RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 STAP2Q9UGK3 403 aa18.38■□□□□ 0.53
LMNB1-203ENST00000460265 SLIT1O75093 1534 aa18.38■□□□□ 0.53
LMNB1-203ENST00000460265 FER1L4A9Z1Z3 1794 aa18.38■□□□□ 0.53
LMNB1-203ENST00000460265 CDK11BP21127 795 aaKnown RBP18.38■□□□□ 0.53
LMNB1-203ENST00000460265 PTH1RQ03431 593 aa18.38■□□□□ 0.53
LMNB1-203ENST00000460265 NMIQ13287 307 aaPredicted RBP18.38■□□□□ 0.53
LMNB1-203ENST00000460265 GCKRQ14397 625 aa18.38■□□□□ 0.53
LMNB1-203ENST00000460265 EVI5LQ96CN4 794 aa18.38■□□□□ 0.53
LMNB1-203ENST00000460265 ADCY9O60503 1353 aa18.38■□□□□ 0.53
LMNB1-203ENST00000460265 CYP27B1O15528 508 aa18.37■□□□□ 0.53
LMNB1-203ENST00000460265 FKBP4Q02790 459 aaKnown RBP eCLIP18.37■□□□□ 0.53
LMNB1-203ENST00000460265 RNF20Q5VTR2 975 aa18.37■□□□□ 0.53
LMNB1-203ENST00000460265 AK9Q5TCS8 1911 aa18.37■□□□□ 0.53
LMNB1-203ENST00000460265 TFCP2Q12800 502 aa18.37■□□□□ 0.53
LMNB1-203ENST00000460265 KLHL40Q2TBA0 621 aa18.37■□□□□ 0.53
LMNB1-203ENST00000460265 PI4K2BQ8TCG2 481 aa18.37■□□□□ 0.53
LMNB1-203ENST00000460265 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.37■□□□□ 0.53
LMNB1-203ENST00000460265 SNX14Q9Y5W7 946 aa18.37■□□□□ 0.53
LMNB1-203ENST00000460265 NEURL1BA8MQ27 555 aa18.36■□□□□ 0.53
LMNB1-203ENST00000460265 GPTP24298 496 aa18.36■□□□□ 0.53
LMNB1-203ENST00000460265 POLA2Q14181 598 aa18.36■□□□□ 0.53
LMNB1-203ENST00000460265 HS1BP3Q53T59 392 aa18.36■□□□□ 0.53
LMNB1-203ENST00000460265 SNRKQ9NRH2 765 aa18.36■□□□□ 0.53
LMNB1-203ENST00000460265 EPHA10Q5JZY3 1008 aa18.36■□□□□ 0.53
LMNB1-203ENST00000460265 LIMCH1Q9UPQ0 1083 aa18.36■□□□□ 0.53
LMNB1-203ENST00000460265 ZKSCAN5Q9Y2L8 839 aa18.36■□□□□ 0.53
LMNB1-203ENST00000460265 RBM8AQ9Y5S9 174 aaKnown RBP18.36■□□□□ 0.53
LMNB1-203ENST00000460265 AKAP12Q02952 1782 aa18.36■□□□□ 0.53
LMNB1-203ENST00000460265 IGKV5-2P06315 115 aa18.36■□□□□ 0.53
LMNB1-203ENST00000460265 TIMM10P62072 90 aa18.36■□□□□ 0.53
LMNB1-203ENST00000460265 BLOC1S2Q6QNY1 142 aa18.35■□□□□ 0.53
LMNB1-203ENST00000460265 METTL22Q9BUU2 404 aaPredicted RBP18.35■□□□□ 0.53
LMNB1-203ENST00000460265 VGLL3A8MV65 326 aa18.35■□□□□ 0.53
LMNB1-203ENST00000460265 WASHC4Q2M389 1173 aa18.35■□□□□ 0.53
LMNB1-203ENST00000460265 KIF20AO95235 890 aa18.35■□□□□ 0.53
LMNB1-203ENST00000460265 ANAPC15P60006 121 aa18.35■□□□□ 0.53
LMNB1-203ENST00000460265 TTLL7Q6ZT98 887 aa18.35■□□□□ 0.53
LMNB1-203ENST00000460265 TSC1Q92574 1164 aa18.35■□□□□ 0.53
LMNB1-203ENST00000460265 LRRC2Q9BYS8 371 aa18.35■□□□□ 0.53
LMNB1-203ENST00000460265 GTPBP4Q9BZE4 634 aaKnown RBP18.35■□□□□ 0.53
LMNB1-203ENST00000460265 CEMIPQ8WUJ3 1361 aa18.34■□□□□ 0.53
LMNB1-203ENST00000460265 SASH1O94885 1247 aa18.34■□□□□ 0.53
LMNB1-203ENST00000460265 SYAP1Q96A49 352 aaPredicted RBP18.34■□□□□ 0.53
LMNB1-203ENST00000460265 ZNF594Q96JF6 807 aaPredicted RBP18.34■□□□□ 0.53
LMNB1-203ENST00000460265 WDR33Q9C0J8 1336 aaKnown RBP18.34■□□□□ 0.53
LMNB1-203ENST00000460265 HSPA4P34932 840 aa18.34■□□□□ 0.53
LMNB1-203ENST00000460265 ZSCAN23Q3MJ62 389 aa18.34■□□□□ 0.53
LMNB1-203ENST00000460265 GOLIM4O00461 696 aa18.33■□□□□ 0.53
LMNB1-203ENST00000460265 ADCK5Q3MIX3 580 aa18.33■□□□□ 0.52
LMNB1-203ENST00000460265 LARP1BQ659C4 914 aaKnown RBP18.33■□□□□ 0.52
LMNB1-203ENST00000460265 CCDC129Q6ZRS4 1044 aa18.33■□□□□ 0.52
LMNB1-203ENST00000460265 DBNDD2Q9BQY9 259 aa18.33■□□□□ 0.52
LMNB1-203ENST00000460265 TTC41PQ6P2S7 1318 aa18.33■□□□□ 0.52
LMNB1-203ENST00000460265 DDX11Q96FC9 970 aa18.33■□□□□ 0.52
LMNB1-203ENST00000460265 TMOD3Q9NYL9 352 aa18.33■□□□□ 0.52
LMNB1-203ENST00000460265 IGSF3O75054 1194 aa18.32■□□□□ 0.52
LMNB1-203ENST00000460265 LMBRD1Q9NUN5 540 aa18.32■□□□□ 0.52
LMNB1-203ENST00000460265 PRIM1P49642 420 aaKnown RBP18.32■□□□□ 0.52
LMNB1-203ENST00000460265 CEBPZQ03701 1054 aaKnown RBP18.32■□□□□ 0.52
LMNB1-203ENST00000460265 KDM4AO75164 1064 aa18.32■□□□□ 0.52
LMNB1-203ENST00000460265 LETM1O95202 739 aaPredicted RBP18.32■□□□□ 0.52
LMNB1-203ENST00000460265 CCDC57Q2TAC2 916 aa18.32■□□□□ 0.52
LMNB1-203ENST00000460265 PLCD3Q8N3E9 789 aa18.32■□□□□ 0.52
LMNB1-203ENST00000460265 RAD50Q92878 1312 aa18.31■□□□□ 0.52
LMNB1-203ENST00000460265 HIP1O00291 1037 aa18.31■□□□□ 0.52
LMNB1-203ENST00000460265 PSMA5P28066 241 aa18.31■□□□□ 0.52
LMNB1-203ENST00000460265 GJB2P29033 226 aa18.31■□□□□ 0.52
LMNB1-203ENST00000460265 H3BQV1 296 aa18.31■□□□□ 0.52
LMNB1-203ENST00000460265 IFFO2Q5TF58 517 aa18.31■□□□□ 0.52
LMNB1-203ENST00000460265 CCDC39Q9UFE4 941 aa18.31■□□□□ 0.52
LMNB1-203ENST00000460265 KNDC1Q76NI1 1749 aa18.31■□□□□ 0.52
LMNB1-203ENST00000460265 FAM184AQ8NB25 1140 aa18.31■□□□□ 0.52
LMNB1-203ENST00000460265 RBSNQ9H1K0 784 aa18.31■□□□□ 0.52
LMNB1-203ENST00000460265 CNPY2Q9Y2B0 182 aa18.31■□□□□ 0.52
LMNB1-203ENST00000460265 SLAIN2Q9P270 581 aa18.3■□□□□ 0.52
LMNB1-203ENST00000460265 SPDYE4A6NLX3 237 aa18.3■□□□□ 0.52
LMNB1-203ENST00000460265 SEC62Q99442 399 aaKnown RBP18.3■□□□□ 0.52
LMNB1-203ENST00000460265 CWC25Q9NXE8 425 aaPredicted RBP18.3■□□□□ 0.52
LMNB1-203ENST00000460265 ATP6V1DQ9Y5K8 247 aa18.3■□□□□ 0.52
LMNB1-203ENST00000460265 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.3■□□□□ 0.52
LMNB1-203ENST00000460265 PIK3C2AO00443 1686 aa18.3■□□□□ 0.52
LMNB1-203ENST00000460265 A0A0D9SFI3 127 aa18.29■□□□□ 0.52
LMNB1-203ENST00000460265 STX6O43752 255 aa18.29■□□□□ 0.52
LMNB1-203ENST00000460265 DDIT3P35638 169 aa18.29■□□□□ 0.52
LMNB1-203ENST00000460265 CEP126Q9P2H0 1117 aa18.29■□□□□ 0.52
LMNB1-203ENST00000460265 ZDHHC9Q9Y397 364 aa18.29■□□□□ 0.52
LMNB1-203ENST00000460265 PXDNQ92626 1479 aa18.29■□□□□ 0.52
LMNB1-203ENST00000460265 ADAMTS2O95450 1211 aa18.29■□□□□ 0.52
LMNB1-203ENST00000460265 CHGBP05060 677 aa18.29■□□□□ 0.52
LMNB1-203ENST00000460265 APPP05067 770 aa18.29■□□□□ 0.52
LMNB1-203ENST00000460265 CREB3L3Q68CJ9 461 aa18.29■□□□□ 0.52
LMNB1-203ENST00000460265 LSG1Q9H089 658 aaKnown RBP18.29■□□□□ 0.52
LMNB1-203ENST00000460265 CGNQ9P2M7 1197 aaKnown RBP18.29■□□□□ 0.52
LMNB1-203ENST00000460265 NSFL1CQ9UNZ2 370 aaKnown RBP18.29■□□□□ 0.52
LMNB1-203ENST00000460265 MBD3O95983 291 aa18.29■□□□□ 0.52
LMNB1-203ENST00000460265 IL2RBP14784 551 aa18.29■□□□□ 0.52
LMNB1-203ENST00000460265 USP48Q86UV5 1035 aa18.29■□□□□ 0.52
LMNB1-203ENST00000460265 C1orf167Q5SNV9 1468 aa18.28■□□□□ 0.52
LMNB1-203ENST00000460265 FAM173BQ6P4H8 233 aa18.28■□□□□ 0.52
LMNB1-203ENST00000460265 FAM89AQ96GI7 184 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms