RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 PSMA6P60900 246 aaKnown RBP5.84□□□□□ -1.47
HMGB1P12-201ENST00000438594 ZNF280CQ8ND82 737 aa5.84□□□□□ -1.47
HMGB1P12-201ENST00000438594 TPCN2Q8NHX9 752 aa5.84□□□□□ -1.47
HMGB1P12-201ENST00000438594 LENG1Q96BZ8 264 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P12-201ENST00000438594 PNMA5Q96PV4 448 aa5.84□□□□□ -1.47
HMGB1P12-201ENST00000438594 SLC6A14Q9UN76 642 aa5.84□□□□□ -1.47
HMGB1P12-201ENST00000438594 LZTS3O60299 673 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P12-201ENST00000438594 EPHA4P54764 986 aa5.83□□□□□ -1.48
HMGB1P12-201ENST00000438594 TYRO3Q06418 890 aa5.83□□□□□ -1.48
HMGB1P12-201ENST00000438594 PSAPL1Q6NUJ1 521 aa5.83□□□□□ -1.48
HMGB1P12-201ENST00000438594 C7orf43Q8WVR3 580 aa5.83□□□□□ -1.48
HMGB1P12-201ENST00000438594 SUSD3Q96L08 255 aa5.83□□□□□ -1.48
HMGB1P12-201ENST00000438594 KRTAP4-12Q9BQ66 201 aa5.83□□□□□ -1.48
HMGB1P12-201ENST00000438594 TSPAN10Q9H1Z9 355 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P12-201ENST00000438594 USP17L5A8MUK1 530 aa5.82□□□□□ -1.48
HMGB1P12-201ENST00000438594 RGS9O75916 674 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P12-201ENST00000438594 C1orf53Q5VUE5 145 aa5.82□□□□□ -1.48
HMGB1P12-201ENST00000438594 CCDC102BQ68D86 513 aa5.82□□□□□ -1.48
HMGB1P12-201ENST00000438594 TRIM50Q86XT4 487 aa5.82□□□□□ -1.48
HMGB1P12-201ENST00000438594 NGLY1Q96IV0 654 aa5.82□□□□□ -1.48
HMGB1P12-201ENST00000438594 ZMYND15Q9H091 742 aa5.82□□□□□ -1.48
HMGB1P12-201ENST00000438594 ZBTB7CA1YPR0 619 aa5.81□□□□□ -1.48
HMGB1P12-201ENST00000438594 BTBD11A6QL63 1104 aa5.81□□□□□ -1.48
HMGB1P12-201ENST00000438594 PPP1R12BO60237 982 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P12-201ENST00000438594 FMR1NBQ8N0W7 255 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P12-201ENST00000438594 DNAJB12Q9NXW2 375 aaKnown RBP5.81□□□□□ -1.48
HMGB1P12-201ENST00000438594 RBM19Q9Y4C8 960 aaKnown RBP5.81□□□□□ -1.48
HMGB1P12-201ENST00000438594 IGSF3O75054 1194 aa5.8□□□□□ -1.48
HMGB1P12-201ENST00000438594 IREB2P48200 963 aaKnown RBP5.8□□□□□ -1.48
HMGB1P12-201ENST00000438594 AFF1P51825 1210 aaKnown RBP5.8□□□□□ -1.48
HMGB1P12-201ENST00000438594 KCNQ4P56696 695 aa5.8□□□□□ -1.48
HMGB1P12-201ENST00000438594 WWC1Q8IX03 1113 aa5.8□□□□□ -1.48
HMGB1P12-201ENST00000438594 ARID3AQ99856 593 aa5.8□□□□□ -1.48
HMGB1P12-201ENST00000438594 SHROOM4Q9ULL8 1493 aa5.79□□□□□ -1.48
HMGB1P12-201ENST00000438594 CPB1P15086 417 aa5.79□□□□□ -1.48
HMGB1P12-201ENST00000438594 NFKB1P19838 968 aa5.79□□□□□ -1.48
HMGB1P12-201ENST00000438594 ATP1A2P50993 1020 aa5.79□□□□□ -1.48
HMGB1P12-201ENST00000438594 BTLAQ7Z6A9 289 aa5.79□□□□□ -1.48
HMGB1P12-201ENST00000438594 FAM35AQ86V20 835 aa5.79□□□□□ -1.48
HMGB1P12-201ENST00000438594 NFATC2IPQ8NCF5 419 aa5.79□□□□□ -1.48
HMGB1P12-201ENST00000438594 CHMP7Q8WUX9 453 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P12-201ENST00000438594 WFDC12Q8WWY7 111 aa5.79□□□□□ -1.48
HMGB1P12-201ENST00000438594 C1orf115Q9H7X2 142 aa5.79□□□□□ -1.48
HMGB1P12-201ENST00000438594 KIAA1024Q9UPX6 916 aa5.79□□□□□ -1.48
HMGB1P12-201ENST00000438594 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P12-201ENST00000438594 ALDH16A1Q8IZ83 802 aa5.78□□□□□ -1.48
HMGB1P12-201ENST00000438594 TSEN2Q8NCE0 465 aaKnown RBP5.78□□□□□ -1.48
HMGB1P12-201ENST00000438594 PCMTD2Q9NV79 361 aa5.78□□□□□ -1.48
HMGB1P12-201ENST00000438594 NAGPAQ9UK23 515 aa5.78□□□□□ -1.48
HMGB1P12-201ENST00000438594 MCM6Q14566 821 aa5.77□□□□□ -1.49
HMGB1P12-201ENST00000438594 HIF1AQ16665 826 aa5.77□□□□□ -1.49
HMGB1P12-201ENST00000438594 MSL1Q68DK7 614 aa5.77□□□□□ -1.49
HMGB1P12-201ENST00000438594 KRT25Q7Z3Z0 450 aa5.77□□□□□ -1.49
HMGB1P12-201ENST00000438594 ZNF594Q96JF6 807 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P12-201ENST00000438594 SSBP4Q9BWG4 385 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P12-201ENST00000438594 ALG2Q9H553 416 aa5.77□□□□□ -1.49
HMGB1P12-201ENST00000438594 GOLGA2P5Q9HBQ8 144 aa5.77□□□□□ -1.49
HMGB1P12-201ENST00000438594 COG6Q9Y2V7 657 aa5.77□□□□□ -1.49
HMGB1P12-201ENST00000438594 USP17L3A6NCW0 530 aa5.76□□□□□ -1.49
HMGB1P12-201ENST00000438594 USP17L4A6NCW7 530 aa5.76□□□□□ -1.49
HMGB1P12-201ENST00000438594 ZBTB7BO15156 539 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P12-201ENST00000438594 NOS3P29474 1203 aa5.76□□□□□ -1.49
HMGB1P12-201ENST00000438594 HIRAP54198 1017 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P12-201ENST00000438594 CLDN10P78369 228 aa5.76□□□□□ -1.49
HMGB1P12-201ENST00000438594 CCINQ13939 588 aa5.76□□□□□ -1.49
HMGB1P12-201ENST00000438594 USP17L2Q6R6M4 530 aa5.76□□□□□ -1.49
HMGB1P12-201ENST00000438594 USP17L1Q7RTZ2 530 aa5.76□□□□□ -1.49
HMGB1P12-201ENST00000438594 WFDC8Q8IUA0 241 aa5.76□□□□□ -1.49
HMGB1P12-201ENST00000438594 OGFOD1Q8N543 542 aa5.76□□□□□ -1.49
HMGB1P12-201ENST00000438594 GSX2Q9BZM3 304 aa5.76□□□□□ -1.49
HMGB1P12-201ENST00000438594 RNF112Q9ULX5 631 aa5.76□□□□□ -1.49
HMGB1P12-201ENST00000438594 SSTR4P31391 388 aa5.75□□□□□ -1.49
HMGB1P12-201ENST00000438594 MLLT1Q03111 559 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P12-201ENST00000438594 MCTP1Q6DN14 999 aa5.75□□□□□ -1.49
HMGB1P12-201ENST00000438594 ELMSAN1Q6PJG2 1045 aa5.75□□□□□ -1.49
HMGB1P12-201ENST00000438594 FBXO11Q86XK2 927 aa5.75□□□□□ -1.49
HMGB1P12-201ENST00000438594 SCG3Q8WXD2 468 aaKnown RBP5.75□□□□□ -1.49
HMGB1P12-201ENST00000438594 PALM3A6NDB9 673 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P12-201ENST00000438594 PDIA4P13667 645 aaKnown RBP5.74□□□□□ -1.49
HMGB1P12-201ENST00000438594 MEGF10Q96KG7 1140 aa5.74□□□□□ -1.49
HMGB1P12-201ENST00000438594 EFCC1Q9HA90 598 aa5.74□□□□□ -1.49
HMGB1P12-201ENST00000438594 MKRN1Q9UHC7 482 aaKnown RBP5.74□□□□□ -1.49
HMGB1P12-201ENST00000438594 ATAD2Q6PL18 1390 aa5.74□□□□□ -1.49
HMGB1P12-201ENST00000438594 PAX4O43316 350 aa5.73□□□□□ -1.49
HMGB1P12-201ENST00000438594 EPB42P16452 691 aa5.73□□□□□ -1.49
HMGB1P12-201ENST00000438594 CDK11BP21127 795 aaKnown RBP5.73□□□□□ -1.49
HMGB1P12-201ENST00000438594 PCSK7Q16549 785 aa5.73□□□□□ -1.49
HMGB1P12-201ENST00000438594 PRR23CQ6ZRP0 262 aa5.73□□□□□ -1.49
HMGB1P12-201ENST00000438594 LARGE2Q8N3Y3 721 aa5.73□□□□□ -1.49
HMGB1P12-201ENST00000438594 DTWD1Q8N5C7 304 aa5.73□□□□□ -1.49
HMGB1P12-201ENST00000438594 LPIN3Q9BQK8 851 aa5.73□□□□□ -1.49
HMGB1P12-201ENST00000438594 CDK11AQ9UQ88 783 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P12-201ENST00000438594 M0R2N6 131 aa5.72□□□□□ -1.49
HMGB1P12-201ENST00000438594 C21orf2O43822 256 aa5.72□□□□□ -1.49
HMGB1P12-201ENST00000438594 RAD21O60216 631 aa5.72□□□□□ -1.49
HMGB1P12-201ENST00000438594 LGR5O75473 907 aa5.72□□□□□ -1.49
HMGB1P12-201ENST00000438594 RASA1P20936 1047 aa5.72□□□□□ -1.49
HMGB1P12-201ENST00000438594 PLAURQ03405 335 aa5.72□□□□□ -1.49
HMGB1P12-201ENST00000438594 PERM1Q5SV97 790 aa5.72□□□□□ -1.49
HMGB1P12-201ENST00000438594 IGF2-ASQ6U949 168 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms