RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 UTYO14607 1347 aa19.64■□□□□ 0.73
SNX17-204ENST00000453453 UBR3Q6ZT12 1888 aa19.63■□□□□ 0.73
SNX17-204ENST00000453453 RGL2O15211 777 aa19.63■□□□□ 0.73
SNX17-204ENST00000453453 NBPF7P0C2Y1 421 aaPredicted RBP19.63■□□□□ 0.73
SNX17-204ENST00000453453 TRIM28Q13263 835 aaKnown RBP19.63■□□□□ 0.73
SNX17-204ENST00000453453 CAMTA2O94983 1202 aa19.62■□□□□ 0.73
SNX17-204ENST00000453453 IGHDP01880 384 aa19.62■□□□□ 0.73
SNX17-204ENST00000453453 ADRA2BP18089 450 aa19.62■□□□□ 0.73
SNX17-204ENST00000453453 HLFQ16534 295 aa19.62■□□□□ 0.73
SNX17-204ENST00000453453 CEP85Q6P2H3 762 aa19.62■□□□□ 0.73
SNX17-204ENST00000453453 ZPR1O75312 459 aa19.62■□□□□ 0.73
SNX17-204ENST00000453453 TRAPPC3LQ5T215 181 aa19.62■□□□□ 0.73
SNX17-204ENST00000453453 C4AP0C0L4 1744 aa19.61■□□□□ 0.73
SNX17-204ENST00000453453 CLEC4GQ6UXB4 293 aa19.61■□□□□ 0.73
SNX17-204ENST00000453453 PROM2Q8N271 834 aa19.61■□□□□ 0.73
SNX17-204ENST00000453453 EP400Q96L91 3159 aa19.61■□□□□ 0.73
SNX17-204ENST00000453453 RTN4Q9NQC3 1192 aaKnown RBP19.61■□□□□ 0.73
SNX17-204ENST00000453453 NARFQ9UHQ1 456 aa19.61■□□□□ 0.73
SNX17-204ENST00000453453 BAG6P46379 1132 aa19.6■□□□□ 0.73
SNX17-204ENST00000453453 UBE3BQ7Z3V4 1068 aa19.6■□□□□ 0.73
SNX17-204ENST00000453453 GPTP24298 496 aa19.59■□□□□ 0.73
SNX17-204ENST00000453453 RFC4P35249 363 aa19.59■□□□□ 0.73
SNX17-204ENST00000453453 PHF14O94880 888 aa19.58■□□□□ 0.73
SNX17-204ENST00000453453 SSFA2P28290 1259 aa19.58■□□□□ 0.73
SNX17-204ENST00000453453 ATP8B2P98198 1209 aa19.58■□□□□ 0.73
SNX17-204ENST00000453453 PARP10Q53GL7 1025 aa19.58■□□□□ 0.73
SNX17-204ENST00000453453 L1TD1Q5T7N2 865 aaKnown RBP19.58■□□□□ 0.73
SNX17-204ENST00000453453 ZNF34Q8IZ26 560 aa19.58■□□□□ 0.73
SNX17-204ENST00000453453 H7C1W4 665 aa19.58■□□□□ 0.72
SNX17-204ENST00000453453 NLRP10Q86W26 655 aa19.58■□□□□ 0.72
SNX17-204ENST00000453453 SKAP1Q86WV1 359 aa19.58■□□□□ 0.72
SNX17-204ENST00000453453 SIRT2Q8IXJ6 389 aa19.58■□□□□ 0.72
SNX17-204ENST00000453453 GCC1Q96CN9 775 aa19.58■□□□□ 0.72
SNX17-204ENST00000453453 PCCAP05165 728 aaPredicted RBP19.57■□□□□ 0.72
SNX17-204ENST00000453453 ARHGEF1Q92888 912 aaKnown RBP19.57■□□□□ 0.72
SNX17-204ENST00000453453 SUCLG2Q96I99 432 aa19.57■□□□□ 0.72
SNX17-204ENST00000453453 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.56■□□□□ 0.72
SNX17-204ENST00000453453 FRAT2O75474 233 aaPredicted RBP19.56■□□□□ 0.72
SNX17-204ENST00000453453 CCDC125Q86Z20 511 aa19.56■□□□□ 0.72
SNX17-204ENST00000453453 ZBTB38Q8NAP3 1195 aaPredicted RBP19.56■□□□□ 0.72
SNX17-204ENST00000453453 NIP7Q9Y221 180 aaKnown RBP eCLIP19.56■□□□□ 0.72
SNX17-204ENST00000453453 USP42Q9H9J4 1324 aaKnown RBP19.55■□□□□ 0.72
SNX17-204ENST00000453453 SLC4A3P48751 1232 aa19.55■□□□□ 0.72
SNX17-204ENST00000453453 EN1Q05925 392 aaPredicted RBP19.55■□□□□ 0.72
SNX17-204ENST00000453453 USPL1Q5W0Q7 1092 aa19.55■□□□□ 0.72
SNX17-204ENST00000453453 TFCP2L1Q9NZI6 479 aa19.55■□□□□ 0.72
SNX17-204ENST00000453453 TRMT112Q9UI30 125 aaKnown RBP19.55■□□□□ 0.72
SNX17-204ENST00000453453 MTX1Q13505 466 aa19.54■□□□□ 0.72
SNX17-204ENST00000453453 PPP1R42Q7Z4L9 355 aa19.54■□□□□ 0.72
SNX17-204ENST00000453453 SMC5Q8IY18 1101 aa19.54■□□□□ 0.72
SNX17-204ENST00000453453 FLAD1Q8NFF5 587 aa19.54■□□□□ 0.72
SNX17-204ENST00000453453 CAMKK2Q96RR4 588 aa19.54■□□□□ 0.72
SNX17-204ENST00000453453 BICC1Q9H694 974 aaKnown RBP19.54■□□□□ 0.72
SNX17-204ENST00000453453 SRGAP3O43295 1099 aa19.54■□□□□ 0.72
SNX17-204ENST00000453453 CASP7P55210 303 aa19.54■□□□□ 0.72
SNX17-204ENST00000453453 EZH2Q15910 746 aaKnown RBP19.54■□□□□ 0.72
SNX17-204ENST00000453453 SMIM5Q71RC9 77 aa19.54■□□□□ 0.72
SNX17-204ENST00000453453 JARID2Q92833 1246 aaPredicted RBP19.54■□□□□ 0.72
SNX17-204ENST00000453453 SRP68Q9UHB9 627 aaKnown RBP19.54■□□□□ 0.72
SNX17-204ENST00000453453 TUBGCP6Q96RT7 1819 aa19.54■□□□□ 0.72
SNX17-204ENST00000453453 UBN2Q6ZU65 1347 aa19.53■□□□□ 0.72
SNX17-204ENST00000453453 CDHR2Q9BYE9 1310 aa19.53■□□□□ 0.72
SNX17-204ENST00000453453 HSP90B1P14625 803 aaKnown RBP19.53■□□□□ 0.72
SNX17-204ENST00000453453 RGS3P49796 1198 aa19.53■□□□□ 0.72
SNX17-204ENST00000453453 SSH3Q8TE77 659 aa19.53■□□□□ 0.72
SNX17-204ENST00000453453 AKT1S1Q96B36 256 aa19.53■□□□□ 0.72
SNX17-204ENST00000453453 UTP14AQ9BVJ6 771 aaKnown RBP19.53■□□□□ 0.72
SNX17-204ENST00000453453 DCTPP1Q9H773 170 aa19.53■□□□□ 0.72
SNX17-204ENST00000453453 MYH3P11055 1940 aa19.52■□□□□ 0.72
SNX17-204ENST00000453453 PNMA6EA0A0J9YXQ4 647 aa19.52■□□□□ 0.72
SNX17-204ENST00000453453 AMIGO3Q86WK7 504 aa19.52■□□□□ 0.72
SNX17-204ENST00000453453 COL24A1Q17RW2 1714 aa19.51■□□□□ 0.71
SNX17-204ENST00000453453 ZNF827Q17R98 1081 aa19.51■□□□□ 0.71
SNX17-204ENST00000453453 UBE2Q2Q8WVN8 375 aa19.51■□□□□ 0.71
SNX17-204ENST00000453453 FAM89AQ96GI7 184 aa19.51■□□□□ 0.71
SNX17-204ENST00000453453 KAZALD1Q96I82 304 aa19.51■□□□□ 0.71
SNX17-204ENST00000453453 SETDB2Q96T68 719 aa19.51■□□□□ 0.71
SNX17-204ENST00000453453 LAMB2P55268 1798 aa19.51■□□□□ 0.71
SNX17-204ENST00000453453 POLA2Q14181 598 aa19.51■□□□□ 0.71
SNX17-204ENST00000453453 BCL2L12Q9HB09 334 aa19.51■□□□□ 0.71
SNX17-204ENST00000453453 STK32BQ9NY57 414 aa19.51■□□□□ 0.71
SNX17-204ENST00000453453 SH3TC1Q8TE82 1336 aa19.5■□□□□ 0.71
SNX17-204ENST00000453453 RABL6Q3YEC7 729 aaPredicted RBP19.5■□□□□ 0.71
SNX17-204ENST00000453453 SUSD4Q5VX71 490 aa19.5■□□□□ 0.71
SNX17-204ENST00000453453 PLA2G12BQ9BX93 195 aa19.5■□□□□ 0.71
SNX17-204ENST00000453453 NYXQ9GZU5 481 aa19.5■□□□□ 0.71
SNX17-204ENST00000453453 QSER1Q2KHR3 1735 aa19.5■□□□□ 0.71
SNX17-204ENST00000453453 FAM177BA6PVY3 158 aa19.49■□□□□ 0.71
SNX17-204ENST00000453453 HSP90AB4PQ58FF6 505 aa19.49■□□□□ 0.71
SNX17-204ENST00000453453 TBC1D9BQ66K14 1250 aa19.49■□□□□ 0.71
SNX17-204ENST00000453453 BICDL1Q6ZP65 573 aa19.49■□□□□ 0.71
SNX17-204ENST00000453453 UPF2Q9HAU5 1272 aaKnown RBP19.49■□□□□ 0.71
SNX17-204ENST00000453453 PDZRN3Q9UPQ7 1066 aa19.49■□□□□ 0.71
SNX17-204ENST00000453453 CHMP3Q9Y3E7 222 aa19.49■□□□□ 0.71
SNX17-204ENST00000453453 IRS4O14654 1257 aaPredicted RBP19.48■□□□□ 0.71
SNX17-204ENST00000453453 FOXO4P98177 505 aa19.48■□□□□ 0.71
SNX17-204ENST00000453453 EPHA10Q5JZY3 1008 aa19.48■□□□□ 0.71
SNX17-204ENST00000453453 NTSR2O95665 410 aa19.47■□□□□ 0.71
SNX17-204ENST00000453453 ANKRD45Q5TZF3 282 aa19.47■□□□□ 0.71
SNX17-204ENST00000453453 LMBR1LQ6UX01 489 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 181.3 ms