RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 CYP19A1P11511 503 aaPredicted RBP14.35□□□□□ -0.11
SMAD3-202ENST00000439724 NUTM2AQ8IVF1 878 aaPredicted RBP14.35□□□□□ -0.11
SMAD3-202ENST00000439724 KLHDC4Q8TBB5 520 aa14.35□□□□□ -0.11
SMAD3-202ENST00000439724 SIL1Q9H173 461 aa14.35□□□□□ -0.11
SMAD3-202ENST00000439724 CHMP5Q9NZZ3 219 aa14.35□□□□□ -0.11
SMAD3-202ENST00000439724 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.35□□□□□ -0.11
SMAD3-202ENST00000439724 RREB1Q92766 1687 aa14.34□□□□□ -0.11
SMAD3-202ENST00000439724 MAP3K15Q6ZN16 1313 aa14.34□□□□□ -0.11
SMAD3-202ENST00000439724 MCCP23508 829 aa14.34□□□□□ -0.11
SMAD3-202ENST00000439724 DDIT3P35638 169 aa14.34□□□□□ -0.11
SMAD3-202ENST00000439724 PRIM1P49642 420 aaKnown RBP14.34□□□□□ -0.11
SMAD3-202ENST00000439724 ANAPC15P60006 121 aa14.34□□□□□ -0.11
SMAD3-202ENST00000439724 LMBR1LQ6UX01 489 aa14.34□□□□□ -0.11
SMAD3-202ENST00000439724 KAT6BQ8WYB5 2073 aa14.34□□□□□ -0.11
SMAD3-202ENST00000439724 SGSM2O43147 1006 aa14.33□□□□□ -0.12
SMAD3-202ENST00000439724 EVI5LQ96CN4 794 aa14.33□□□□□ -0.12
SMAD3-202ENST00000439724 ANO2Q9NQ90 1003 aa14.33□□□□□ -0.12
SMAD3-202ENST00000439724 CIZ1Q9ULV3 898 aaPredicted RBP14.33□□□□□ -0.12
SMAD3-202ENST00000439724 JCADQ9P266 1359 aa14.33□□□□□ -0.12
SMAD3-202ENST00000439724 UBAP1LF5GYI3 381 aa14.32□□□□□ -0.12
SMAD3-202ENST00000439724 MAP4K4O95819 1239 aaPredicted RBP14.32□□□□□ -0.12
SMAD3-202ENST00000439724 GIGYF2Q6Y7W6 1299 aaKnown RBP14.32□□□□□ -0.12
SMAD3-202ENST00000439724 MARCH10Q8NA82 808 aaPredicted RBP14.32□□□□□ -0.12
SMAD3-202ENST00000439724 SYTL4Q96C24 671 aaPredicted RBP14.32□□□□□ -0.12
SMAD3-202ENST00000439724 PCCAP05165 728 aaPredicted RBP14.31□□□□□ -0.12
SMAD3-202ENST00000439724 HSP90AB3PQ58FF7 597 aa14.31□□□□□ -0.12
SMAD3-202ENST00000439724 TNNI3KQ59H18 835 aa14.31□□□□□ -0.12
SMAD3-202ENST00000439724 SPRYD3Q8NCJ5 442 aa14.31□□□□□ -0.12
SMAD3-202ENST00000439724 IL27Q8NEV9 243 aa14.31□□□□□ -0.12
SMAD3-202ENST00000439724 PLA2G12BQ9BX93 195 aa14.31□□□□□ -0.12
SMAD3-202ENST00000439724 CCDC8Q9H0W5 538 aaPredicted RBP14.31□□□□□ -0.12
SMAD3-202ENST00000439724 FPGT-TNNI3KV9GXZ4 949 aa14.31□□□□□ -0.12
SMAD3-202ENST00000439724 NUP98P52948 1817 aa14.31□□□□□ -0.12
SMAD3-202ENST00000439724 ZNF831Q5JPB2 1677 aa14.31□□□□□ -0.12
SMAD3-202ENST00000439724 ST18O60284 1047 aa14.31□□□□□ -0.12
SMAD3-202ENST00000439724 FRAT2O75474 233 aaPredicted RBP14.31□□□□□ -0.12
SMAD3-202ENST00000439724 IL6STP40189 918 aaPredicted RBP14.31□□□□□ -0.12
SMAD3-202ENST00000439724 TFCP2Q12800 502 aa14.31□□□□□ -0.12
SMAD3-202ENST00000439724 RUFY2Q8WXA3 655 aa14.31□□□□□ -0.12
SMAD3-202ENST00000439724 IL25Q9H293 177 aa14.31□□□□□ -0.12
SMAD3-202ENST00000439724 TLR7Q9NYK1 1049 aaKnown RBP14.31□□□□□ -0.12
SMAD3-202ENST00000439724 ZBTB1Q9Y2K1 713 aa14.31□□□□□ -0.12
SMAD3-202ENST00000439724 ZNF330Q9Y3S2 320 aaPredicted RBP14.31□□□□□ -0.12
SMAD3-202ENST00000439724 RAD50Q92878 1312 aa14.3□□□□□ -0.12
SMAD3-202ENST00000439724 HIP1O00291 1037 aa14.3□□□□□ -0.12
SMAD3-202ENST00000439724 GPR108Q9NPR9 543 aa14.3□□□□□ -0.12
SMAD3-202ENST00000439724 DIAPH3Q9NSV4 1193 aa14.3□□□□□ -0.12
SMAD3-202ENST00000439724 CDHR2Q9BYE9 1310 aa14.3□□□□□ -0.12
SMAD3-202ENST00000439724 BCL9LQ86UU0 1499 aa14.3□□□□□ -0.12
SMAD3-202ENST00000439724 ERVV-1B6SEH8 477 aa14.29□□□□□ -0.12
SMAD3-202ENST00000439724 CIAO1O76071 339 aa14.29□□□□□ -0.12
SMAD3-202ENST00000439724 HSPA4P34932 840 aa14.29□□□□□ -0.12
SMAD3-202ENST00000439724 VPS72Q15906 364 aa14.29□□□□□ -0.12
SMAD3-202ENST00000439724 ATG9AQ7Z3C6 839 aa14.29□□□□□ -0.12
SMAD3-202ENST00000439724 ZBTB38Q8NAP3 1195 aaPredicted RBP14.29□□□□□ -0.12
SMAD3-202ENST00000439724 LSG1Q9H089 658 aaKnown RBP14.29□□□□□ -0.12
SMAD3-202ENST00000439724 DBNLQ9UJU6 430 aaKnown RBP14.29□□□□□ -0.12
SMAD3-202ENST00000439724 CHMP3Q9Y3E7 222 aa14.29□□□□□ -0.12
SMAD3-202ENST00000439724 CCDC9Q9Y3X0 531 aaKnown RBP14.29□□□□□ -0.12
SMAD3-202ENST00000439724 MYH3P11055 1940 aa14.28□□□□□ -0.12
SMAD3-202ENST00000439724 RFX7Q2KHR2 1363 aa14.28□□□□□ -0.12
SMAD3-202ENST00000439724 ATP5JP18859 108 aa14.28□□□□□ -0.12
SMAD3-202ENST00000439724 IL15P40933 162 aaPredicted RBP14.28□□□□□ -0.12
SMAD3-202ENST00000439724 FBXO3Q9UK99 471 aa14.28□□□□□ -0.12
SMAD3-202ENST00000439724 EYA2O00167 538 aa14.27□□□□□ -0.12
SMAD3-202ENST00000439724 HSP90AA1P07900 732 aaKnown RBP14.27□□□□□ -0.12
SMAD3-202ENST00000439724 HLFQ16534 295 aa14.27□□□□□ -0.12
SMAD3-202ENST00000439724 CWC27Q6UX04 472 aaKnown RBP14.27□□□□□ -0.12
SMAD3-202ENST00000439724 KIAA1211Q6ZU35 1233 aa14.27□□□□□ -0.12
SMAD3-202ENST00000439724 NLRP10Q86W26 655 aa14.27□□□□□ -0.12
SMAD3-202ENST00000439724 SNRKQ9NRH2 765 aa14.27□□□□□ -0.12
SMAD3-202ENST00000439724 PALD1Q9ULE6 856 aa14.27□□□□□ -0.12
SMAD3-202ENST00000439724 COL5A3P25940 1745 aaPredicted RBP14.27□□□□□ -0.13
SMAD3-202ENST00000439724 ZNF609O15014 1411 aa14.27□□□□□ -0.13
SMAD3-202ENST00000439724 SPATA31A6Q5VVP1 1343 aa14.26□□□□□ -0.13
SMAD3-202ENST00000439724 CSF1RP07333 972 aa14.26□□□□□ -0.13
SMAD3-202ENST00000439724 MCM2P49736 904 aa14.26□□□□□ -0.13
SMAD3-202ENST00000439724 DZIP3Q86Y13 1208 aaKnown RBP14.26□□□□□ -0.13
SMAD3-202ENST00000439724 SMARCC1Q92922 1105 aaPredicted RBP14.26□□□□□ -0.13
SMAD3-202ENST00000439724 BOLA2Q9H3K6 86 aa14.26□□□□□ -0.13
SMAD3-202ENST00000439724 CCDC87Q9NVE4 849 aa14.26□□□□□ -0.13
SMAD3-202ENST00000439724 PALLDQ8WX93 1383 aa14.26□□□□□ -0.13
SMAD3-202ENST00000439724 THSD7AQ9UPZ6 1657 aa14.26□□□□□ -0.13
SMAD3-202ENST00000439724 LOC102724428A0A0B4J2F2 783 aa14.25□□□□□ -0.13
SMAD3-202ENST00000439724 EIF5P55010 431 aaKnown RBP14.25□□□□□ -0.13
SMAD3-202ENST00000439724 SIK1P57059 783 aa14.25□□□□□ -0.13
SMAD3-202ENST00000439724 INTS5Q6P9B9 1019 aaKnown RBP14.25□□□□□ -0.13
SMAD3-202ENST00000439724 FNBP4Q8N3X1 1017 aaPredicted RBP14.25□□□□□ -0.13
SMAD3-202ENST00000439724 ACSBG1Q96GR2 724 aa14.25□□□□□ -0.13
SMAD3-202ENST00000439724 DBNDD2Q9BQY9 259 aa14.25□□□□□ -0.13
SMAD3-202ENST00000439724 ATP6V1AP38606 617 aa14.25□□□□□ -0.13
SMAD3-202ENST00000439724 NEK4P51957 841 aa14.25□□□□□ -0.13
SMAD3-202ENST00000439724 CCDC57Q2TAC2 916 aa14.25□□□□□ -0.13
SMAD3-202ENST00000439724 FAM89AQ96GI7 184 aa14.25□□□□□ -0.13
SMAD3-202ENST00000439724 NGLY1Q96IV0 654 aa14.25□□□□□ -0.13
SMAD3-202ENST00000439724 C8orf37Q96NL8 207 aa14.25□□□□□ -0.13
SMAD3-202ENST00000439724 SPEF2Q9C093 1822 aa14.25□□□□□ -0.13
SMAD3-202ENST00000439724 MYH14Q7Z406 1995 aaKnown RBP14.24□□□□□ -0.13
SMAD3-202ENST00000439724 CRKLP46109 303 aaKnown RBP14.24□□□□□ -0.13
SMAD3-202ENST00000439724 RAB3GAP1Q15042 981 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms