RNA–Protein interactions for RNA: ENST00000461871.1

GTF3C5-208, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 3

Gene GTF3C5, Length 623 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-208ENST00000461871 NLRP10Q86W26 655 aa17.45■□□□□ 0.38
GTF3C5-208ENST00000461871 LINC00116Q8NCU8 138 aa17.45■□□□□ 0.38
GTF3C5-208ENST00000461871 LNPKQ9C0E8 428 aa17.45■□□□□ 0.38
GTF3C5-208ENST00000461871 OSBPL3Q9H4L5 887 aa17.45■□□□□ 0.38
GTF3C5-208ENST00000461871 BICC1Q9H694 974 aaKnown RBP17.45■□□□□ 0.38
GTF3C5-208ENST00000461871 COPRSQ9NQ92 184 aa17.45■□□□□ 0.38
GTF3C5-208ENST00000461871 BRWD3Q6RI45 1802 aa17.44■□□□□ 0.38
GTF3C5-208ENST00000461871 MYH14Q7Z406 1995 aaKnown RBP17.44■□□□□ 0.38
GTF3C5-208ENST00000461871 SURF6O75683 361 aaKnown RBP17.44■□□□□ 0.38
GTF3C5-208ENST00000461871 CAMTA2O94983 1202 aa17.44■□□□□ 0.38
GTF3C5-208ENST00000461871 ZNF330Q9Y3S2 320 aaPredicted RBP17.44■□□□□ 0.38
GTF3C5-208ENST00000461871 BMP2KLQ5H9B9 411 aa17.43■□□□□ 0.38
GTF3C5-208ENST00000461871 RTCBQ9Y3I0 505 aaKnown RBP17.43■□□□□ 0.38
GTF3C5-208ENST00000461871 NUP98P52948 1817 aa17.42■□□□□ 0.38
GTF3C5-208ENST00000461871 FOXO4P98177 505 aa17.42■□□□□ 0.38
GTF3C5-208ENST00000461871 HLFQ16534 295 aa17.42■□□□□ 0.38
GTF3C5-208ENST00000461871 PTF1AQ7RTS3 328 aa17.42■□□□□ 0.38
GTF3C5-208ENST00000461871 ARXQ96QS3 562 aa17.42■□□□□ 0.38
GTF3C5-208ENST00000461871 NARFQ9UHQ1 456 aa17.42■□□□□ 0.38
GTF3C5-208ENST00000461871 TBC1D2BQ9UPU7 963 aa17.42■□□□□ 0.38
GTF3C5-208ENST00000461871 AOX1Q06278 1338 aa17.42■□□□□ 0.38
GTF3C5-208ENST00000461871 ANKRD36CQ5JPF3 1778 aa17.41■□□□□ 0.38
GTF3C5-208ENST00000461871 CSF1RP07333 972 aa17.41■□□□□ 0.38
GTF3C5-208ENST00000461871 G3BP1Q13283 466 aaKnown RBP eCLIP17.41■□□□□ 0.38
GTF3C5-208ENST00000461871 FAM182BQ5T319 152 aa17.41■□□□□ 0.38
GTF3C5-208ENST00000461871 PLEKHM2Q8IWE5 1019 aa17.41■□□□□ 0.38
GTF3C5-208ENST00000461871 RHPN1Q8TCX5 695 aa17.41■□□□□ 0.38
GTF3C5-208ENST00000461871 STAP2Q9UGK3 403 aa17.41■□□□□ 0.38
GTF3C5-208ENST00000461871 EXOC6BQ9Y2D4 811 aa17.4■□□□□ 0.38
GTF3C5-208ENST00000461871 TRIM37O94972 964 aa17.39■□□□□ 0.37
GTF3C5-208ENST00000461871 RFX5P48382 616 aaPredicted RBP17.39■□□□□ 0.37
GTF3C5-208ENST00000461871 LMBR1LQ6UX01 489 aa17.39■□□□□ 0.37
GTF3C5-208ENST00000461871 TAF1LQ8IZX4 1826 aa17.39■□□□□ 0.37
GTF3C5-208ENST00000461871 PDE8AO60658 829 aa17.38■□□□□ 0.37
GTF3C5-208ENST00000461871 ZPR1O75312 459 aa17.38■□□□□ 0.37
GTF3C5-208ENST00000461871 CLASRPQ8N2M8 674 aaKnown RBP17.38■□□□□ 0.37
GTF3C5-208ENST00000461871 UTP14AQ9BVJ6 771 aaKnown RBP17.38■□□□□ 0.37
GTF3C5-208ENST00000461871 TRMT112Q9UI30 125 aaKnown RBP17.38■□□□□ 0.37
GTF3C5-208ENST00000461871 CIAO1O76071 339 aa17.37■□□□□ 0.37
GTF3C5-208ENST00000461871 PTPN12Q05209 780 aaKnown RBP17.37■□□□□ 0.37
GTF3C5-208ENST00000461871 EPHA10Q5JZY3 1008 aa17.37■□□□□ 0.37
GTF3C5-208ENST00000461871 TRAPPC3LQ5T215 181 aa17.37■□□□□ 0.37
GTF3C5-208ENST00000461871 IFFO2Q5TF58 517 aa17.37■□□□□ 0.37
GTF3C5-208ENST00000461871 GNPATO15228 680 aa17.36■□□□□ 0.37
GTF3C5-208ENST00000461871 SSFA2P28290 1259 aa17.36■□□□□ 0.37
GTF3C5-208ENST00000461871 OS9Q13438 667 aaPredicted RBP17.36■□□□□ 0.37
GTF3C5-208ENST00000461871 C8orf34Q49A92 452 aa17.36■□□□□ 0.37
GTF3C5-208ENST00000461871 NYXQ9GZU5 481 aa17.36■□□□□ 0.37
GTF3C5-208ENST00000461871 GPR108Q9NPR9 543 aa17.36■□□□□ 0.37
GTF3C5-208ENST00000461871 SH3TC1Q8TE82 1336 aa17.36■□□□□ 0.37
GTF3C5-208ENST00000461871 SALL3Q9BXA9 1300 aa17.36■□□□□ 0.37
GTF3C5-208ENST00000461871 USP42Q9H9J4 1324 aaKnown RBP17.36■□□□□ 0.37
GTF3C5-208ENST00000461871 IRS4O14654 1257 aaPredicted RBP17.35■□□□□ 0.37
GTF3C5-208ENST00000461871 PDE1AP54750 535 aa17.35■□□□□ 0.37
GTF3C5-208ENST00000461871 CCDC57Q2TAC2 916 aa17.35■□□□□ 0.37
GTF3C5-208ENST00000461871 SLC10A5Q5PT55 438 aa17.35■□□□□ 0.37
GTF3C5-208ENST00000461871 SKAP1Q86WV1 359 aa17.35■□□□□ 0.37
GTF3C5-208ENST00000461871 FLAD1Q8NFF5 587 aa17.35■□□□□ 0.37
GTF3C5-208ENST00000461871 FAM89AQ96GI7 184 aa17.35■□□□□ 0.37
GTF3C5-208ENST00000461871 NIP7Q9Y221 180 aaKnown RBP eCLIP17.35■□□□□ 0.37
GTF3C5-208ENST00000461871 RBM19Q9Y4C8 960 aaKnown RBP17.35■□□□□ 0.37
GTF3C5-208ENST00000461871 TTC41PQ6P2S7 1318 aa17.35■□□□□ 0.37
GTF3C5-208ENST00000461871 C4BP0C0L5 1744 aa17.35■□□□□ 0.37
GTF3C5-208ENST00000461871 RFC4P35249 363 aa17.34■□□□□ 0.37
GTF3C5-208ENST00000461871 IL15P40933 162 aaPredicted RBP17.34■□□□□ 0.37
GTF3C5-208ENST00000461871 TXNRD1Q16881 649 aa17.34■□□□□ 0.37
GTF3C5-208ENST00000461871 TTC22Q5TAA0 569 aa17.34■□□□□ 0.37
GTF3C5-208ENST00000461871 BCORQ6W2J9 1755 aa17.34■□□□□ 0.37
GTF3C5-208ENST00000461871 ARHGEF1Q92888 912 aaKnown RBP17.34■□□□□ 0.37
GTF3C5-208ENST00000461871 LRRC4BQ9NT99 713 aa17.34■□□□□ 0.37
GTF3C5-208ENST00000461871 RTL9Q8NET4 1388 aa17.33■□□□□ 0.36
GTF3C5-208ENST00000461871 UBN2Q6ZU65 1347 aa17.33■□□□□ 0.36
GTF3C5-208ENST00000461871 MX1P20591 662 aa17.33■□□□□ 0.36
GTF3C5-208ENST00000461871 GPTP24298 496 aa17.33■□□□□ 0.36
GTF3C5-208ENST00000461871 IFIT5Q13325 482 aaKnown RBP17.33■□□□□ 0.36
GTF3C5-208ENST00000461871 SUSD4Q5VX71 490 aa17.33■□□□□ 0.36
GTF3C5-208ENST00000461871 TICAM2Q86XR7 235 aa17.33■□□□□ 0.36
GTF3C5-208ENST00000461871 TTLL11Q8NHH1 800 aa17.33■□□□□ 0.36
GTF3C5-208ENST00000461871 GPATCH3Q96I76 525 aa17.33■□□□□ 0.36
GTF3C5-208ENST00000461871 RGPD3A6NKT7 1758 aaPredicted RBP17.33■□□□□ 0.36
GTF3C5-208ENST00000461871 RGPD4Q7Z3J3 1758 aa17.33■□□□□ 0.36
GTF3C5-208ENST00000461871 ERC2O15083 957 aa17.32■□□□□ 0.36
GTF3C5-208ENST00000461871 SMARCA5O60264 1052 aaPredicted RBP17.32■□□□□ 0.36
GTF3C5-208ENST00000461871 SASH1O94885 1247 aa17.32■□□□□ 0.36
GTF3C5-208ENST00000461871 APBA3O96018 575 aa17.32■□□□□ 0.36
GTF3C5-208ENST00000461871 CTSWP56202 376 aa17.32■□□□□ 0.36
GTF3C5-208ENST00000461871 C16orf71Q8IYS4 520 aaPredicted RBP17.32■□□□□ 0.36
GTF3C5-208ENST00000461871 SETDB2Q96T68 719 aa17.32■□□□□ 0.36
GTF3C5-208ENST00000461871 EYA2O00167 538 aa17.31■□□□□ 0.36
GTF3C5-208ENST00000461871 NTSR2O95665 410 aa17.31■□□□□ 0.36
GTF3C5-208ENST00000461871 PROM2Q8N271 834 aa17.31■□□□□ 0.36
GTF3C5-208ENST00000461871 PA2G4Q9UQ80 394 aaKnown RBP17.31■□□□□ 0.36
GTF3C5-208ENST00000461871 EP400Q96L91 3159 aa17.3■□□□□ 0.36
GTF3C5-208ENST00000461871 APBB1O00213 710 aa17.3■□□□□ 0.36
GTF3C5-208ENST00000461871 GLRX3O76003 335 aaKnown RBP17.3■□□□□ 0.36
GTF3C5-208ENST00000461871 IFIT2P09913 472 aaKnown RBP17.3■□□□□ 0.36
GTF3C5-208ENST00000461871 TPTE2Q6XPS3 522 aa17.3■□□□□ 0.36
GTF3C5-208ENST00000461871 JARID2Q92833 1246 aaPredicted RBP17.3■□□□□ 0.36
GTF3C5-208ENST00000461871 BCL2L12Q9HB09 334 aa17.3■□□□□ 0.36
GTF3C5-208ENST00000461871 AKAP2Q9Y2D5 859 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms