RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 PARP10Q53GL7 1025 aa20.92■□□□□ 0.94
LINC00963-208ENST00000454968 USPL1Q5W0Q7 1092 aa20.92■□□□□ 0.94
LINC00963-208ENST00000454968 SIRT2Q8IXJ6 389 aa20.92■□□□□ 0.94
LINC00963-208ENST00000454968 RPAP2Q8IXW5 612 aaPredicted RBP20.92■□□□□ 0.94
LINC00963-208ENST00000454968 C9orf78Q9NZ63 289 aaPredicted RBP20.92■□□□□ 0.94
LINC00963-208ENST00000454968 HDAC5Q9UQL6 1122 aa20.92■□□□□ 0.94
LINC00963-208ENST00000454968 MYH3P11055 1940 aa20.91■□□□□ 0.94
LINC00963-208ENST00000454968 KDM2BQ8NHM5 1336 aa20.91■□□□□ 0.94
LINC00963-208ENST00000454968 ZPR1O75312 459 aa20.91■□□□□ 0.94
LINC00963-208ENST00000454968 PCCAP05165 728 aaPredicted RBP20.91■□□□□ 0.94
LINC00963-208ENST00000454968 MTX1Q13505 466 aa20.91■□□□□ 0.94
LINC00963-208ENST00000454968 SLC15A2Q16348 729 aa20.91■□□□□ 0.94
LINC00963-208ENST00000454968 CEP85Q6P2H3 762 aa20.91■□□□□ 0.94
LINC00963-208ENST00000454968 ANKRD44Q8N8A2 993 aa20.91■□□□□ 0.94
LINC00963-208ENST00000454968 SRP68Q9UHB9 627 aaKnown RBP20.91■□□□□ 0.94
LINC00963-208ENST00000454968 PNPLA7Q6ZV29 1317 aa20.9■□□□□ 0.94
LINC00963-208ENST00000454968 ZBTB38Q8NAP3 1195 aaPredicted RBP20.9■□□□□ 0.94
LINC00963-208ENST00000454968 ARXQ96QS3 562 aa20.9■□□□□ 0.94
LINC00963-208ENST00000454968 DDX60Q8IY21 1712 aaKnown RBP20.9■□□□□ 0.94
LINC00963-208ENST00000454968 CDHR2Q9BYE9 1310 aa20.9■□□□□ 0.94
LINC00963-208ENST00000454968 PHF14O94880 888 aa20.89■□□□□ 0.94
LINC00963-208ENST00000454968 GYS1P13807 737 aa20.89■□□□□ 0.94
LINC00963-208ENST00000454968 CCDC136Q96JN2 1154 aa20.89■□□□□ 0.94
LINC00963-208ENST00000454968 C1orf115Q9H7X2 142 aa20.89■□□□□ 0.94
LINC00963-208ENST00000454968 TFCP2L1Q9NZI6 479 aa20.89■□□□□ 0.94
LINC00963-208ENST00000454968 LRRFIP2Q9Y608 721 aaKnown RBP20.89■□□□□ 0.94
LINC00963-208ENST00000454968 GPTP24298 496 aa20.88■□□□□ 0.93
LINC00963-208ENST00000454968 RABL6Q3YEC7 729 aaPredicted RBP20.88■□□□□ 0.93
LINC00963-208ENST00000454968 B4GALNT3Q6L9W6 998 aa20.88■□□□□ 0.93
LINC00963-208ENST00000454968 COL23A1Q86Y22 540 aaPredicted RBP20.88■□□□□ 0.93
LINC00963-208ENST00000454968 PLA2G12BQ9BX93 195 aa20.88■□□□□ 0.93
LINC00963-208ENST00000454968 TBC1D9BQ66K14 1250 aa20.87■□□□□ 0.93
LINC00963-208ENST00000454968 UBE3BQ7Z3V4 1068 aa20.87■□□□□ 0.93
LINC00963-208ENST00000454968 SUCLG2Q96I99 432 aa20.87■□□□□ 0.93
LINC00963-208ENST00000454968 NIP7Q9Y221 180 aaKnown RBP eCLIP20.87■□□□□ 0.93
LINC00963-208ENST00000454968 NRXN2Q9P2S2 1712 aa20.87■□□□□ 0.93
LINC00963-208ENST00000454968 NTSR2O95665 410 aa20.87■□□□□ 0.93
LINC00963-208ENST00000454968 IGHDP01880 384 aa20.87■□□□□ 0.93
LINC00963-208ENST00000454968 ATP8B2P98198 1209 aa20.87■□□□□ 0.93
LINC00963-208ENST00000454968 SUSD4Q5VX71 490 aa20.87■□□□□ 0.93
LINC00963-208ENST00000454968 STK32BQ9NY57 414 aa20.87■□□□□ 0.93
LINC00963-208ENST00000454968 CASZ1Q86V15 1759 aa20.86■□□□□ 0.93
LINC00963-208ENST00000454968 TM4SF1P30408 202 aa20.85■□□□□ 0.93
LINC00963-208ENST00000454968 POLA2Q14181 598 aa20.85■□□□□ 0.93
LINC00963-208ENST00000454968 SSH3Q8TE77 659 aa20.85■□□□□ 0.93
LINC00963-208ENST00000454968 FOXO4P98177 505 aa20.84■□□□□ 0.93
LINC00963-208ENST00000454968 EPHA10Q5JZY3 1008 aa20.84■□□□□ 0.93
LINC00963-208ENST00000454968 PPP1R42Q7Z4L9 355 aa20.84■□□□□ 0.93
LINC00963-208ENST00000454968 UTP14AQ9BVJ6 771 aaKnown RBP20.84■□□□□ 0.93
LINC00963-208ENST00000454968 RWDD1Q9H446 243 aaPredicted RBP20.84■□□□□ 0.93
LINC00963-208ENST00000454968 BICC1Q9H694 974 aaKnown RBP20.84■□□□□ 0.93
LINC00963-208ENST00000454968 CARMIL3Q8ND23 1372 aa20.83■□□□□ 0.93
LINC00963-208ENST00000454968 RIC1Q4ADV7 1423 aa20.83■□□□□ 0.93
LINC00963-208ENST00000454968 NFIXQ14938 502 aa20.83■□□□□ 0.93
LINC00963-208ENST00000454968 CENPQQ7L2Z9 268 aaPredicted RBP20.83■□□□□ 0.93
LINC00963-208ENST00000454968 SMC5Q8IY18 1101 aa20.83■□□□□ 0.93
LINC00963-208ENST00000454968 FAM89AQ96GI7 184 aa20.83■□□□□ 0.93
LINC00963-208ENST00000454968 SH3TC1Q8TE82 1336 aa20.83■□□□□ 0.92
LINC00963-208ENST00000454968 PNMA6EA0A0J9YXQ4 647 aa20.82■□□□□ 0.92
LINC00963-208ENST00000454968 SETDB2Q96T68 719 aa20.82■□□□□ 0.92
LINC00963-208ENST00000454968 TRMT112Q9UI30 125 aaKnown RBP20.82■□□□□ 0.92
LINC00963-208ENST00000454968 CSF1RP07333 972 aa20.81■□□□□ 0.92
LINC00963-208ENST00000454968 SLC10A5Q5PT55 438 aa20.81■□□□□ 0.92
LINC00963-208ENST00000454968 ILDR2Q71H61 639 aa20.81■□□□□ 0.92
LINC00963-208ENST00000454968 NLGN1Q8N2Q7 840 aa20.81■□□□□ 0.92
LINC00963-208ENST00000454968 SYNE4Q8N205 404 aa20.8■□□□□ 0.92
LINC00963-208ENST00000454968 JARID2Q92833 1246 aaPredicted RBP20.8■□□□□ 0.92
LINC00963-208ENST00000454968 NYXQ9GZU5 481 aa20.8■□□□□ 0.92
LINC00963-208ENST00000454968 DCTPP1Q9H773 170 aa20.8■□□□□ 0.92
LINC00963-208ENST00000454968 HMMRO75330 724 aa20.79■□□□□ 0.92
LINC00963-208ENST00000454968 IRS4O14654 1257 aaPredicted RBP20.78■□□□□ 0.92
LINC00963-208ENST00000454968 PDE8AO60658 829 aa20.78■□□□□ 0.92
LINC00963-208ENST00000454968 HSP90B1P14625 803 aaKnown RBP20.78■□□□□ 0.92
LINC00963-208ENST00000454968 RFX5P48382 616 aaPredicted RBP20.78■□□□□ 0.92
LINC00963-208ENST00000454968 DDR1Q08345 913 aa20.78■□□□□ 0.92
LINC00963-208ENST00000454968 GCC1Q96CN9 775 aa20.78■□□□□ 0.92
LINC00963-208ENST00000454968 NOP58Q9Y2X3 529 aaKnown RBP20.78■□□□□ 0.92
LINC00963-208ENST00000454968 RTL9Q8NET4 1388 aa20.77■□□□□ 0.92
LINC00963-208ENST00000454968 POLRMTO00411 1230 aaKnown RBP20.77■□□□□ 0.91
LINC00963-208ENST00000454968 SRGAP3O43295 1099 aa20.77■□□□□ 0.91
LINC00963-208ENST00000454968 TPTE2Q6XPS3 522 aa20.77■□□□□ 0.91
LINC00963-208ENST00000454968 SLC16A10Q8TF71 515 aa20.77■□□□□ 0.91
LINC00963-208ENST00000454968 ABCC12Q96J65 1359 aa20.77■□□□□ 0.91
LINC00963-208ENST00000454968 TNRC6CQ9HCJ0 1690 aaKnown RBP20.76■□□□□ 0.91
LINC00963-208ENST00000454968 RTL5Q5HYW3 569 aaPredicted RBP20.76■□□□□ 0.91
LINC00963-208ENST00000454968 LMBR1LQ6UX01 489 aa20.76■□□□□ 0.91
LINC00963-208ENST00000454968 BICDL1Q6ZP65 573 aa20.76■□□□□ 0.91
LINC00963-208ENST00000454968 TTLL11Q8NHH1 800 aa20.76■□□□□ 0.91
LINC00963-208ENST00000454968 LRP5O75197 1615 aa20.75■□□□□ 0.91
LINC00963-208ENST00000454968 CTSWP56202 376 aa20.75■□□□□ 0.91
LINC00963-208ENST00000454968 ERFEQ4G0M1 354 aa20.75■□□□□ 0.91
LINC00963-208ENST00000454968 NBPF5PQ86XG9 351 aaPredicted RBP20.75■□□□□ 0.91
LINC00963-208ENST00000454968 COPRSQ9NQ92 184 aa20.75■□□□□ 0.91
LINC00963-208ENST00000454968 ANKRD31Q8N7Z5 1873 aa20.75■□□□□ 0.91
LINC00963-208ENST00000454968 SF3B3Q15393 1217 aaKnown RBP20.74■□□□□ 0.91
LINC00963-208ENST00000454968 NUTM1Q86Y26 1132 aa20.74■□□□□ 0.91
LINC00963-208ENST00000454968 SERPINB2P05120 415 aa20.73■□□□□ 0.91
LINC00963-208ENST00000454968 PRR5LQ6MZQ0 368 aa20.73■□□□□ 0.91
LINC00963-208ENST00000454968 PTPN12Q05209 780 aaKnown RBP20.72■□□□□ 0.91
LINC00963-208ENST00000454968 PDGFDQ9GZP0 370 aaPredicted RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms