RNA–Protein interactions for RNA: ENST00000461004.1

RTN4-212, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 422 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-212ENST00000461004 RCCD1A6NED2 376 aa9.66□□□□□ -0.86
RTN4-212ENST00000461004 NBPF26B4DH59 902 aa9.66□□□□□ -0.86
RTN4-212ENST00000461004 SLC39A6Q13433 755 aa9.66□□□□□ -0.86
RTN4-212ENST00000461004 NFE2L2Q16236 605 aa9.66□□□□□ -0.86
RTN4-212ENST00000461004 RBM46Q8TBY0 533 aaKnown RBP9.66□□□□□ -0.86
RTN4-212ENST00000461004 SLC4A9Q96Q91 983 aa9.66□□□□□ -0.86
RTN4-212ENST00000461004 POTEMA6NI47 508 aa9.65□□□□□ -0.86
RTN4-212ENST00000461004 BHMG1C9JSJ3 638 aaPredicted RBP9.65□□□□□ -0.86
RTN4-212ENST00000461004 KCNQ3O43525 872 aa9.65□□□□□ -0.86
RTN4-212ENST00000461004 TMPOP42166 694 aaKnown RBP9.65□□□□□ -0.86
RTN4-212ENST00000461004 ADGRD1Q6QNK2 874 aa9.65□□□□□ -0.86
RTN4-212ENST00000461004 RUNDC1Q96C34 613 aa9.65□□□□□ -0.86
RTN4-212ENST00000461004 SLC52A2Q9HAB3 445 aa9.65□□□□□ -0.86
RTN4-212ENST00000461004 PALLDQ8WX93 1383 aa9.64□□□□□ -0.87
RTN4-212ENST00000461004 TK2O00142 265 aa9.64□□□□□ -0.87
RTN4-212ENST00000461004 RIPK4P57078 832 aa9.64□□□□□ -0.87
RTN4-212ENST00000461004 ITPK1Q13572 414 aa9.64□□□□□ -0.87
RTN4-212ENST00000461004 TTLL12Q14166 644 aaPredicted RBP9.64□□□□□ -0.87
RTN4-212ENST00000461004 GIGYF2Q6Y7W6 1299 aaKnown RBP9.64□□□□□ -0.87
RTN4-212ENST00000461004 SMIM5Q71RC9 77 aa9.64□□□□□ -0.87
RTN4-212ENST00000461004 MIS18AQ9NYP9 233 aa9.64□□□□□ -0.87
RTN4-212ENST00000461004 CCNL1Q9UK58 526 aaPredicted RBP9.64□□□□□ -0.87
RTN4-212ENST00000461004 SCN11AQ9UI33 1791 aa9.63□□□□□ -0.87
RTN4-212ENST00000461004 MAPK8IP3Q9UPT6 1336 aa9.63□□□□□ -0.87
RTN4-212ENST00000461004 APAF1O14727 1248 aa9.63□□□□□ -0.87
RTN4-212ENST00000461004 HRO43593 1189 aa9.63□□□□□ -0.87
RTN4-212ENST00000461004 PTCD1O75127 700 aaKnown RBP9.63□□□□□ -0.87
RTN4-212ENST00000461004 MS4A1P11836 297 aa9.63□□□□□ -0.87
RTN4-212ENST00000461004 R3HDM1Q15032 1099 aaKnown RBP9.63□□□□□ -0.87
RTN4-212ENST00000461004 ZNF827Q17R98 1081 aa9.63□□□□□ -0.87
RTN4-212ENST00000461004 ANKRD13DQ6ZTN6 518 aa9.63□□□□□ -0.87
RTN4-212ENST00000461004 FAM9BQ8IZU0 186 aa9.63□□□□□ -0.87
RTN4-212ENST00000461004 PDGFDQ9GZP0 370 aaPredicted RBP9.63□□□□□ -0.87
RTN4-212ENST00000461004 CEMIPQ8WUJ3 1361 aa9.63□□□□□ -0.87
RTN4-212ENST00000461004 RREB1Q92766 1687 aa9.62□□□□□ -0.87
RTN4-212ENST00000461004 ADAMTS7Q9UKP4 1686 aa9.62□□□□□ -0.87
RTN4-212ENST00000461004 LOC102724428A0A0B4J2F2 783 aa9.62□□□□□ -0.87
RTN4-212ENST00000461004 NEFMP07197 916 aa9.62□□□□□ -0.87
RTN4-212ENST00000461004 SIK1P57059 783 aa9.62□□□□□ -0.87
RTN4-212ENST00000461004 RTF1Q92541 710 aaKnown RBP9.62□□□□□ -0.87
RTN4-212ENST00000461004 SMARCC1Q92922 1105 aaPredicted RBP9.62□□□□□ -0.87
RTN4-212ENST00000461004 PNNQ9H307 717 aaKnown RBP9.62□□□□□ -0.87
RTN4-212ENST00000461004 GPCPD1Q9NPB8 672 aa9.62□□□□□ -0.87
RTN4-212ENST00000461004 NUP188Q5SRE5 1749 aa9.62□□□□□ -0.87
RTN4-212ENST00000461004 MRC1P22897 1456 aa9.61□□□□□ -0.87
RTN4-212ENST00000461004 DLG5Q8TDM6 1919 aa9.61□□□□□ -0.87
RTN4-212ENST00000461004 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.61□□□□□ -0.87
RTN4-212ENST00000461004 HTATSF1O43719 755 aaKnown RBP9.61□□□□□ -0.87
RTN4-212ENST00000461004 CLCN1P35523 988 aa9.61□□□□□ -0.87
RTN4-212ENST00000461004 ATP6V1AP38606 617 aa9.61□□□□□ -0.87
RTN4-212ENST00000461004 TEFQ10587 303 aa9.61□□□□□ -0.87
RTN4-212ENST00000461004 SLC27A3Q5K4L6 730 aa9.61□□□□□ -0.87
RTN4-212ENST00000461004 AMIGO3Q86WK7 504 aa9.61□□□□□ -0.87
RTN4-212ENST00000461004 LINC00116Q8NCU8 138 aa9.61□□□□□ -0.87
RTN4-212ENST00000461004 FAM117AQ9C073 453 aa9.61□□□□□ -0.87
RTN4-212ENST00000461004 TMEM134Q9H6X4 195 aa9.61□□□□□ -0.87
RTN4-212ENST00000461004 SALL2Q9Y467 1007 aaPredicted RBP9.61□□□□□ -0.87
RTN4-212ENST00000461004 LY75O60449 1722 aa9.6□□□□□ -0.87
RTN4-212ENST00000461004 BTBD11A6QL63 1104 aa9.6□□□□□ -0.87
RTN4-212ENST00000461004 DNAJB2P25686 324 aa9.6□□□□□ -0.87
RTN4-212ENST00000461004 SLC15A2Q16348 729 aa9.6□□□□□ -0.87
RTN4-212ENST00000461004 ZNF496Q96IT1 587 aaPredicted RBP9.6□□□□□ -0.87
RTN4-212ENST00000461004 VIRMAQ69YN4 1812 aaKnown RBP9.6□□□□□ -0.87
RTN4-212ENST00000461004 PRAMEF22A3QJZ6 481 aa9.59□□□□□ -0.87
RTN4-212ENST00000461004 TAF7Q15545 349 aaPredicted RBP9.59□□□□□ -0.87
RTN4-212ENST00000461004 NBPF14Q5TI25 921 aa9.59□□□□□ -0.87
RTN4-212ENST00000461004 ZNF790Q6PG37 636 aa9.59□□□□□ -0.87
RTN4-212ENST00000461004 CDAN1Q8IWY9 1227 aa9.59□□□□□ -0.87
RTN4-212ENST00000461004 DNAJC10Q8IXB1 793 aa9.59□□□□□ -0.87
RTN4-212ENST00000461004 FAM217BQ9NTX9 383 aaPredicted RBP9.59□□□□□ -0.87
RTN4-212ENST00000461004 STK32BQ9NY57 414 aa9.59□□□□□ -0.87
RTN4-212ENST00000461004 RGPD3A6NKT7 1758 aaPredicted RBP9.59□□□□□ -0.87
RTN4-212ENST00000461004 RGPD4Q7Z3J3 1758 aa9.59□□□□□ -0.87
RTN4-212ENST00000461004 KCPQ6ZWJ8 1503 aa9.58□□□□□ -0.88
RTN4-212ENST00000461004 PAPPAQ13219 1627 aa9.58□□□□□ -0.88
RTN4-212ENST00000461004 CCER2I3L3R5 266 aa9.58□□□□□ -0.88
RTN4-212ENST00000461004 SIPA1L3O60292 1781 aaPredicted RBP9.58□□□□□ -0.88
RTN4-212ENST00000461004 SSTR3P32745 418 aaPredicted RBP9.57□□□□□ -0.88
RTN4-212ENST00000461004 IL27Q8NEV9 243 aa9.57□□□□□ -0.88
RTN4-212ENST00000461004 DAXXQ9UER7 740 aaPredicted RBP9.57□□□□□ -0.88
RTN4-212ENST00000461004 LAS1LQ9Y4W2 734 aaKnown RBP9.57□□□□□ -0.88
RTN4-212ENST00000461004 PNPLA7Q6ZV29 1317 aa9.56□□□□□ -0.88
RTN4-212ENST00000461004 CYP19A1P11511 503 aaPredicted RBP9.56□□□□□ -0.88
RTN4-212ENST00000461004 KRT24Q2M2I5 525 aa9.56□□□□□ -0.88
RTN4-212ENST00000461004 SWT1Q5T5J6 900 aaKnown RBP9.56□□□□□ -0.88
RTN4-212ENST00000461004 INTS5Q6P9B9 1019 aaKnown RBP9.56□□□□□ -0.88
RTN4-212ENST00000461004 COL23A1Q86Y22 540 aaPredicted RBP9.56□□□□□ -0.88
RTN4-212ENST00000461004 TTC5Q8N0Z6 440 aa9.56□□□□□ -0.88
RTN4-212ENST00000461004 TFCP2L1Q9NZI6 479 aa9.56□□□□□ -0.88
RTN4-212ENST00000461004 USP16Q9Y5T5 823 aa9.56□□□□□ -0.88
RTN4-212ENST00000461004 TAF1LQ8IZX4 1826 aa9.55□□□□□ -0.88
RTN4-212ENST00000461004 ZBTB7AO95365 584 aa9.55□□□□□ -0.88
RTN4-212ENST00000461004 CRKLP46109 303 aaKnown RBP9.55□□□□□ -0.88
RTN4-212ENST00000461004 PIP4K2AP48426 406 aaPredicted RBP9.55□□□□□ -0.88
RTN4-212ENST00000461004 EIF4A1P60842 406 aaKnown RBP9.55□□□□□ -0.88
RTN4-212ENST00000461004 LAPTM4BQ86VI4 370 aa9.55□□□□□ -0.88
RTN4-212ENST00000461004 WWC1Q8IX03 1113 aa9.55□□□□□ -0.88
RTN4-212ENST00000461004 NBPF3Q9H094 633 aa9.55□□□□□ -0.88
RTN4-212ENST00000461004 TSPYL4Q9UJ04 414 aa9.55□□□□□ -0.88
RTN4-212ENST00000461004 C5P01031 1676 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms