RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 JDP2Q8WYK2 163 aa16.93■□□□□ 0.3
SMAD9-IT1-201ENST00000437983 GLIS2Q9BZE0 524 aaPredicted RBP16.93■□□□□ 0.3
SMAD9-IT1-201ENST00000437983 MRC1P22897 1456 aa16.93■□□□□ 0.3
SMAD9-IT1-201ENST00000437983 HHIPL1Q96JK4 782 aa16.92■□□□□ 0.3
SMAD9-IT1-201ENST00000437983 SNED1Q8TER0 1413 aa16.91■□□□□ 0.3
SMAD9-IT1-201ENST00000437983 MIER1Q8N108 512 aa16.91■□□□□ 0.3
SMAD9-IT1-201ENST00000437983 ZNF408Q9H9D4 720 aa16.91■□□□□ 0.3
SMAD9-IT1-201ENST00000437983 KLRG2A4D1S0 409 aaPredicted RBP16.9■□□□□ 0.3
SMAD9-IT1-201ENST00000437983 A1BGP04217 495 aa16.9■□□□□ 0.3
SMAD9-IT1-201ENST00000437983 HABP4Q5JVS0 413 aaKnown RBP16.9■□□□□ 0.3
SMAD9-IT1-201ENST00000437983 SLC51AQ86UW1 340 aa16.9■□□□□ 0.3
SMAD9-IT1-201ENST00000437983 IL6STP40189 918 aaPredicted RBP16.89■□□□□ 0.29
SMAD9-IT1-201ENST00000437983 CDCA8Q53HL2 280 aa16.89■□□□□ 0.29
SMAD9-IT1-201ENST00000437983 NBPF5PQ86XG9 351 aaPredicted RBP16.89■□□□□ 0.29
SMAD9-IT1-201ENST00000437983 BCORQ6W2J9 1755 aa16.89■□□□□ 0.29
SMAD9-IT1-201ENST00000437983 UBR2Q8IWV8 1755 aa16.89■□□□□ 0.29
SMAD9-IT1-201ENST00000437983 NOGQ13253 232 aa16.88■□□□□ 0.29
SMAD9-IT1-201ENST00000437983 ZNF496Q96IT1 587 aaPredicted RBP16.88■□□□□ 0.29
SMAD9-IT1-201ENST00000437983 PSMD1Q99460 953 aa16.88■□□□□ 0.29
SMAD9-IT1-201ENST00000437983 DLK2Q6UY11 383 aa16.87■□□□□ 0.29
SMAD9-IT1-201ENST00000437983 TRPA1O75762 1119 aa16.86■□□□□ 0.29
SMAD9-IT1-201ENST00000437983 PIP4K2AP48426 406 aaPredicted RBP16.86■□□□□ 0.29
SMAD9-IT1-201ENST00000437983 DZIP3Q86Y13 1208 aaKnown RBP16.86■□□□□ 0.29
SMAD9-IT1-201ENST00000437983 NBPF15Q8N660 670 aa16.86■□□□□ 0.29
SMAD9-IT1-201ENST00000437983 BBXQ8WY36 941 aaPredicted RBP16.86■□□□□ 0.29
SMAD9-IT1-201ENST00000437983 GCC1Q96CN9 775 aa16.86■□□□□ 0.29
SMAD9-IT1-201ENST00000437983 ADARB2Q9NS39 739 aaKnown RBP16.86■□□□□ 0.29
SMAD9-IT1-201ENST00000437983 RNF186Q9NXI6 227 aa16.86■□□□□ 0.29
SMAD9-IT1-201ENST00000437983 GPRC5DQ9NZD1 345 aa16.86■□□□□ 0.29
SMAD9-IT1-201ENST00000437983 HPS5Q9UPZ3 1129 aa16.86■□□□□ 0.29
SMAD9-IT1-201ENST00000437983 FAM177BA6PVY3 158 aa16.85■□□□□ 0.29
SMAD9-IT1-201ENST00000437983 FAM155AB1AL88 458 aaPredicted RBP16.85■□□□□ 0.29
SMAD9-IT1-201ENST00000437983 IL13P35225 146 aa16.85■□□□□ 0.29
SMAD9-IT1-201ENST00000437983 TTC5Q8N0Z6 440 aa16.85■□□□□ 0.29
SMAD9-IT1-201ENST00000437983 LARGE2Q8N3Y3 721 aa16.85■□□□□ 0.29
SMAD9-IT1-201ENST00000437983 ALDH1B1P30837 517 aa16.84■□□□□ 0.29
SMAD9-IT1-201ENST00000437983 HIRAP54198 1017 aaPredicted RBP16.84■□□□□ 0.29
SMAD9-IT1-201ENST00000437983 HUNKP57058 714 aa16.84■□□□□ 0.29
SMAD9-IT1-201ENST00000437983 KIF23Q02241 960 aaPredicted RBP16.84■□□□□ 0.29
SMAD9-IT1-201ENST00000437983 CTU1Q7Z7A3 348 aaKnown RBP16.84■□□□□ 0.29
SMAD9-IT1-201ENST00000437983 SAGE1Q9NXZ1 904 aa16.84■□□□□ 0.29
SMAD9-IT1-201ENST00000437983 HEG1Q9ULI3 1381 aa16.84■□□□□ 0.29
SMAD9-IT1-201ENST00000437983 MTHFSDQ2M296 383 aaKnown RBP16.83■□□□□ 0.28
SMAD9-IT1-201ENST00000437983 PGAP2Q9UHJ9 254 aa16.83■□□□□ 0.28
SMAD9-IT1-201ENST00000437983 RGL2O15211 777 aa16.82■□□□□ 0.28
SMAD9-IT1-201ENST00000437983 TPTE2Q6XPS3 522 aa16.81■□□□□ 0.28
SMAD9-IT1-201ENST00000437983 NPM2Q86SE8 214 aaKnown RBP16.81■□□□□ 0.28
SMAD9-IT1-201ENST00000437983 TEX13AQ9BXU3 409 aaPredicted RBP16.81■□□□□ 0.28
SMAD9-IT1-201ENST00000437983 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.81■□□□□ 0.28
SMAD9-IT1-201ENST00000437983 HMOX1P09601 288 aa16.8■□□□□ 0.28
SMAD9-IT1-201ENST00000437983 GMPSP49915 693 aaPredicted RBP16.8■□□□□ 0.28
SMAD9-IT1-201ENST00000437983 RGMBQ6NW40 437 aa16.8■□□□□ 0.28
SMAD9-IT1-201ENST00000437983 ZNF790Q6PG37 636 aa16.8■□□□□ 0.28
SMAD9-IT1-201ENST00000437983 USP48Q86UV5 1035 aa16.8■□□□□ 0.28
SMAD9-IT1-201ENST00000437983 NIM1KQ8IY84 436 aa16.8■□□□□ 0.28
SMAD9-IT1-201ENST00000437983 TRPM4Q8TD43 1214 aa16.8■□□□□ 0.28
SMAD9-IT1-201ENST00000437983 NIP7Q9Y221 180 aaKnown RBP eCLIP16.8■□□□□ 0.28
SMAD9-IT1-201ENST00000437983 SHTN1A0MZ66 631 aa16.79■□□□□ 0.28
SMAD9-IT1-201ENST00000437983 TCERG1O14776 1098 aaKnown RBP16.79■□□□□ 0.28
SMAD9-IT1-201ENST00000437983 FXR1P51114 621 aaKnown RBP eCLIP16.79■□□□□ 0.28
SMAD9-IT1-201ENST00000437983 CXCL9Q07325 125 aa16.79■□□□□ 0.28
SMAD9-IT1-201ENST00000437983 CLEC4GQ6UXB4 293 aa16.79■□□□□ 0.28
SMAD9-IT1-201ENST00000437983 CDC37L1Q7L3B6 337 aa16.79■□□□□ 0.28
SMAD9-IT1-201ENST00000437983 NPC1L1Q9UHC9 1359 aa16.78■□□□□ 0.28
SMAD9-IT1-201ENST00000437983 KCNQ3O43525 872 aa16.78■□□□□ 0.28
SMAD9-IT1-201ENST00000437983 AOC3Q16853 763 aa16.78■□□□□ 0.28
SMAD9-IT1-201ENST00000437983 USP16Q9Y5T5 823 aa16.78■□□□□ 0.28
SMAD9-IT1-201ENST00000437983 CRY2Q49AN0 593 aa16.77■□□□□ 0.28
SMAD9-IT1-201ENST00000437983 CC2D2BQ6DHV5 1058 aa16.77■□□□□ 0.28
SMAD9-IT1-201ENST00000437983 CSRNP1Q96S65 589 aa16.77■□□□□ 0.28
SMAD9-IT1-201ENST00000437983 POLR3GLQ9BT43 218 aa16.77■□□□□ 0.28
SMAD9-IT1-201ENST00000437983 PRAMEF22A3QJZ6 481 aa16.76■□□□□ 0.27
SMAD9-IT1-201ENST00000437983 PPIP5K2O43314 1243 aa16.76■□□□□ 0.27
SMAD9-IT1-201ENST00000437983 ZC3H15Q8WU90 426 aaKnown RBP16.76■□□□□ 0.27
SMAD9-IT1-201ENST00000437983 ABCC12Q96J65 1359 aa16.76■□□□□ 0.27
SMAD9-IT1-201ENST00000437983 ZNF157P51786 506 aaPredicted RBP16.75■□□□□ 0.27
SMAD9-IT1-201ENST00000437983 NUTM1Q86Y26 1132 aa16.75■□□□□ 0.27
SMAD9-IT1-201ENST00000437983 IL17REQ8NFR9 667 aa16.75■□□□□ 0.27
SMAD9-IT1-201ENST00000437983 FMNL2Q96PY5 1086 aa16.75■□□□□ 0.27
SMAD9-IT1-201ENST00000437983 ZNF652Q9Y2D9 606 aa16.75■□□□□ 0.27
SMAD9-IT1-201ENST00000437983 MKI67P46013 3256 aaKnown RBP16.75■□□□□ 0.27
SMAD9-IT1-201ENST00000437983 GTF2E1P29083 439 aaPredicted RBP16.74■□□□□ 0.27
SMAD9-IT1-201ENST00000437983 HLFQ16534 295 aa16.74■□□□□ 0.27
SMAD9-IT1-201ENST00000437983 CCDC102AQ96A19 550 aa16.74■□□□□ 0.27
SMAD9-IT1-201ENST00000437983 GBA2Q9HCG7 927 aaPredicted RBP16.74■□□□□ 0.27
SMAD9-IT1-201ENST00000437983 AKAP11Q9UKA4 1901 aa16.73■□□□□ 0.27
SMAD9-IT1-201ENST00000437983 MORC1Q86VD1 984 aa16.73■□□□□ 0.27
SMAD9-IT1-201ENST00000437983 ZNRF3Q9ULT6 936 aa16.73■□□□□ 0.27
SMAD9-IT1-201ENST00000437983 RAD17O75943 681 aa16.72■□□□□ 0.27
SMAD9-IT1-201ENST00000437983 TEFQ10587 303 aa16.72■□□□□ 0.27
SMAD9-IT1-201ENST00000437983 BCL2L13Q9BXK5 485 aa16.72■□□□□ 0.27
SMAD9-IT1-201ENST00000437983 ZBTB47Q9UFB7 747 aaPredicted RBP16.72■□□□□ 0.27
SMAD9-IT1-201ENST00000437983 PPEF1O14829 653 aaPredicted RBP16.71■□□□□ 0.27
SMAD9-IT1-201ENST00000437983 SLC10A3P09131 477 aa16.71■□□□□ 0.27
SMAD9-IT1-201ENST00000437983 HOXA10P31260 410 aaPredicted RBP16.71■□□□□ 0.27
SMAD9-IT1-201ENST00000437983 PKN2Q16513 984 aaKnown RBP16.71■□□□□ 0.27
SMAD9-IT1-201ENST00000437983 C2orf69Q8N8R5 385 aa16.71■□□□□ 0.27
SMAD9-IT1-201ENST00000437983 ZNF296Q8WUU4 475 aaPredicted RBP16.71■□□□□ 0.27
SMAD9-IT1-201ENST00000437983 CNOT7Q9UIV1 285 aaKnown RBP16.71■□□□□ 0.27
SMAD9-IT1-201ENST00000437983 HDAC9Q9UKV0 1011 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms