RNA–Protein interactions for RNA: ENST00000461343.1

LSG1-205, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 428 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-205ENST00000461343 CCNL1Q9UK58 526 aaPredicted RBP9.18□□□□□ -0.94
LSG1-205ENST00000461343 TTC41PQ6P2S7 1318 aa9.17□□□□□ -0.94
LSG1-205ENST00000461343 ZPR1O75312 459 aa9.17□□□□□ -0.94
LSG1-205ENST00000461343 CCDC57Q2TAC2 916 aa9.17□□□□□ -0.94
LSG1-205ENST00000461343 TTLL7Q6ZT98 887 aa9.17□□□□□ -0.94
LSG1-205ENST00000461343 BICC1Q9H694 974 aaKnown RBP9.17□□□□□ -0.94
LSG1-205ENST00000461343 COPRSQ9NQ92 184 aa9.17□□□□□ -0.94
LSG1-205ENST00000461343 ZBTB1Q9Y2K1 713 aa9.17□□□□□ -0.94
LSG1-205ENST00000461343 RTCBQ9Y3I0 505 aaKnown RBP9.17□□□□□ -0.94
LSG1-205ENST00000461343 BTAF1O14981 1849 aa9.17□□□□□ -0.94
LSG1-205ENST00000461343 RPS6KA4O75676 772 aa9.16□□□□□ -0.94
LSG1-205ENST00000461343 CIAO1O76071 339 aa9.16□□□□□ -0.94
LSG1-205ENST00000461343 MX1P20591 662 aa9.16□□□□□ -0.94
LSG1-205ENST00000461343 INTS5Q6P9B9 1019 aaKnown RBP9.16□□□□□ -0.94
LSG1-205ENST00000461343 FLAD1Q8NFF5 587 aa9.16□□□□□ -0.94
LSG1-205ENST00000461343 RHPN1Q8TCX5 695 aa9.16□□□□□ -0.94
LSG1-205ENST00000461343 COL5A3P25940 1745 aaPredicted RBP9.16□□□□□ -0.94
LSG1-205ENST00000461343 ANKRD36CQ5JPF3 1778 aa9.15□□□□□ -0.94
LSG1-205ENST00000461343 SH3TC1Q8TE82 1336 aa9.15□□□□□ -0.94
LSG1-205ENST00000461343 PNMA6EA0A0J9YXQ4 647 aa9.15□□□□□ -0.94
LSG1-205ENST00000461343 ATP5J2-PTCD1G3V325 749 aa9.15□□□□□ -0.94
LSG1-205ENST00000461343 HIP1O00291 1037 aa9.15□□□□□ -0.94
LSG1-205ENST00000461343 CDC45O75419 566 aa9.15□□□□□ -0.94
LSG1-205ENST00000461343 GLRX3O76003 335 aaKnown RBP9.15□□□□□ -0.94
LSG1-205ENST00000461343 IFIT2P09913 472 aaKnown RBP9.15□□□□□ -0.94
LSG1-205ENST00000461343 IL15P40933 162 aaPredicted RBP9.15□□□□□ -0.94
LSG1-205ENST00000461343 IFIT5Q13325 482 aaKnown RBP9.15□□□□□ -0.94
LSG1-205ENST00000461343 LRRFIP1Q32MZ4 808 aaKnown RBP9.15□□□□□ -0.94
LSG1-205ENST00000461343 TAF7LQ5H9L4 462 aa9.15□□□□□ -0.94
LSG1-205ENST00000461343 NLRP10Q86W26 655 aa9.15□□□□□ -0.94
LSG1-205ENST00000461343 SUCLG2Q96I99 432 aa9.15□□□□□ -0.94
LSG1-205ENST00000461343 UTP14AQ9BVJ6 771 aaKnown RBP9.15□□□□□ -0.94
LSG1-205ENST00000461343 GPR108Q9NPR9 543 aa9.15□□□□□ -0.94
LSG1-205ENST00000461343 STAP2Q9UGK3 403 aa9.15□□□□□ -0.94
LSG1-205ENST00000461343 TRMT112Q9UI30 125 aaKnown RBP9.15□□□□□ -0.94
LSG1-205ENST00000461343 EXOC6BQ9Y2D4 811 aa9.15□□□□□ -0.94
LSG1-205ENST00000461343 AKAP2Q9Y2D5 859 aa9.15□□□□□ -0.94
LSG1-205ENST00000461343 PLSCR1O15162 318 aa9.14□□□□□ -0.95
LSG1-205ENST00000461343 EPB41L2O43491 1005 aaKnown RBP9.14□□□□□ -0.95
LSG1-205ENST00000461343 KCNQ2O43526 872 aa9.14□□□□□ -0.95
LSG1-205ENST00000461343 PDE8AO60658 829 aa9.14□□□□□ -0.95
LSG1-205ENST00000461343 REC8O95072 547 aa9.14□□□□□ -0.95
LSG1-205ENST00000461343 TTC22Q5TAA0 569 aa9.14□□□□□ -0.95
LSG1-205ENST00000461343 PLEKHM2Q8IWE5 1019 aa9.14□□□□□ -0.95
LSG1-205ENST00000461343 ZNF34Q8IZ26 560 aa9.14□□□□□ -0.95
LSG1-205ENST00000461343 SLC4A9Q96Q91 983 aa9.14□□□□□ -0.95
LSG1-205ENST00000461343 DAXXQ9UER7 740 aaPredicted RBP9.14□□□□□ -0.95
LSG1-205ENST00000461343 NARFQ9UHQ1 456 aa9.14□□□□□ -0.95
LSG1-205ENST00000461343 RBM19Q9Y4C8 960 aaKnown RBP9.14□□□□□ -0.95
LSG1-205ENST00000461343 SBF2Q86WG5 1849 aa9.14□□□□□ -0.95
LSG1-205ENST00000461343 LY75O60449 1722 aa9.14□□□□□ -0.95
LSG1-205ENST00000461343 USP42Q9H9J4 1324 aaKnown RBP9.13□□□□□ -0.95
LSG1-205ENST00000461343 ANKRD18BA2A2Z9 1011 aa9.13□□□□□ -0.95
LSG1-205ENST00000461343 SSFA2P28290 1259 aa9.13□□□□□ -0.95
LSG1-205ENST00000461343 RFC4P35249 363 aa9.13□□□□□ -0.95
LSG1-205ENST00000461343 PIP4K2AP48426 406 aaPredicted RBP9.13□□□□□ -0.95
LSG1-205ENST00000461343 ITPK1Q13572 414 aa9.13□□□□□ -0.95
LSG1-205ENST00000461343 CCDC152Q4G0S7 254 aa9.13□□□□□ -0.95
LSG1-205ENST00000461343 TRAPPC3LQ5T215 181 aa9.13□□□□□ -0.95
LSG1-205ENST00000461343 LMBR1LQ6UX01 489 aa9.13□□□□□ -0.95
LSG1-205ENST00000461343 CNTROBQ8N137 903 aa9.13□□□□□ -0.95
LSG1-205ENST00000461343 SETDB2Q96T68 719 aa9.13□□□□□ -0.95
LSG1-205ENST00000461343 CHMP3Q9Y3E7 222 aa9.13□□□□□ -0.95
LSG1-205ENST00000461343 RTL9Q8NET4 1388 aa9.12□□□□□ -0.95
LSG1-205ENST00000461343 IRS4O14654 1257 aaPredicted RBP9.12□□□□□ -0.95
LSG1-205ENST00000461343 GNPATO15228 680 aa9.12□□□□□ -0.95
LSG1-205ENST00000461343 CAMTA2O94983 1202 aa9.12□□□□□ -0.95
LSG1-205ENST00000461343 GTF2E1P29083 439 aaPredicted RBP9.12□□□□□ -0.95
LSG1-205ENST00000461343 PDE1AP54750 535 aa9.12□□□□□ -0.95
LSG1-205ENST00000461343 CASP7P55210 303 aa9.12□□□□□ -0.95
LSG1-205ENST00000461343 CTSWP56202 376 aa9.12□□□□□ -0.95
LSG1-205ENST00000461343 C1QBPQ07021 282 aaKnown RBP9.12□□□□□ -0.95
LSG1-205ENST00000461343 C8orf34Q49A92 452 aa9.12□□□□□ -0.95
LSG1-205ENST00000461343 TPTE2Q6XPS3 522 aa9.12□□□□□ -0.95
LSG1-205ENST00000461343 RUFY2Q8WXA3 655 aa9.12□□□□□ -0.95
LSG1-205ENST00000461343 CDC5LQ99459 802 aaKnown RBP9.12□□□□□ -0.95
LSG1-205ENST00000461343 ECHDC1Q9NTX5 307 aa9.12□□□□□ -0.95
LSG1-205ENST00000461343 CEP126Q9P2H0 1117 aa9.12□□□□□ -0.95
LSG1-205ENST00000461343 TBC1D2BQ9UPU7 963 aa9.12□□□□□ -0.95
LSG1-205ENST00000461343 NIP7Q9Y221 180 aaKnown RBP eCLIP9.12□□□□□ -0.95
LSG1-205ENST00000461343 RGPD3A6NKT7 1758 aaPredicted RBP9.12□□□□□ -0.95
LSG1-205ENST00000461343 RGPD4Q7Z3J3 1758 aa9.12□□□□□ -0.95
LSG1-205ENST00000461343 NUP98P52948 1817 aa9.11□□□□□ -0.95
LSG1-205ENST00000461343 EYA2O00167 538 aa9.11□□□□□ -0.95
LSG1-205ENST00000461343 APBB1O00213 710 aa9.11□□□□□ -0.95
LSG1-205ENST00000461343 CSF1RP07333 972 aa9.11□□□□□ -0.95
LSG1-205ENST00000461343 FOXO4P98177 505 aa9.11□□□□□ -0.95
LSG1-205ENST00000461343 SF3B2Q13435 895 aaKnown RBP9.11□□□□□ -0.95
LSG1-205ENST00000461343 BECN1Q14457 450 aa9.11□□□□□ -0.95
LSG1-205ENST00000461343 LINC00116Q8NCU8 138 aa9.11□□□□□ -0.95
LSG1-205ENST00000461343 ABCC12Q96J65 1359 aa9.11□□□□□ -0.95
LSG1-205ENST00000461343 SCN7AQ01118 1682 aa9.1□□□□□ -0.95
LSG1-205ENST00000461343 MROH5Q6ZUA9 1318 aa9.1□□□□□ -0.95
LSG1-205ENST00000461343 BCORQ6W2J9 1755 aa9.1□□□□□ -0.95
LSG1-205ENST00000461343 NPHP1O15259 732 aa9.1□□□□□ -0.95
LSG1-205ENST00000461343 MCCP23508 829 aa9.1□□□□□ -0.95
LSG1-205ENST00000461343 IGHMBP2P38935 993 aaKnown RBP9.1□□□□□ -0.95
LSG1-205ENST00000461343 PTPN12Q05209 780 aaKnown RBP9.1□□□□□ -0.95
LSG1-205ENST00000461343 AACSQ86V21 672 aa9.1□□□□□ -0.95
LSG1-205ENST00000461343 KAZALD1Q96I82 304 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms