RNA–Protein interactions for RNA: ENST00000448087.5

GTF3C3-205, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 1,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-205ENST00000448087 ARSDP51689 593 aa8.2□□□□□ -1.1
GTF3C3-205ENST00000448087 KCNQ4P56696 695 aa8.2□□□□□ -1.1
GTF3C3-205ENST00000448087 SF3B2Q13435 895 aaKnown RBP8.2□□□□□ -1.1
GTF3C3-205ENST00000448087 GRIN2CQ14957 1233 aa8.2□□□□□ -1.1
GTF3C3-205ENST00000448087 H3BRB1 525 aa8.2□□□□□ -1.1
GTF3C3-205ENST00000448087 ICMTO60725 284 aa8.2□□□□□ -1.1
GTF3C3-205ENST00000448087 GRNP28799 593 aaKnown RBP8.2□□□□□ -1.1
GTF3C3-205ENST00000448087 TUT1Q9H6E5 874 aaKnown RBP8.2□□□□□ -1.1
GTF3C3-205ENST00000448087 KCNH4Q9UQ05 1017 aa8.2□□□□□ -1.1
GTF3C3-205ENST00000448087 USP20Q9Y2K6 914 aa8.2□□□□□ -1.1
GTF3C3-205ENST00000448087 IVNS1ABPQ9Y6Y0 642 aa8.2□□□□□ -1.1
GTF3C3-205ENST00000448087 C2CD2LO14523 706 aa8.19□□□□□ -1.1
GTF3C3-205ENST00000448087 NPR3P17342 541 aa8.19□□□□□ -1.1
GTF3C3-205ENST00000448087 ZAP70P43403 619 aa8.19□□□□□ -1.1
GTF3C3-205ENST00000448087 FAM182BQ5T319 152 aa8.19□□□□□ -1.1
GTF3C3-205ENST00000448087 ATCAYQ86WG3 371 aa8.19□□□□□ -1.1
GTF3C3-205ENST00000448087 KCTD17Q8N5Z5 321 aa8.19□□□□□ -1.1
GTF3C3-205ENST00000448087 FAM13AO94988 1023 aa8.18□□□□□ -1.1
GTF3C3-205ENST00000448087 BMP4P12644 408 aa8.18□□□□□ -1.1
GTF3C3-205ENST00000448087 EPB42P16452 691 aa8.18□□□□□ -1.1
GTF3C3-205ENST00000448087 EIF1AXP47813 144 aaKnown RBP8.18□□□□□ -1.1
GTF3C3-205ENST00000448087 NOM1Q5C9Z4 860 aaKnown RBP8.18□□□□□ -1.1
GTF3C3-205ENST00000448087 RGL4Q8IZJ4 473 aa8.18□□□□□ -1.1
GTF3C3-205ENST00000448087 IGF1RP08069 1367 aa8.18□□□□□ -1.1
GTF3C3-205ENST00000448087 SRSF11Q05519 484 aaKnown RBP8.17□□□□□ -1.1
GTF3C3-205ENST00000448087 GLYCTKQ8IVS8 523 aa8.17□□□□□ -1.1
GTF3C3-205ENST00000448087 RTCBQ9Y3I0 505 aaKnown RBP8.17□□□□□ -1.1
GTF3C3-205ENST00000448087 SOWAHDA6NJG2 315 aa8.17□□□□□ -1.1
GTF3C3-205ENST00000448087 PATL2C9JE40 543 aaKnown RBP8.17□□□□□ -1.1
GTF3C3-205ENST00000448087 SLC30A3Q99726 388 aa8.17□□□□□ -1.1
GTF3C3-205ENST00000448087 NSFL1CQ9UNZ2 370 aaKnown RBP8.17□□□□□ -1.1
GTF3C3-205ENST00000448087 ADAMTS2O95450 1211 aa8.16□□□□□ -1.1
GTF3C3-205ENST00000448087 SPEM2Q0P670 501 aa8.16□□□□□ -1.1
GTF3C3-205ENST00000448087 ECM1Q16610 540 aa8.16□□□□□ -1.1
GTF3C3-205ENST00000448087 GPR152Q8TDT2 470 aa8.16□□□□□ -1.1
GTF3C3-205ENST00000448087 WIPF1O43516 503 aa8.15□□□□□ -1.1
GTF3C3-205ENST00000448087 MAP2K3P46734 347 aa8.15□□□□□ -1.1
GTF3C3-205ENST00000448087 CMTR1Q8N1G2 835 aaKnown RBP8.15□□□□□ -1.1
GTF3C3-205ENST00000448087 AAMPQ13685 434 aa8.15□□□□□ -1.11
GTF3C3-205ENST00000448087 ALKBH2Q6NS38 261 aa8.15□□□□□ -1.11
GTF3C3-205ENST00000448087 RAB44Q7Z6P3 723 aaPredicted RBP8.15□□□□□ -1.11
GTF3C3-205ENST00000448087 PIK3R5Q8WYR1 880 aa8.15□□□□□ -1.11
GTF3C3-205ENST00000448087 GSX2Q9BZM3 304 aa8.15□□□□□ -1.11
GTF3C3-205ENST00000448087 FAM13BQ9NYF5 915 aa8.15□□□□□ -1.11
GTF3C3-205ENST00000448087 PRR12Q9ULL5 1215 aa8.15□□□□□ -1.11
GTF3C3-205ENST00000448087 KCNMB2Q9Y691 235 aa8.15□□□□□ -1.11
GTF3C3-205ENST00000448087 SLURP2P0DP57 97 aa8.14□□□□□ -1.11
GTF3C3-205ENST00000448087 EDEM1Q92611 657 aa8.14□□□□□ -1.11
GTF3C3-205ENST00000448087 XYLBO75191 536 aa8.13□□□□□ -1.11
GTF3C3-205ENST00000448087 ARHGAP4P98171 946 aa8.13□□□□□ -1.11
GTF3C3-205ENST00000448087 DNM1Q05193 864 aaKnown RBP8.13□□□□□ -1.11
GTF3C3-205ENST00000448087 CCINQ13939 588 aa8.13□□□□□ -1.11
GTF3C3-205ENST00000448087 TRIP4Q15650 581 aaPredicted RBP8.13□□□□□ -1.11
GTF3C3-205ENST00000448087 ZNF468Q5VIY5 522 aaPredicted RBP8.13□□□□□ -1.11
GTF3C3-205ENST00000448087 FZD6O60353 706 aa8.12□□□□□ -1.11
GTF3C3-205ENST00000448087 BHMTQ93088 406 aa8.12□□□□□ -1.11
GTF3C3-205ENST00000448087 NUDT16Q96DE0 195 aaKnown RBP8.12□□□□□ -1.11
GTF3C3-205ENST00000448087 OXCT2Q9BYC2 517 aaPredicted RBP8.12□□□□□ -1.11
GTF3C3-205ENST00000448087 PDGFAP04085 211 aa8.12□□□□□ -1.11
GTF3C3-205ENST00000448087 ARAFP10398 606 aa8.12□□□□□ -1.11
GTF3C3-205ENST00000448087 PCBP4P57723 403 aaKnown RBP8.12□□□□□ -1.11
GTF3C3-205ENST00000448087 KRT25Q7Z3Z0 450 aa8.12□□□□□ -1.11
GTF3C3-205ENST00000448087 SYT9Q86SS6 491 aa8.12□□□□□ -1.11
GTF3C3-205ENST00000448087 ACDQ96AP0 544 aa8.12□□□□□ -1.11
GTF3C3-205ENST00000448087 C11orf16Q9NQ32 467 aa8.12□□□□□ -1.11
GTF3C3-205ENST00000448087 CCDC87Q9NVE4 849 aa8.12□□□□□ -1.11
GTF3C3-205ENST00000448087 BIN2Q9UBW5 565 aaPredicted RBP8.12□□□□□ -1.11
GTF3C3-205ENST00000448087 POLIQ9UNA4 740 aa8.12□□□□□ -1.11
GTF3C3-205ENST00000448087 UBAP1LF5GYI3 381 aa8.11□□□□□ -1.11
GTF3C3-205ENST00000448087 EGFRP00533 1210 aa8.11□□□□□ -1.11
GTF3C3-205ENST00000448087 MZF1P28698 734 aaPredicted RBP8.11□□□□□ -1.11
GTF3C3-205ENST00000448087 PNMA5Q96PV4 448 aa8.11□□□□□ -1.11
GTF3C3-205ENST00000448087 AVENQ9NQS1 362 aaPredicted RBP8.11□□□□□ -1.11
GTF3C3-205ENST00000448087 KLF15Q9UIH9 416 aa8.11□□□□□ -1.11
GTF3C3-205ENST00000448087 GGA1Q9UJY5 639 aa8.11□□□□□ -1.11
GTF3C3-205ENST00000448087 SASH3O75995 380 aa8.1□□□□□ -1.11
GTF3C3-205ENST00000448087 ADH6P28332 368 aa8.1□□□□□ -1.11
GTF3C3-205ENST00000448087 NEUROD1Q13562 356 aa8.1□□□□□ -1.11
GTF3C3-205ENST00000448087 WHAMMQ8TF30 809 aa8.1□□□□□ -1.11
GTF3C3-205ENST00000448087 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.1□□□□□ -1.11
GTF3C3-205ENST00000448087 NEURL1BA8MQ27 555 aa8.09□□□□□ -1.11
GTF3C3-205ENST00000448087 PCSK2P16519 638 aa8.09□□□□□ -1.11
GTF3C3-205ENST00000448087 NFKB1P19838 968 aa8.09□□□□□ -1.11
GTF3C3-205ENST00000448087 TARSP26639 723 aaKnown RBP8.09□□□□□ -1.11
GTF3C3-205ENST00000448087 EFCC1Q9HA90 598 aa8.09□□□□□ -1.11
GTF3C3-205ENST00000448087 ZFATQ9P243 1243 aa8.09□□□□□ -1.11
GTF3C3-205ENST00000448087 LYPD4Q6UWN0 246 aa8.09□□□□□ -1.11
GTF3C3-205ENST00000448087 GOLGA6L1Q8N7Z2 621 aa8.09□□□□□ -1.11
GTF3C3-205ENST00000448087 GGNBP2Q9H3C7 697 aa8.09□□□□□ -1.11
GTF3C3-205ENST00000448087 GDF2Q9UK05 429 aaPredicted RBP8.09□□□□□ -1.11
GTF3C3-205ENST00000448087 BRPF3Q9ULD4 1205 aa8.09□□□□□ -1.11
GTF3C3-205ENST00000448087 FNDC3AQ9Y2H6 1198 aaKnown RBP8.09□□□□□ -1.11
GTF3C3-205ENST00000448087 RPLP1P05386 114 aaKnown RBP8.08□□□□□ -1.12
GTF3C3-205ENST00000448087 RARAP10276 462 aa8.08□□□□□ -1.12
GTF3C3-205ENST00000448087 LORP23490 312 aaPredicted RBP8.08□□□□□ -1.12
GTF3C3-205ENST00000448087 FCHSD1Q86WN1 690 aa8.08□□□□□ -1.12
GTF3C3-205ENST00000448087 A6NHS1 94 aa8.07□□□□□ -1.12
GTF3C3-205ENST00000448087 SIN3BO75182 1162 aa8.07□□□□□ -1.12
GTF3C3-205ENST00000448087 C8orf34Q49A92 452 aa8.07□□□□□ -1.12
GTF3C3-205ENST00000448087 ZNF385CQ66K41 422 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms