RNA–Protein interactions for RNA: ENST00000439176.5

ERCC8-203, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-203ENST00000439176 TTLL6Q8N841 843 aa9.04□□□□□ -0.96
ERCC8-203ENST00000439176 RSPH6AQ9H0K4 717 aa9.04□□□□□ -0.96
ERCC8-203ENST00000439176 RNF181Q9P0P0 153 aa9.04□□□□□ -0.96
ERCC8-203ENST00000439176 KCPQ6ZWJ8 1503 aa9.04□□□□□ -0.96
ERCC8-203ENST00000439176 COL3A1P02461 1466 aaPredicted RBP9.03□□□□□ -0.96
ERCC8-203ENST00000439176 HTATSF1O43719 755 aaKnown RBP9.03□□□□□ -0.96
ERCC8-203ENST00000439176 PPP2R1AP30153 589 aa9.03□□□□□ -0.96
ERCC8-203ENST00000439176 APLP1P51693 650 aa9.03□□□□□ -0.96
ERCC8-203ENST00000439176 TMEM92Q6UXU6 159 aa9.03□□□□□ -0.96
ERCC8-203ENST00000439176 SETDB2Q96T68 719 aa9.03□□□□□ -0.96
ERCC8-203ENST00000439176 ADAMTS7Q9UKP4 1686 aa9.03□□□□□ -0.96
ERCC8-203ENST00000439176 ZC3H4Q9UPT8 1303 aaKnown RBP9.03□□□□□ -0.96
ERCC8-203ENST00000439176 KIAA1551Q9HCM1 1747 aa9.02□□□□□ -0.96
ERCC8-203ENST00000439176 CEMIPQ8WUJ3 1361 aa9.02□□□□□ -0.97
ERCC8-203ENST00000439176 RIMBP2O15034 1052 aa9.02□□□□□ -0.97
ERCC8-203ENST00000439176 SNRPA1P09661 255 aaKnown RBP9.02□□□□□ -0.97
ERCC8-203ENST00000439176 LMNB1P20700 586 aa9.02□□□□□ -0.97
ERCC8-203ENST00000439176 ST5P78524 1137 aa9.02□□□□□ -0.97
ERCC8-203ENST00000439176 ZNF687Q8N1G0 1237 aa9.02□□□□□ -0.97
ERCC8-203ENST00000439176 ZNF622Q969S3 477 aaKnown RBP eCLIP9.02□□□□□ -0.97
ERCC8-203ENST00000439176 PHACTR3Q96KR7 559 aa9.02□□□□□ -0.97
ERCC8-203ENST00000439176 BRIP1Q9BX63 1249 aa9.02□□□□□ -0.97
ERCC8-203ENST00000439176 PNNQ9H307 717 aaKnown RBP9.02□□□□□ -0.97
ERCC8-203ENST00000439176 BCL2L12Q9HB09 334 aa9.02□□□□□ -0.97
ERCC8-203ENST00000439176 TBC1D2BQ9UPU7 963 aa9.02□□□□□ -0.97
ERCC8-203ENST00000439176 ZNF652Q9Y2D9 606 aa9.02□□□□□ -0.97
ERCC8-203ENST00000439176 VIRMAQ69YN4 1812 aaKnown RBP9.02□□□□□ -0.97
ERCC8-203ENST00000439176 ARFGEF1Q9Y6D6 1849 aa9.02□□□□□ -0.97
ERCC8-203ENST00000439176 CARMIL3Q8ND23 1372 aa9.01□□□□□ -0.97
ERCC8-203ENST00000439176 A1BGP04217 495 aa9.01□□□□□ -0.97
ERCC8-203ENST00000439176 BRCA1P38398 1863 aaKnown RBP9.01□□□□□ -0.97
ERCC8-203ENST00000439176 TBC1D9BQ66K14 1250 aa9.01□□□□□ -0.97
ERCC8-203ENST00000439176 DZIP3Q86Y13 1208 aaKnown RBP9.01□□□□□ -0.97
ERCC8-203ENST00000439176 CNBD1Q8NA66 436 aa9.01□□□□□ -0.97
ERCC8-203ENST00000439176 RBM46Q8TBY0 533 aaKnown RBP9.01□□□□□ -0.97
ERCC8-203ENST00000439176 NMRK2Q9NPI5 230 aa9.01□□□□□ -0.97
ERCC8-203ENST00000439176 UBR2Q8IWV8 1755 aa9□□□□□ -0.97
ERCC8-203ENST00000439176 FSTL1Q12841 308 aa9□□□□□ -0.97
ERCC8-203ENST00000439176 TAF7Q15545 349 aaPredicted RBP9□□□□□ -0.97
ERCC8-203ENST00000439176 SOGA3Q5TF21 947 aa9□□□□□ -0.97
ERCC8-203ENST00000439176 CLEC4GQ6UXB4 293 aa9□□□□□ -0.97
ERCC8-203ENST00000439176 MCM10Q7L590 875 aa9□□□□□ -0.97
ERCC8-203ENST00000439176 PNISRQ8TF01 805 aaKnown RBP9□□□□□ -0.97
ERCC8-203ENST00000439176 CNKSR1Q969H4 720 aa9□□□□□ -0.97
ERCC8-203ENST00000439176 KCNQ3O43525 872 aa8.99□□□□□ -0.97
ERCC8-203ENST00000439176 PRR5LQ6MZQ0 368 aa8.99□□□□□ -0.97
ERCC8-203ENST00000439176 NBPF5PQ86XG9 351 aaPredicted RBP8.99□□□□□ -0.97
ERCC8-203ENST00000439176 RRAGCQ9HB90 399 aa8.99□□□□□ -0.97
ERCC8-203ENST00000439176 USP16Q9Y5T5 823 aa8.99□□□□□ -0.97
ERCC8-203ENST00000439176 GLTPD2A6NH11 291 aa8.98□□□□□ -0.97
ERCC8-203ENST00000439176 CAMTA2O94983 1202 aa8.98□□□□□ -0.97
ERCC8-203ENST00000439176 VEGFAP15692 232 aaPredicted RBP8.98□□□□□ -0.97
ERCC8-203ENST00000439176 RASSF7Q02833 373 aa8.98□□□□□ -0.97
ERCC8-203ENST00000439176 TPTE2Q6XPS3 522 aa8.98□□□□□ -0.97
ERCC8-203ENST00000439176 SMC1BQ8NDV3 1235 aa8.98□□□□□ -0.97
ERCC8-203ENST00000439176 MASTLQ96GX5 879 aa8.98□□□□□ -0.97
ERCC8-203ENST00000439176 MAPK8IP3Q9UPT6 1336 aa8.98□□□□□ -0.97
ERCC8-203ENST00000439176 AFDNP55196 1824 aaKnown RBP8.98□□□□□ -0.97
ERCC8-203ENST00000439176 CEP350Q5VT06 3117 aa8.98□□□□□ -0.97
ERCC8-203ENST00000439176 NRXN2Q9P2S2 1712 aa8.97□□□□□ -0.97
ERCC8-203ENST00000439176 C21orf2O43822 256 aa8.97□□□□□ -0.97
ERCC8-203ENST00000439176 GTF2E1P29083 439 aaPredicted RBP8.97□□□□□ -0.97
ERCC8-203ENST00000439176 DCTN1Q14203 1278 aa8.97□□□□□ -0.97
ERCC8-203ENST00000439176 ERFEQ4G0M1 354 aa8.97□□□□□ -0.97
ERCC8-203ENST00000439176 STYK1Q6J9G0 422 aa8.97□□□□□ -0.97
ERCC8-203ENST00000439176 ANKRD13DQ6ZTN6 518 aa8.97□□□□□ -0.97
ERCC8-203ENST00000439176 TAOK3Q9H2K8 898 aa8.97□□□□□ -0.97
ERCC8-203ENST00000439176 SIPA1L3O60292 1781 aaPredicted RBP8.96□□□□□ -0.97
ERCC8-203ENST00000439176 CCDC24Q8N4L8 307 aa8.96□□□□□ -0.98
ERCC8-203ENST00000439176 PLA2G2EQ9NZK7 142 aa8.96□□□□□ -0.98
ERCC8-203ENST00000439176 NIP7Q9Y221 180 aaKnown RBP eCLIP8.96□□□□□ -0.98
ERCC8-203ENST00000439176 PRAMEF22A3QJZ6 481 aa8.95□□□□□ -0.98
ERCC8-203ENST00000439176 NFKBIEO00221 500 aa8.95□□□□□ -0.98
ERCC8-203ENST00000439176 SRGNP10124 158 aa8.95□□□□□ -0.98
ERCC8-203ENST00000439176 NPR1P16066 1061 aa8.95□□□□□ -0.98
ERCC8-203ENST00000439176 PIP4K2AP48426 406 aaPredicted RBP8.95□□□□□ -0.98
ERCC8-203ENST00000439176 IFFO2Q5TF58 517 aa8.95□□□□□ -0.98
ERCC8-203ENST00000439176 PRPF40BQ6NWY9 871 aaKnown RBP8.95□□□□□ -0.98
ERCC8-203ENST00000439176 KIF6Q6ZMV9 814 aa8.95□□□□□ -0.98
ERCC8-203ENST00000439176 SPRYD3Q8NCJ5 442 aa8.95□□□□□ -0.98
ERCC8-203ENST00000439176 NYXQ9GZU5 481 aa8.95□□□□□ -0.98
ERCC8-203ENST00000439176 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.95□□□□□ -0.98
ERCC8-203ENST00000439176 SBF1O95248 1867 aa8.95□□□□□ -0.98
ERCC8-203ENST00000439176 SCN7AQ01118 1682 aa8.94□□□□□ -0.98
ERCC8-203ENST00000439176 DLEC1Q9Y238 1755 aa8.94□□□□□ -0.98
ERCC8-203ENST00000439176 ALDH1B1P30837 517 aa8.94□□□□□ -0.98
ERCC8-203ENST00000439176 RALBP1Q15311 655 aa8.94□□□□□ -0.98
ERCC8-203ENST00000439176 NFE2L2Q16236 605 aa8.94□□□□□ -0.98
ERCC8-203ENST00000439176 MIS18AQ9NYP9 233 aa8.94□□□□□ -0.98
ERCC8-203ENST00000439176 LTBP3Q9NS15 1303 aa8.94□□□□□ -0.98
ERCC8-203ENST00000439176 TNRC6CQ9HCJ0 1690 aaKnown RBP8.94□□□□□ -0.98
ERCC8-203ENST00000439176 FAM177BA6PVY3 158 aa8.93□□□□□ -0.98
ERCC8-203ENST00000439176 NBPF26B4DH59 902 aa8.93□□□□□ -0.98
ERCC8-203ENST00000439176 ERVV-1B6SEH8 477 aa8.93□□□□□ -0.98
ERCC8-203ENST00000439176 LMOD3Q0VAK6 560 aa8.93□□□□□ -0.98
ERCC8-203ENST00000439176 CCDC93Q567U6 631 aa8.93□□□□□ -0.98
ERCC8-203ENST00000439176 NBPF10Q6P3W6 841 aaKnown RBP8.93□□□□□ -0.98
ERCC8-203ENST00000439176 RTKN2Q8IZC4 609 aa8.93□□□□□ -0.98
ERCC8-203ENST00000439176 NGEFQ8N5V2 710 aa8.93□□□□□ -0.98
ERCC8-203ENST00000439176 NBPF15Q8N660 670 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms