RNA–Protein interactions for RNA: ENST00000445357.1

NCLP1-201, Transcript of nucleolin pseudogene 1, humanhuman

BASIC

Gene NCLP1, Length 1,963 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP1-201ENST00000445357 HIP1O00291 1037 aa17.09■□□□□ 0.33
NCLP1-201ENST00000445357 RFX5P48382 616 aaPredicted RBP17.09■□□□□ 0.33
NCLP1-201ENST00000445357 KCNB2Q92953 911 aa17.09■□□□□ 0.33
NCLP1-201ENST00000445357 TTC14Q96N46 770 aa17.09■□□□□ 0.33
NCLP1-201ENST00000445357 SNRKQ9NRH2 765 aa17.09■□□□□ 0.33
NCLP1-201ENST00000445357 CASP7P55210 303 aa17.09■□□□□ 0.33
NCLP1-201ENST00000445357 LMBRD1Q9NUN5 540 aa17.09■□□□□ 0.33
NCLP1-201ENST00000445357 BRD1O95696 1058 aa17.08■□□□□ 0.33
NCLP1-201ENST00000445357 PIP4K2AP48426 406 aaPredicted RBP17.08■□□□□ 0.33
NCLP1-201ENST00000445357 MCTP1Q6DN14 999 aa17.08■□□□□ 0.33
NCLP1-201ENST00000445357 NBPF26B4DH59 902 aa17.08■□□□□ 0.32
NCLP1-201ENST00000445357 IL2RBP14784 551 aa17.08■□□□□ 0.32
NCLP1-201ENST00000445357 NBPF14Q5TI25 921 aa17.08■□□□□ 0.32
NCLP1-201ENST00000445357 NBPF10Q6P3W6 841 aaKnown RBP17.08■□□□□ 0.32
NCLP1-201ENST00000445357 RASEFQ8IZ41 740 aa17.08■□□□□ 0.32
NCLP1-201ENST00000445357 NBPF15Q8N660 670 aa17.08■□□□□ 0.32
NCLP1-201ENST00000445357 GRPEL1Q9HAV7 217 aa17.08■□□□□ 0.32
NCLP1-201ENST00000445357 DDX49Q9Y6V7 483 aaKnown RBP17.08■□□□□ 0.32
NCLP1-201ENST00000445357 UBE3BQ7Z3V4 1068 aa17.07■□□□□ 0.32
NCLP1-201ENST00000445357 CCDC8Q9H0W5 538 aaPredicted RBP17.07■□□□□ 0.32
NCLP1-201ENST00000445357 SIL1Q9H173 461 aa17.07■□□□□ 0.32
NCLP1-201ENST00000445357 TLR7Q9NYK1 1049 aaKnown RBP17.07■□□□□ 0.32
NCLP1-201ENST00000445357 CCDC171Q6TFL3 1326 aa17.06■□□□□ 0.32
NCLP1-201ENST00000445357 PTPN12Q05209 780 aaKnown RBP17.06■□□□□ 0.32
NCLP1-201ENST00000445357 KLHDC4Q8TBB5 520 aa17.06■□□□□ 0.32
NCLP1-201ENST00000445357 TM6SF1Q9BZW5 370 aa17.06■□□□□ 0.32
NCLP1-201ENST00000445357 A0A087WZG4 1122 aa17.05■□□□□ 0.32
NCLP1-201ENST00000445357 PTH1RQ03431 593 aa17.05■□□□□ 0.32
NCLP1-201ENST00000445357 RFX7Q2KHR2 1363 aa17.05■□□□□ 0.32
NCLP1-201ENST00000445357 JCADQ9P266 1359 aa17.05■□□□□ 0.32
NCLP1-201ENST00000445357 H7C1W4 665 aa17.04■□□□□ 0.32
NCLP1-201ENST00000445357 NOL8Q76FK4 1167 aaKnown RBP17.04■□□□□ 0.32
NCLP1-201ENST00000445357 MED23Q9ULK4 1368 aa17.04■□□□□ 0.32
NCLP1-201ENST00000445357 ATP5J2-PTCD1G3V325 749 aa17.04■□□□□ 0.32
NCLP1-201ENST00000445357 PTCD1O75127 700 aaKnown RBP17.04■□□□□ 0.32
NCLP1-201ENST00000445357 NMIQ13287 307 aaPredicted RBP17.04■□□□□ 0.32
NCLP1-201ENST00000445357 NECTIN1Q15223 517 aa17.04■□□□□ 0.32
NCLP1-201ENST00000445357 GAS2L3Q86XJ1 694 aa17.04■□□□□ 0.32
NCLP1-201ENST00000445357 ATP5JP18859 108 aa17.03■□□□□ 0.32
NCLP1-201ENST00000445357 TNNI3KQ59H18 835 aa17.03■□□□□ 0.32
NCLP1-201ENST00000445357 PANK2Q9BZ23 570 aa17.03■□□□□ 0.32
NCLP1-201ENST00000445357 FPGT-TNNI3KV9GXZ4 949 aa17.03■□□□□ 0.32
NCLP1-201ENST00000445357 AK2P54819 239 aa17.02■□□□□ 0.32
NCLP1-201ENST00000445357 FAM43AQ8N2R8 423 aa17.02■□□□□ 0.32
NCLP1-201ENST00000445357 MAP4K1Q92918 833 aa17.02■□□□□ 0.32
NCLP1-201ENST00000445357 ARXQ96QS3 562 aa17.02■□□□□ 0.32
NCLP1-201ENST00000445357 DBNLQ9UJU6 430 aaKnown RBP17.02■□□□□ 0.32
NCLP1-201ENST00000445357 LIMCH1Q9UPQ0 1083 aa17.02■□□□□ 0.32
NCLP1-201ENST00000445357 ZNF445P59923 1031 aa17.02■□□□□ 0.31
NCLP1-201ENST00000445357 FOXO4P98177 505 aa17.02■□□□□ 0.31
NCLP1-201ENST00000445357 VPS53Q5VIR6 699 aa17.02■□□□□ 0.31
NCLP1-201ENST00000445357 TTLL7Q6ZT98 887 aa17.02■□□□□ 0.31
NCLP1-201ENST00000445357 RUFY3Q7L099 469 aa17.02■□□□□ 0.31
NCLP1-201ENST00000445357 JARID2Q92833 1246 aaPredicted RBP17.02■□□□□ 0.31
NCLP1-201ENST00000445357 FAM227BQ96M60 508 aa17.02■□□□□ 0.31
NCLP1-201ENST00000445357 BOLA2Q9H3K6 86 aa17.02■□□□□ 0.31
NCLP1-201ENST00000445357 ZSWIM6Q9HCJ5 1215 aa17.02■□□□□ 0.31
NCLP1-201ENST00000445357 CWC25Q9NXE8 425 aaPredicted RBP17.02■□□□□ 0.31
NCLP1-201ENST00000445357 ITGB4P16144 1822 aa17.02■□□□□ 0.31
NCLP1-201ENST00000445357 PRPF40BQ6NWY9 871 aaKnown RBP17.01■□□□□ 0.31
NCLP1-201ENST00000445357 FSD1Q9BTV5 496 aa17.01■□□□□ 0.31
NCLP1-201ENST00000445357 RPAP1Q9BWH6 1393 aaPredicted RBP17.01■□□□□ 0.31
NCLP1-201ENST00000445357 PRPF40AO75400 957 aaKnown RBP17■□□□□ 0.31
NCLP1-201ENST00000445357 CASTP20810 708 aaKnown RBP17■□□□□ 0.31
NCLP1-201ENST00000445357 TFCP2Q12800 502 aa17■□□□□ 0.31
NCLP1-201ENST00000445357 RBM8AQ9Y5S9 174 aaKnown RBP17■□□□□ 0.31
NCLP1-201ENST00000445357 WDR33Q9C0J8 1336 aaKnown RBP17■□□□□ 0.31
NCLP1-201ENST00000445357 A0A0D9SFI3 127 aa17■□□□□ 0.31
NCLP1-201ENST00000445357 A1BGP04217 495 aa17■□□□□ 0.31
NCLP1-201ENST00000445357 CCDC191Q8NCU4 936 aa17■□□□□ 0.31
NCLP1-201ENST00000445357 PLCH1Q4KWH8 1693 aa17■□□□□ 0.31
NCLP1-201ENST00000445357 COL14A1Q05707 1796 aaKnown RBP17■□□□□ 0.31
NCLP1-201ENST00000445357 ZKSCAN1P17029 563 aaPredicted RBP16.99■□□□□ 0.31
NCLP1-201ENST00000445357 CREB3L3Q68CJ9 461 aa16.99■□□□□ 0.31
NCLP1-201ENST00000445357 LMBR1LQ6UX01 489 aa16.99■□□□□ 0.31
NCLP1-201ENST00000445357 DDX54Q8TDD1 881 aaKnown RBP16.99■□□□□ 0.31
NCLP1-201ENST00000445357 JAKMIP1Q96N16 626 aaKnown RBP16.99■□□□□ 0.31
NCLP1-201ENST00000445357 RTN4Q9NQC3 1192 aaKnown RBP16.99■□□□□ 0.31
NCLP1-201ENST00000445357 CYP46A1Q9Y6A2 500 aa16.99■□□□□ 0.31
NCLP1-201ENST00000445357 EVA1CP58658 441 aa16.98■□□□□ 0.31
NCLP1-201ENST00000445357 ADCK5Q3MIX3 580 aa16.98■□□□□ 0.31
NCLP1-201ENST00000445357 GPT2Q8TD30 523 aa16.98■□□□□ 0.31
NCLP1-201ENST00000445357 STRN4Q9NRL3 753 aa16.98■□□□□ 0.31
NCLP1-201ENST00000445357 LRP6O75581 1613 aa16.98■□□□□ 0.31
NCLP1-201ENST00000445357 TCHHQ07283 1943 aa16.98■□□□□ 0.31
NCLP1-201ENST00000445357 SPEF2Q9C093 1822 aa16.98■□□□□ 0.31
NCLP1-201ENST00000445357 ZSCAN31Q96LW9 406 aaPredicted RBP16.98■□□□□ 0.31
NCLP1-201ENST00000445357 GPR108Q9NPR9 543 aa16.98■□□□□ 0.31
NCLP1-201ENST00000445357 PDRG1Q9NUG6 133 aa16.98■□□□□ 0.31
NCLP1-201ENST00000445357 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.98■□□□□ 0.31
NCLP1-201ENST00000445357 MBD3O95983 291 aa16.97■□□□□ 0.31
NCLP1-201ENST00000445357 CAVIN1Q6NZI2 390 aaKnown RBP16.97■□□□□ 0.31
NCLP1-201ENST00000445357 SH2B1Q9NRF2 756 aaPredicted RBP16.97■□□□□ 0.31
NCLP1-201ENST00000445357 WNK3Q9BYP7 1800 aa16.97■□□□□ 0.31
NCLP1-201ENST00000445357 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.97■□□□□ 0.31
NCLP1-201ENST00000445357 SLC27A2O14975 620 aa16.97■□□□□ 0.31
NCLP1-201ENST00000445357 ZSCAN23Q3MJ62 389 aa16.97■□□□□ 0.31
NCLP1-201ENST00000445357 DBNDD2Q9BQY9 259 aa16.97■□□□□ 0.31
NCLP1-201ENST00000445357 DISP2A7MBM2 1401 aa16.96■□□□□ 0.31
NCLP1-201ENST00000445357 CPA1P15085 419 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms