RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 TRIM6-TRIM34B2RNG4 842 aa7.28□□□□□ -1.24
CLK1-207ENST00000461981 PSEN1P49768 467 aa7.28□□□□□ -1.24
CLK1-207ENST00000461981 SYTL4Q96C24 671 aaPredicted RBP7.28□□□□□ -1.24
CLK1-207ENST00000461981 HHIPL1Q96JK4 782 aa7.28□□□□□ -1.24
CLK1-207ENST00000461981 BRIP1Q9BX63 1249 aa7.28□□□□□ -1.24
CLK1-207ENST00000461981 TRIM34Q9BYJ4 488 aa7.28□□□□□ -1.24
CLK1-207ENST00000461981 SLC52A2Q9HAB3 445 aa7.28□□□□□ -1.24
CLK1-207ENST00000461981 BABAM1Q9NWV8 329 aa7.28□□□□□ -1.24
CLK1-207ENST00000461981 TRAK2O60296 914 aa7.27□□□□□ -1.25
CLK1-207ENST00000461981 VEGFAP15692 232 aaPredicted RBP7.27□□□□□ -1.25
CLK1-207ENST00000461981 IL13P35225 146 aa7.27□□□□□ -1.25
CLK1-207ENST00000461981 IL6STP40189 918 aaPredicted RBP7.27□□□□□ -1.25
CLK1-207ENST00000461981 ATP2B3Q16720 1220 aa7.27□□□□□ -1.25
CLK1-207ENST00000461981 CNKSR1Q969H4 720 aa7.27□□□□□ -1.25
CLK1-207ENST00000461981 CREBZFQ9NS37 354 aa7.27□□□□□ -1.25
CLK1-207ENST00000461981 LAMB2P55268 1798 aa7.27□□□□□ -1.25
CLK1-207ENST00000461981 TRPM7Q96QT4 1865 aa7.27□□□□□ -1.25
CLK1-207ENST00000461981 DPEP1P16444 411 aa7.27□□□□□ -1.25
CLK1-207ENST00000461981 RRP1P56182 461 aaKnown RBP7.27□□□□□ -1.25
CLK1-207ENST00000461981 RRS1Q15050 365 aaKnown RBP7.27□□□□□ -1.25
CLK1-207ENST00000461981 INTS5Q6P9B9 1019 aaKnown RBP7.27□□□□□ -1.25
CLK1-207ENST00000461981 MPRIPQ6WCQ1 1025 aa7.27□□□□□ -1.25
CLK1-207ENST00000461981 GAS2L2Q8NHY3 880 aa7.27□□□□□ -1.25
CLK1-207ENST00000461981 TSC1Q92574 1164 aa7.27□□□□□ -1.25
CLK1-207ENST00000461981 KIF7Q2M1P5 1343 aa7.26□□□□□ -1.25
CLK1-207ENST00000461981 IQCA1LA6NCM1 817 aa7.26□□□□□ -1.25
CLK1-207ENST00000461981 ZNF530Q6P9A1 599 aaPredicted RBP7.26□□□□□ -1.25
CLK1-207ENST00000461981 NECTIN2Q92692 538 aa7.26□□□□□ -1.25
CLK1-207ENST00000461981 LTV1Q96GA3 475 aaPredicted RBP7.26□□□□□ -1.25
CLK1-207ENST00000461981 FCHSD2O94868 740 aa7.26□□□□□ -1.25
CLK1-207ENST00000461981 CRKLP46109 303 aaKnown RBP7.26□□□□□ -1.25
CLK1-207ENST00000461981 MMP14P50281 582 aa7.26□□□□□ -1.25
CLK1-207ENST00000461981 FAM161AQ3B820 660 aa7.26□□□□□ -1.25
CLK1-207ENST00000461981 C8orf34Q49A92 452 aa7.26□□□□□ -1.25
CLK1-207ENST00000461981 C9orf131Q5VYM1 1079 aa7.26□□□□□ -1.25
CLK1-207ENST00000461981 FAM43BQ6ZT52 329 aaPredicted RBP7.26□□□□□ -1.25
CLK1-207ENST00000461981 HEG1Q9ULI3 1381 aa7.26□□□□□ -1.25
CLK1-207ENST00000461981 CYP19A1P11511 503 aaPredicted RBP7.26□□□□□ -1.25
CLK1-207ENST00000461981 BECN1Q14457 450 aa7.26□□□□□ -1.25
CLK1-207ENST00000461981 TTLL6Q8N841 843 aa7.26□□□□□ -1.25
CLK1-207ENST00000461981 SNED1Q8TER0 1413 aa7.25□□□□□ -1.25
CLK1-207ENST00000461981 CNTNAP1P78357 1384 aa7.25□□□□□ -1.25
CLK1-207ENST00000461981 CCDC88AQ3V6T2 1871 aa7.25□□□□□ -1.25
CLK1-207ENST00000461981 RNMTO43148 476 aaKnown RBP7.25□□□□□ -1.25
CLK1-207ENST00000461981 STARD3NLO95772 234 aa7.25□□□□□ -1.25
CLK1-207ENST00000461981 MCM4P33991 863 aa7.25□□□□□ -1.25
CLK1-207ENST00000461981 EIF4G2P78344 907 aaKnown RBP eCLIP7.25□□□□□ -1.25
CLK1-207ENST00000461981 ASAP1Q9ULH1 1129 aa7.25□□□□□ -1.25
CLK1-207ENST00000461981 EMILIN1Q9Y6C2 1016 aa7.25□□□□□ -1.25
CLK1-207ENST00000461981 EIF5P55010 431 aaKnown RBP7.25□□□□□ -1.25
CLK1-207ENST00000461981 REM2Q8IYK8 340 aaPredicted RBP7.25□□□□□ -1.25
CLK1-207ENST00000461981 PNISRQ8TF01 805 aaKnown RBP7.25□□□□□ -1.25
CLK1-207ENST00000461981 CA12O43570 354 aa7.24□□□□□ -1.25
CLK1-207ENST00000461981 ZPR1O75312 459 aa7.24□□□□□ -1.25
CLK1-207ENST00000461981 CC2D1BQ5T0F9 858 aaKnown RBP7.24□□□□□ -1.25
CLK1-207ENST00000461981 LDHDQ86WU2 507 aa7.24□□□□□ -1.25
CLK1-207ENST00000461981 SLC4A9Q96Q91 983 aa7.24□□□□□ -1.25
CLK1-207ENST00000461981 PRKRIP1Q9H875 184 aaPredicted RBP7.24□□□□□ -1.25
CLK1-207ENST00000461981 PASKQ96RG2 1323 aa7.24□□□□□ -1.25
CLK1-207ENST00000461981 LOC102724159A0A0B4J2E5 919 aa7.24□□□□□ -1.25
CLK1-207ENST00000461981 MTHFSP49914 203 aa7.24□□□□□ -1.25
CLK1-207ENST00000461981 PWP2Q15269 919 aaKnown RBP7.24□□□□□ -1.25
CLK1-207ENST00000461981 CHADLQ6NUI6 762 aa7.24□□□□□ -1.25
CLK1-207ENST00000461981 TMC4Q7Z404 712 aa7.24□□□□□ -1.25
CLK1-207ENST00000461981 GAS2L3Q86XJ1 694 aa7.24□□□□□ -1.25
CLK1-207ENST00000461981 TRERF1Q96PN7 1200 aa7.24□□□□□ -1.25
CLK1-207ENST00000461981 FAM177BA6PVY3 158 aa7.24□□□□□ -1.25
CLK1-207ENST00000461981 DDR1Q08345 913 aa7.24□□□□□ -1.25
CLK1-207ENST00000461981 DPY19L2Q6NUT2 758 aa7.24□□□□□ -1.25
CLK1-207ENST00000461981 PANK3Q9H999 370 aa7.24□□□□□ -1.25
CLK1-207ENST00000461981 H0YIN7 160 aa7.23□□□□□ -1.25
CLK1-207ENST00000461981 RGS19P49795 217 aa7.23□□□□□ -1.25
CLK1-207ENST00000461981 ARHGAP27Q6ZUM4 889 aa7.23□□□□□ -1.25
CLK1-207ENST00000461981 CFAP44Q96MT7 982 aa7.23□□□□□ -1.25
CLK1-207ENST00000461981 ZNF652Q9Y2D9 606 aa7.23□□□□□ -1.25
CLK1-207ENST00000461981 PLIN1O60240 522 aa7.23□□□□□ -1.25
CLK1-207ENST00000461981 RTKN2Q8IZC4 609 aa7.23□□□□□ -1.25
CLK1-207ENST00000461981 ZNF622Q969S3 477 aaKnown RBP eCLIP7.23□□□□□ -1.253e-8■■■□□ 17.8
CLK1-207ENST00000461981 PSMD1Q99460 953 aa7.23□□□□□ -1.25
CLK1-207ENST00000461981 PTMAP06454 111 aaKnown RBP7.22□□□□□ -1.25
CLK1-207ENST00000461981 MSL1Q68DK7 614 aa7.22□□□□□ -1.25
CLK1-207ENST00000461981 ERVV-1B6SEH8 477 aa7.22□□□□□ -1.25
CLK1-207ENST00000461981 CTCFP49711 727 aaPredicted RBP7.22□□□□□ -1.25
CLK1-207ENST00000461981 CCDC173Q0VFZ6 552 aa7.22□□□□□ -1.25
CLK1-207ENST00000461981 PNMA8AQ86V59 439 aaPredicted RBP7.22□□□□□ -1.25
CLK1-207ENST00000461981 MASTLQ96GX5 879 aa7.22□□□□□ -1.25
CLK1-207ENST00000461981 BCS1LQ9Y276 419 aa7.22□□□□□ -1.25
CLK1-207ENST00000461981 NPR1P16066 1061 aa7.22□□□□□ -1.25
CLK1-207ENST00000461981 SLC20A2Q08357 652 aa7.22□□□□□ -1.25
CLK1-207ENST00000461981 SASS6Q6UVJ0 657 aa7.22□□□□□ -1.25
CLK1-207ENST00000461981 ANTXR1Q9H6X2 564 aa7.22□□□□□ -1.25
CLK1-207ENST00000461981 PSME4Q14997 1843 aa7.21□□□□□ -1.25
CLK1-207ENST00000461981 RASSF10A6NK89 507 aa7.21□□□□□ -1.25
CLK1-207ENST00000461981 ST5P78524 1137 aa7.21□□□□□ -1.25
CLK1-207ENST00000461981 RALBP1Q15311 655 aa7.21□□□□□ -1.25
CLK1-207ENST00000461981 MORC1Q86VD1 984 aa7.21□□□□□ -1.25
CLK1-207ENST00000461981 USHBP1Q8N6Y0 703 aa7.21□□□□□ -1.25
CLK1-207ENST00000461981 RNF181Q9P0P0 153 aa7.21□□□□□ -1.25
CLK1-207ENST00000461981 SLC34A2O95436 690 aa7.21□□□□□ -1.26
CLK1-207ENST00000461981 SERPINB2P05120 415 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms