.14□□□□□ -1.27
VRK2-208ENST00000463222 INPP5BP32019 993 aa7.14□□□□□ -1.27
VRK2-208ENST00000463222 IRS1P35568 1242 aa7.14□□□□□ -1.27
VRK2-208ENST00000463222 ZNF76P36508 570 aa7.14□□□□□ -1.27
VRK2-208ENST00000463222 ARSDP51689 593 aa7.14□□□□□ -1.27
VRK2-208ENST00000463222 PTSQ03393 145 aa7.14□□□□□ -1.27
VRK2-208ENST00000463222 ZNF438Q7Z4V0 828 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms