RNA–Protein interactions for RNA: ENST00000449457.1

LINC02561-201, Transcript of long intergenic non-protein coding RNA 2561, humanhuman

TSL 3 BASIC

Gene LINC02561, Length 692 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02561-201ENST00000449457 CAMTA2O94983 1202 aa13.5□□□□□ -0.25
LINC02561-201ENST00000449457 SLC34A2O95436 690 aa13.5□□□□□ -0.25
LINC02561-201ENST00000449457 CTCFP49711 727 aaPredicted RBP13.5□□□□□ -0.25
LINC02561-201ENST00000449457 BRIP1Q9BX63 1249 aa13.5□□□□□ -0.25
LINC02561-201ENST00000449457 HEG1Q9ULI3 1381 aa13.49□□□□□ -0.25
LINC02561-201ENST00000449457 PDE6BP35913 854 aa13.49□□□□□ -0.25
LINC02561-201ENST00000449457 LDHDQ86WU2 507 aa13.49□□□□□ -0.25
LINC02561-201ENST00000449457 TTC5Q8N0Z6 440 aa13.49□□□□□ -0.25
LINC02561-201ENST00000449457 ABHD8Q96I13 439 aa13.49□□□□□ -0.25
LINC02561-201ENST00000449457 TMEM106CQ9BVX2 250 aa13.49□□□□□ -0.25
LINC02561-201ENST00000449457 SCN4AP35499 1836 aa13.48□□□□□ -0.25
LINC02561-201ENST00000449457 LTBP3Q9NS15 1303 aa13.48□□□□□ -0.25
LINC02561-201ENST00000449457 TMEM88BA6NKF7 163 aa13.48□□□□□ -0.25
LINC02561-201ENST00000449457 ITGBL1O95965 494 aaPredicted RBP13.48□□□□□ -0.25
LINC02561-201ENST00000449457 SRGNP10124 158 aa13.48□□□□□ -0.25
LINC02561-201ENST00000449457 PRDM10Q9NQV6 1147 aa13.48□□□□□ -0.25
LINC02561-201ENST00000449457 WBP1LQ9NX94 342 aa13.48□□□□□ -0.25
LINC02561-201ENST00000449457 STARD3NLO95772 234 aa13.46□□□□□ -0.25
LINC02561-201ENST00000449457 EPHX2P34913 555 aa13.46□□□□□ -0.25
LINC02561-201ENST00000449457 ST5P78524 1137 aa13.46□□□□□ -0.25
LINC02561-201ENST00000449457 CC2D1BQ5T0F9 858 aaKnown RBP13.46□□□□□ -0.25
LINC02561-201ENST00000449457 DZIP3Q86Y13 1208 aaKnown RBP13.46□□□□□ -0.25
LINC02561-201ENST00000449457 IL17REQ8NFR9 667 aa13.46□□□□□ -0.25
LINC02561-201ENST00000449457 SETDB2Q96T68 719 aa13.46□□□□□ -0.25
LINC02561-201ENST00000449457 ABT1Q9ULW3 272 aaKnown RBP13.46□□□□□ -0.25
LINC02561-201ENST00000449457 COL3A1P02461 1466 aaPredicted RBP13.46□□□□□ -0.25
LINC02561-201ENST00000449457 CCDC85CA6NKD9 419 aa13.45□□□□□ -0.26
LINC02561-201ENST00000449457 TRAF5O00463 557 aa13.45□□□□□ -0.26
LINC02561-201ENST00000449457 CCDC93Q567U6 631 aa13.45□□□□□ -0.26
LINC02561-201ENST00000449457 STYK1Q6J9G0 422 aa13.45□□□□□ -0.26
LINC02561-201ENST00000449457 ZNF790Q6PG37 636 aa13.45□□□□□ -0.26
LINC02561-201ENST00000449457 FBXO22Q8NEZ5 403 aa13.45□□□□□ -0.26
LINC02561-201ENST00000449457 C7orf43Q8WVR3 580 aa13.45□□□□□ -0.26
LINC02561-201ENST00000449457 CNKSR1Q969H4 720 aa13.45□□□□□ -0.26
LINC02561-201ENST00000449457 MASTLQ96GX5 879 aa13.45□□□□□ -0.26
LINC02561-201ENST00000449457 L3MBTL3Q96JM7 780 aaPredicted RBP13.45□□□□□ -0.26
LINC02561-201ENST00000449457 ABCC12Q96J65 1359 aa13.45□□□□□ -0.26
LINC02561-201ENST00000449457 WDR33Q9C0J8 1336 aaKnown RBP13.44□□□□□ -0.26
LINC02561-201ENST00000449457 THSD7BQ9C0I4 1608 aa13.44□□□□□ -0.26
LINC02561-201ENST00000449457 A0A087WZG4 1122 aa13.44□□□□□ -0.26
LINC02561-201ENST00000449457 IQCA1LA6NCM1 817 aa13.44□□□□□ -0.26
LINC02561-201ENST00000449457 CYP4F22Q6NT55 531 aa13.44□□□□□ -0.26
LINC02561-201ENST00000449457 NBPF5PQ86XG9 351 aaPredicted RBP13.44□□□□□ -0.26
LINC02561-201ENST00000449457 CNTROBQ8N137 903 aa13.44□□□□□ -0.26
LINC02561-201ENST00000449457 HACL1Q9UJ83 578 aa13.44□□□□□ -0.26
LINC02561-201ENST00000449457 KNSTRNQ9Y448 316 aa13.44□□□□□ -0.26
LINC02561-201ENST00000449457 USP16Q9Y5T5 823 aa13.44□□□□□ -0.26
LINC02561-201ENST00000449457 GJA3Q9Y6H8 435 aa13.44□□□□□ -0.26
LINC02561-201ENST00000449457 U2SURPO15042 1029 aaKnown RBP13.43□□□□□ -0.26
LINC02561-201ENST00000449457 AOC2O75106 756 aa13.43□□□□□ -0.26
LINC02561-201ENST00000449457 FKBP4Q02790 459 aaKnown RBP eCLIP13.43□□□□□ -0.26
LINC02561-201ENST00000449457 TEFQ10587 303 aa13.43□□□□□ -0.26
LINC02561-201ENST00000449457 TNRC18O15417 2968 aaPredicted RBP13.42□□□□□ -0.26
LINC02561-201ENST00000449457 RASSF10A6NK89 507 aa13.42□□□□□ -0.26
LINC02561-201ENST00000449457 TCERG1O14776 1098 aaKnown RBP13.42□□□□□ -0.26
LINC02561-201ENST00000449457 GALR2O43603 387 aaPredicted RBP13.42□□□□□ -0.26
LINC02561-201ENST00000449457 DIAPH1O60610 1272 aaKnown RBP13.42□□□□□ -0.26
LINC02561-201ENST00000449457 PPP1R37O75864 691 aa13.42□□□□□ -0.26
LINC02561-201ENST00000449457 IL6STP40189 918 aaPredicted RBP13.42□□□□□ -0.26
LINC02561-201ENST00000449457 EIF4G2P78344 907 aaKnown RBP eCLIP13.42□□□□□ -0.26
LINC02561-201ENST00000449457 DEFB115Q30KQ5 88 aa13.42□□□□□ -0.26
LINC02561-201ENST00000449457 SNED1Q8TER0 1413 aa13.41□□□□□ -0.26
LINC02561-201ENST00000449457 SYNE4Q8N205 404 aa13.41□□□□□ -0.26
LINC02561-201ENST00000449457 PCGF6Q9BYE7 350 aa13.41□□□□□ -0.26
LINC02561-201ENST00000449457 IARSP41252 1262 aaKnown RBP13.4□□□□□ -0.26
LINC02561-201ENST00000449457 EPS15P42566 896 aa13.4□□□□□ -0.26
LINC02561-201ENST00000449457 GOLGA2Q08379 1002 aa13.4□□□□□ -0.26
LINC02561-201ENST00000449457 HLFQ16534 295 aa13.4□□□□□ -0.26
LINC02561-201ENST00000449457 NUTM1Q86Y26 1132 aa13.4□□□□□ -0.26
LINC02561-201ENST00000449457 CAPNS2Q96L46 248 aa13.4□□□□□ -0.26
LINC02561-201ENST00000449457 FMNL2Q96PY5 1086 aa13.4□□□□□ -0.26
LINC02561-201ENST00000449457 GNAT3A8MTJ3 354 aa13.39□□□□□ -0.27
LINC02561-201ENST00000449457 NBPF26B4DH59 902 aa13.39□□□□□ -0.27
LINC02561-201ENST00000449457 NPR1P16066 1061 aa13.39□□□□□ -0.27
LINC02561-201ENST00000449457 DCTN1Q14203 1278 aa13.39□□□□□ -0.27
LINC02561-201ENST00000449457 NBPF10Q6P3W6 841 aaKnown RBP13.39□□□□□ -0.27
LINC02561-201ENST00000449457 NGEFQ8N5V2 710 aa13.39□□□□□ -0.27
LINC02561-201ENST00000449457 NBPF15Q8N660 670 aa13.39□□□□□ -0.27
LINC02561-201ENST00000449457 PHACTR3Q96KR7 559 aa13.39□□□□□ -0.27
LINC02561-201ENST00000449457 DDX21Q9NR30 783 aaKnown RBP eCLIP13.39□□□□□ -0.27
LINC02561-201ENST00000449457 NIP7Q9Y221 180 aaKnown RBP eCLIP13.39□□□□□ -0.27
LINC02561-201ENST00000449457 CASP8AP2Q9UKL3 1982 aa13.38□□□□□ -0.27
LINC02561-201ENST00000449457 BTBD11A6QL63 1104 aa13.38□□□□□ -0.27
LINC02561-201ENST00000449457 TIE1P35590 1138 aa13.38□□□□□ -0.27
LINC02561-201ENST00000449457 SCNN1DP51172 638 aa13.38□□□□□ -0.27
LINC02561-201ENST00000449457 DLK2Q6UY11 383 aa13.38□□□□□ -0.27
LINC02561-201ENST00000449457 MCM10Q7L590 875 aa13.38□□□□□ -0.27
LINC02561-201ENST00000449457 TRPM7Q96QT4 1865 aa13.38□□□□□ -0.27
LINC02561-201ENST00000449457 KIF7Q2M1P5 1343 aa13.38□□□□□ -0.27
LINC02561-201ENST00000449457 TTLL13PA6NNM8 815 aa13.37□□□□□ -0.27
LINC02561-201ENST00000449457 FZD9O00144 591 aa13.37□□□□□ -0.27
LINC02561-201ENST00000449457 SOGA3Q5TF21 947 aa13.37□□□□□ -0.27
LINC02561-201ENST00000449457 CST9Q5W186 159 aa13.37□□□□□ -0.27
LINC02561-201ENST00000449457 C3orf67Q6ZVT6 689 aa13.37□□□□□ -0.27
LINC02561-201ENST00000449457 NPM2Q86SE8 214 aaKnown RBP13.37□□□□□ -0.27
LINC02561-201ENST00000449457 PDZRN3Q9UPQ7 1066 aa13.37□□□□□ -0.27
LINC02561-201ENST00000449457 CEMIPQ8WUJ3 1361 aa13.36□□□□□ -0.27
LINC02561-201ENST00000449457 PRKAR2BP31323 418 aa13.36□□□□□ -0.27
LINC02561-201ENST00000449457 MLLT1Q03111 559 aaPredicted RBP13.36□□□□□ -0.27
LINC02561-201ENST00000449457 ZNF428Q96B54 188 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms