RNA–Protein interactions for RNA: ENST00000445569.6

CALD1-211, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-211ENST00000445569 SDSP20132 328 aa12.79□□□□□ -0.36
CALD1-211ENST00000445569 BAG6P46379 1132 aa12.79□□□□□ -0.36
CALD1-211ENST00000445569 PIP4K2AP48426 406 aaPredicted RBP12.79□□□□□ -0.36
CALD1-211ENST00000445569 TTLL7Q6ZT98 887 aa12.79□□□□□ -0.36
CALD1-211ENST00000445569 MAP3K15Q6ZN16 1313 aa12.79□□□□□ -0.36
CALD1-211ENST00000445569 BCORQ6W2J9 1755 aa12.79□□□□□ -0.36
CALD1-211ENST00000445569 H7C1W4 665 aa12.78□□□□□ -0.36
CALD1-211ENST00000445569 GLRX3O76003 335 aaKnown RBP12.78□□□□□ -0.36
CALD1-211ENST00000445569 CYP19A1P11511 503 aaPredicted RBP12.78□□□□□ -0.36
CALD1-211ENST00000445569 PRIM1P49642 420 aaKnown RBP12.78□□□□□ -0.36
CALD1-211ENST00000445569 TRIM28Q13263 835 aaKnown RBP12.78□□□□□ -0.36
CALD1-211ENST00000445569 ANP32EQ9BTT0 268 aa12.78□□□□□ -0.36
CALD1-211ENST00000445569 ZBTB3Q9H5J0 574 aa12.78□□□□□ -0.36
CALD1-211ENST00000445569 IL1RAPL2Q9NP60 686 aa12.78□□□□□ -0.36
CALD1-211ENST00000445569 LAMB2P55268 1798 aa12.78□□□□□ -0.36
CALD1-211ENST00000445569 PALLDQ8WX93 1383 aa12.78□□□□□ -0.36
CALD1-211ENST00000445569 MYH3P11055 1940 aa12.78□□□□□ -0.36
CALD1-211ENST00000445569 KAT6BQ8WYB5 2073 aa12.77□□□□□ -0.36
CALD1-211ENST00000445569 NUP98P52948 1817 aa12.77□□□□□ -0.37
CALD1-211ENST00000445569 ATP5J2-PTCD1G3V325 749 aa12.77□□□□□ -0.37
CALD1-211ENST00000445569 EPB41L2O43491 1005 aaKnown RBP12.77□□□□□ -0.37
CALD1-211ENST00000445569 IFIT2P09913 472 aaKnown RBP12.77□□□□□ -0.37
CALD1-211ENST00000445569 IL6STP40189 918 aaPredicted RBP12.77□□□□□ -0.37
CALD1-211ENST00000445569 CASP7P55210 303 aa12.77□□□□□ -0.37
CALD1-211ENST00000445569 TCIRG1Q13488 830 aa12.77□□□□□ -0.37
CALD1-211ENST00000445569 CNTROBQ8N137 903 aa12.77□□□□□ -0.37
CALD1-211ENST00000445569 MARCH10Q8NA82 808 aaPredicted RBP12.77□□□□□ -0.37
CALD1-211ENST00000445569 KAZALD1Q96I82 304 aa12.77□□□□□ -0.37
CALD1-211ENST00000445569 ISCA1Q9BUE6 129 aa12.77□□□□□ -0.37
CALD1-211ENST00000445569 BCL11AQ9H165 835 aa12.77□□□□□ -0.37
CALD1-211ENST00000445569 COPRSQ9NQ92 184 aa12.77□□□□□ -0.37
CALD1-211ENST00000445569 TRIM37O94972 964 aa12.76□□□□□ -0.37
CALD1-211ENST00000445569 EN1Q05925 392 aaPredicted RBP12.76□□□□□ -0.37
CALD1-211ENST00000445569 HSCBQ8IWL3 235 aa12.76□□□□□ -0.37
CALD1-211ENST00000445569 ECHDC1Q9NTX5 307 aa12.76□□□□□ -0.37
CALD1-211ENST00000445569 SCN7AQ01118 1682 aa12.76□□□□□ -0.37
CALD1-211ENST00000445569 TRIM6-TRIM34B2RNG4 842 aa12.75□□□□□ -0.37
CALD1-211ENST00000445569 ERVV-1B6SEH8 477 aa12.75□□□□□ -0.37
CALD1-211ENST00000445569 BTAF1O14981 1849 aa12.75□□□□□ -0.37
CALD1-211ENST00000445569 PCCAP05165 728 aaPredicted RBP12.75□□□□□ -0.37
CALD1-211ENST00000445569 GIGYF2Q6Y7W6 1299 aaKnown RBP12.75□□□□□ -0.37
CALD1-211ENST00000445569 IL27Q8NEV9 243 aa12.75□□□□□ -0.37
CALD1-211ENST00000445569 CDHR2Q9BYE9 1310 aa12.75□□□□□ -0.37
CALD1-211ENST00000445569 CCDC87Q9NVE4 849 aa12.75□□□□□ -0.37
CALD1-211ENST00000445569 ZNF330Q9Y3S2 320 aaPredicted RBP12.75□□□□□ -0.37
CALD1-211ENST00000445569 MCCP23508 829 aa12.74□□□□□ -0.37
CALD1-211ENST00000445569 AACSQ86V21 672 aa12.74□□□□□ -0.37
CALD1-211ENST00000445569 NUTM1Q86Y26 1132 aa12.74□□□□□ -0.37
CALD1-211ENST00000445569 FBXO3Q9UK99 471 aa12.74□□□□□ -0.37
CALD1-211ENST00000445569 PA2G4Q9UQ80 394 aaKnown RBP12.74□□□□□ -0.37
CALD1-211ENST00000445569 SPEF2Q9C093 1822 aa12.74□□□□□ -0.37
CALD1-211ENST00000445569 RFX7Q2KHR2 1363 aa12.73□□□□□ -0.37
CALD1-211ENST00000445569 LOC102724428A0A0B4J2F2 783 aa12.73□□□□□ -0.37
CALD1-211ENST00000445569 HIP1O00291 1037 aa12.73□□□□□ -0.37
CALD1-211ENST00000445569 APBA3O96018 575 aa12.73□□□□□ -0.37
CALD1-211ENST00000445569 RFX5P48382 616 aaPredicted RBP12.73□□□□□ -0.37
CALD1-211ENST00000445569 SIK1P57059 783 aa12.73□□□□□ -0.37
CALD1-211ENST00000445569 PI4K2BQ8TCG2 481 aa12.73□□□□□ -0.37
CALD1-211ENST00000445569 SNX21Q969T3 373 aa12.73□□□□□ -0.37
CALD1-211ENST00000445569 RILPL2Q969X0 211 aa12.73□□□□□ -0.37
CALD1-211ENST00000445569 CAMKK2Q96RR4 588 aa12.73□□□□□ -0.37
CALD1-211ENST00000445569 PLA2G12BQ9BX93 195 aa12.73□□□□□ -0.37
CALD1-211ENST00000445569 ZBTB1Q9Y2K1 713 aa12.73□□□□□ -0.37
CALD1-211ENST00000445569 LRP5O75197 1615 aa12.73□□□□□ -0.37
CALD1-211ENST00000445569 SRCAPQ6ZRS2 3230 aa12.72□□□□□ -0.37
CALD1-211ENST00000445569 RGL2O15211 777 aa12.72□□□□□ -0.37
CALD1-211ENST00000445569 CIAO1O76071 339 aa12.72□□□□□ -0.37
CALD1-211ENST00000445569 HSP90B1P14625 803 aaKnown RBP12.72□□□□□ -0.37
CALD1-211ENST00000445569 RABEP1Q15276 862 aa12.72□□□□□ -0.37
CALD1-211ENST00000445569 EZH2Q15910 746 aaKnown RBP12.72□□□□□ -0.37
CALD1-211ENST00000445569 EPHA10Q5JZY3 1008 aa12.72□□□□□ -0.37
CALD1-211ENST00000445569 LMBR1LQ6UX01 489 aa12.72□□□□□ -0.37
CALD1-211ENST00000445569 DZIP3Q86Y13 1208 aaKnown RBP12.72□□□□□ -0.37
CALD1-211ENST00000445569 ZBTB38Q8NAP3 1195 aaPredicted RBP12.72□□□□□ -0.37
CALD1-211ENST00000445569 RUFY2Q8WXA3 655 aa12.72□□□□□ -0.37
CALD1-211ENST00000445569 SLC4A9Q96Q91 983 aa12.72□□□□□ -0.37
CALD1-211ENST00000445569 ESYT1Q9BSJ8 1104 aa12.72□□□□□ -0.37
CALD1-211ENST00000445569 SIL1Q9H173 461 aa12.72□□□□□ -0.37
CALD1-211ENST00000445569 ZNF609O15014 1411 aa12.71□□□□□ -0.37
CALD1-211ENST00000445569 LY75O60449 1722 aa12.71□□□□□ -0.37
CALD1-211ENST00000445569 RAD50Q92878 1312 aa12.71□□□□□ -0.37
CALD1-211ENST00000445569 SASH1O94885 1247 aa12.71□□□□□ -0.37
CALD1-211ENST00000445569 CHMLP26374 656 aa12.71□□□□□ -0.37
CALD1-211ENST00000445569 ATP6V1AP38606 617 aa12.71□□□□□ -0.37
CALD1-211ENST00000445569 CRKLP46109 303 aaKnown RBP12.71□□□□□ -0.37
CALD1-211ENST00000445569 FOXO4P98177 505 aa12.71□□□□□ -0.37
CALD1-211ENST00000445569 PTPN12Q05209 780 aaKnown RBP12.71□□□□□ -0.37
CALD1-211ENST00000445569 TSHZ3Q63HK5 1081 aa12.71□□□□□ -0.37
CALD1-211ENST00000445569 ACSBG1Q96GR2 724 aa12.71□□□□□ -0.37
CALD1-211ENST00000445569 GPR108Q9NPR9 543 aa12.71□□□□□ -0.37
CALD1-211ENST00000445569 CHMP3Q9Y3E7 222 aa12.71□□□□□ -0.37
CALD1-211ENST00000445569 CNTNAP4Q9C0A0 1308 aa12.7□□□□□ -0.38
CALD1-211ENST00000445569 SBF2Q86WG5 1849 aa12.7□□□□□ -0.38
CALD1-211ENST00000445569 IL15P40933 162 aaPredicted RBP12.7□□□□□ -0.38
CALD1-211ENST00000445569 EIF5P55010 431 aaKnown RBP12.7□□□□□ -0.38
CALD1-211ENST00000445569 EVI5LQ96CN4 794 aa12.7□□□□□ -0.38
CALD1-211ENST00000445569 AK7Q96M32 723 aa12.7□□□□□ -0.38
CALD1-211ENST00000445569 TBC1D2Q9BYX2 928 aa12.7□□□□□ -0.38
CALD1-211ENST00000445569 DIAPH3Q9NSV4 1193 aa12.7□□□□□ -0.38
CALD1-211ENST00000445569 ZNF652Q9Y2D9 606 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms