RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 ITSN1Q15811 1721 aa13.3□□□□□ -0.28
DDR1-239ENST00000452441 KIF24Q5T7B8 1368 aa13.29□□□□□ -0.28
DDR1-239ENST00000452441 GLRX3O76003 335 aaKnown RBP13.29□□□□□ -0.28
DDR1-239ENST00000452441 MBD3O95983 291 aa13.29□□□□□ -0.28
DDR1-239ENST00000452441 SLFNL1Q499Z3 407 aa13.29□□□□□ -0.28
DDR1-239ENST00000452441 CCDC82Q8N4S0 544 aa13.29□□□□□ -0.28
DDR1-239ENST00000452441 HYPKQ9NX55 129 aa13.29□□□□□ -0.28
DDR1-239ENST00000452441 OVOS2A0A0J9YW53 1432 aa13.29□□□□□ -0.28
DDR1-239ENST00000452441 OVOS2Q6IE36 1432 aa13.29□□□□□ -0.28
DDR1-239ENST00000452441 STX6O43752 255 aa13.29□□□□□ -0.28
DDR1-239ENST00000452441 KSR2Q6VAB6 950 aa13.29□□□□□ -0.28
DDR1-239ENST00000452441 BICC1Q9H694 974 aaKnown RBP13.29□□□□□ -0.28
DDR1-239ENST00000452441 ECHDC1Q9NTX5 307 aa13.29□□□□□ -0.28
DDR1-239ENST00000452441 USP16Q9Y5T5 823 aa13.29□□□□□ -0.28
DDR1-239ENST00000452441 IBTKQ9P2D0 1353 aaPredicted RBP13.29□□□□□ -0.28
DDR1-239ENST00000452441 GRM8O00222 908 aa13.29□□□□□ -0.28
DDR1-239ENST00000452441 CHGBP05060 677 aa13.29□□□□□ -0.28
DDR1-239ENST00000452441 ISM2Q6H9L7 571 aa13.29□□□□□ -0.28
DDR1-239ENST00000452441 ATP6V1DQ9Y5K8 247 aa13.29□□□□□ -0.28
DDR1-239ENST00000452441 PTH1RQ03431 593 aa13.28□□□□□ -0.28
DDR1-239ENST00000452441 TRIM5Q9C035 493 aa13.28□□□□□ -0.28
DDR1-239ENST00000452441 CRB1P82279 1406 aa13.28□□□□□ -0.28
DDR1-239ENST00000452441 UQCRHLA0A096LP55 91 aa13.28□□□□□ -0.28
DDR1-239ENST00000452441 HTATSF1O43719 755 aaKnown RBP13.28□□□□□ -0.28
DDR1-239ENST00000452441 UQCRHP07919 91 aa13.28□□□□□ -0.28
DDR1-239ENST00000452441 ADCK5Q3MIX3 580 aa13.28□□□□□ -0.28
DDR1-239ENST00000452441 RNF20Q5VTR2 975 aa13.28□□□□□ -0.28
DDR1-239ENST00000452441 PRDM10Q9NQV6 1147 aa13.28□□□□□ -0.28
DDR1-239ENST00000452441 LIMCH1Q9UPQ0 1083 aa13.28□□□□□ -0.28
DDR1-239ENST00000452441 BECN2A8MW95 431 aa13.28□□□□□ -0.28
DDR1-239ENST00000452441 ZNF790Q6PG37 636 aa13.28□□□□□ -0.28
DDR1-239ENST00000452441 ERCC4Q92889 916 aaPredicted RBP13.28□□□□□ -0.28
DDR1-239ENST00000452441 RBM8AQ9Y5S9 174 aaKnown RBP13.28□□□□□ -0.28
DDR1-239ENST00000452441 GOLIM4O00461 696 aa13.27□□□□□ -0.28
DDR1-239ENST00000452441 OFD1O75665 1012 aa13.27□□□□□ -0.28
DDR1-239ENST00000452441 MCM2P49736 904 aa13.27□□□□□ -0.28
DDR1-239ENST00000452441 LRSAM1Q6UWE0 723 aa13.27□□□□□ -0.28
DDR1-239ENST00000452441 ERC1Q8IUD2 1116 aa13.27□□□□□ -0.28
DDR1-239ENST00000452441 NRKQ7Z2Y5 1582 aa13.27□□□□□ -0.28
DDR1-239ENST00000452441 ARHGEF10O15013 1369 aa13.27□□□□□ -0.28
DDR1-239ENST00000452441 A1BGP04217 495 aa13.27□□□□□ -0.29
DDR1-239ENST00000452441 TIMM10P62072 90 aa13.27□□□□□ -0.29
DDR1-239ENST00000452441 CHAF1AQ13111 956 aaPredicted RBP13.27□□□□□ -0.29
DDR1-239ENST00000452441 NMIQ13287 307 aaPredicted RBP13.27□□□□□ -0.29
DDR1-239ENST00000452441 CNNM1Q9NRU3 951 aa13.27□□□□□ -0.29
DDR1-239ENST00000452441 TLR7Q9NYK1 1049 aaKnown RBP13.27□□□□□ -0.29
DDR1-239ENST00000452441 SYT1P21579 422 aa13.27□□□□□ -0.29
DDR1-239ENST00000452441 RRP12Q5JTH9 1297 aaKnown RBP13.27□□□□□ -0.29
DDR1-239ENST00000452441 LMBR1LQ6UX01 489 aa13.27□□□□□ -0.29
DDR1-239ENST00000452441 SEC62Q99442 399 aaKnown RBP13.27□□□□□ -0.29
DDR1-239ENST00000452441 IQSEC3Q9UPP2 1182 aaPredicted RBP13.27□□□□□ -0.29
DDR1-239ENST00000452441 A0A087WWV3 80 aa13.26□□□□□ -0.29
DDR1-239ENST00000452441 SNRPA1P09661 255 aaKnown RBP13.26□□□□□ -0.29
DDR1-239ENST00000452441 TMOD3Q9NYL9 352 aa13.26□□□□□ -0.29
DDR1-239ENST00000452441 CCDC57Q2TAC2 916 aa13.25□□□□□ -0.29
DDR1-239ENST00000452441 FILIP1Q7Z7B0 1213 aa13.25□□□□□ -0.29
DDR1-239ENST00000452441 CCDC144CPQ8IYA2 1237 aa13.25□□□□□ -0.29
DDR1-239ENST00000452441 SUCLG2Q96I99 432 aa13.25□□□□□ -0.29
DDR1-239ENST00000452441 TBC1D2BQ9UPU7 963 aa13.25□□□□□ -0.29
DDR1-239ENST00000452441 SNX14Q9Y5W7 946 aa13.25□□□□□ -0.29
DDR1-239ENST00000452441 CEP170BQ9Y4F5 1589 aaPredicted RBP13.25□□□□□ -0.29
DDR1-239ENST00000452441 NPHP3Q7Z494 1330 aa13.25□□□□□ -0.29
DDR1-239ENST00000452441 GOLGA6L19H0YKK7 550 aa13.25□□□□□ -0.29
DDR1-239ENST00000452441 ADCY5O95622 1261 aa13.25□□□□□ -0.29
DDR1-239ENST00000452441 ZNF594Q96JF6 807 aaPredicted RBP13.25□□□□□ -0.29
DDR1-239ENST00000452441 KIAA0232Q92628 1395 aa13.25□□□□□ -0.29
DDR1-239ENST00000452441 UBR1Q8IWV7 1749 aa13.25□□□□□ -0.29
DDR1-239ENST00000452441 CPLX1O14810 134 aa13.25□□□□□ -0.29
DDR1-239ENST00000452441 GIGYF1O75420 1035 aaPredicted RBP13.25□□□□□ -0.29
DDR1-239ENST00000452441 SLC4A8Q2Y0W8 1093 aa13.25□□□□□ -0.29
DDR1-239ENST00000452441 SPATA32Q96LK8 384 aa13.25□□□□□ -0.29
DDR1-239ENST00000452441 LARGE1O95461 756 aa13.24□□□□□ -0.29
DDR1-239ENST00000452441 SASS6Q6UVJ0 657 aa13.24□□□□□ -0.29
DDR1-239ENST00000452441 ARHGEF25Q86VW2 580 aa13.24□□□□□ -0.29
DDR1-239ENST00000452441 HELBQ8NG08 1087 aaPredicted RBP13.24□□□□□ -0.29
DDR1-239ENST00000452441 ZCRB1Q8TBF4 217 aaKnown RBP13.24□□□□□ -0.29
DDR1-239ENST00000452441 NOL7Q9UMY1 257 aaKnown RBP13.24□□□□□ -0.29
DDR1-239ENST00000452441 KIF6Q6ZMV9 814 aa13.24□□□□□ -0.29
DDR1-239ENST00000452441 SDF4Q9BRK5 362 aa13.24□□□□□ -0.29
DDR1-239ENST00000452441 TNMDQ9H2S6 317 aa13.24□□□□□ -0.29
DDR1-239ENST00000452441 LINS1Q8NG48 757 aa13.24□□□□□ -0.29
DDR1-239ENST00000452441 BRF1Q92994 677 aa13.24□□□□□ -0.29
DDR1-239ENST00000452441 IDH1O75874 414 aaKnown RBP13.23□□□□□ -0.29
DDR1-239ENST00000452441 VPS37DQ86XT2 251 aa13.23□□□□□ -0.29
DDR1-239ENST00000452441 CCDC39Q9UFE4 941 aa13.23□□□□□ -0.29
DDR1-239ENST00000452441 ME1P48163 572 aa13.23□□□□□ -0.29
DDR1-239ENST00000452441 CCDC24Q8N4L8 307 aa13.23□□□□□ -0.29
DDR1-239ENST00000452441 ZMYND15Q9H091 742 aa13.23□□□□□ -0.29
DDR1-239ENST00000452441 CEP126Q9P2H0 1117 aa13.23□□□□□ -0.29
DDR1-239ENST00000452441 BRD1O95696 1058 aa13.23□□□□□ -0.29
DDR1-239ENST00000452441 PIBF1Q8WXW3 757 aa13.23□□□□□ -0.29
DDR1-239ENST00000452441 ZKSCAN5Q9Y2L8 839 aa13.23□□□□□ -0.29
DDR1-239ENST00000452441 BIN1O00499 593 aa13.22□□□□□ -0.29
DDR1-239ENST00000452441 RAD21O60216 631 aa13.22□□□□□ -0.29
DDR1-239ENST00000452441 POLR3DP05423 398 aaPredicted RBP13.22□□□□□ -0.29
DDR1-239ENST00000452441 KCNQ4P56696 695 aa13.22□□□□□ -0.29
DDR1-239ENST00000452441 KRT85P78386 507 aa13.22□□□□□ -0.29
DDR1-239ENST00000452441 HSP90AA4PQ58FG1 418 aa13.22□□□□□ -0.29
DDR1-239ENST00000452441 EAF2Q96CJ1 260 aaPredicted RBP13.22□□□□□ -0.29
DDR1-239ENST00000452441 OSBPL3Q9H4L5 887 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms