RNA–Protein interactions for RNA: ENST00000437811.1

HLA-DPA1-243, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-243ENST00000437811 RAB11FIP3O75154 756 aa16.83■□□□□ 0.28
HLA-DPA1-243ENST00000437811 KCNQ4P56696 695 aa16.83■□□□□ 0.28
HLA-DPA1-243ENST00000437811 FAM161AQ3B820 660 aa16.83■□□□□ 0.28
HLA-DPA1-243ENST00000437811 BACH2Q9BYV9 841 aa16.83■□□□□ 0.28
HLA-DPA1-243ENST00000437811 FOXD4L1Q9NU39 408 aa16.83■□□□□ 0.28
HLA-DPA1-243ENST00000437811 RGS17Q9UGC6 210 aaPredicted RBP16.83■□□□□ 0.28
HLA-DPA1-243ENST00000437811 NOP58Q9Y2X3 529 aaKnown RBP16.83■□□□□ 0.28
HLA-DPA1-243ENST00000437811 APBB1O00213 710 aa16.82■□□□□ 0.28
HLA-DPA1-243ENST00000437811 SMARCA5O60264 1052 aaPredicted RBP16.82■□□□□ 0.28
HLA-DPA1-243ENST00000437811 SURF6O75683 361 aaKnown RBP16.82■□□□□ 0.28
HLA-DPA1-243ENST00000437811 CAMTA2O94983 1202 aa16.82■□□□□ 0.28
HLA-DPA1-243ENST00000437811 PCCAP05165 728 aaPredicted RBP16.82■□□□□ 0.28
HLA-DPA1-243ENST00000437811 HSP90AB4PQ58FF6 505 aa16.82■□□□□ 0.28
HLA-DPA1-243ENST00000437811 NLRP10Q86W26 655 aa16.82■□□□□ 0.28
HLA-DPA1-243ENST00000437811 LRRCC1Q9C099 1032 aa16.82■□□□□ 0.28
HLA-DPA1-243ENST00000437811 C8orf34Q49A92 452 aa16.81■□□□□ 0.28
HLA-DPA1-243ENST00000437811 ZNF34Q8IZ26 560 aa16.81■□□□□ 0.28
HLA-DPA1-243ENST00000437811 RPS6KA4O75676 772 aa16.8■□□□□ 0.28
HLA-DPA1-243ENST00000437811 TRIM37O94972 964 aa16.8■□□□□ 0.28
HLA-DPA1-243ENST00000437811 GPTP24298 496 aa16.8■□□□□ 0.28
HLA-DPA1-243ENST00000437811 FOXO4P98177 505 aa16.8■□□□□ 0.28
HLA-DPA1-243ENST00000437811 RNF39Q9H2S5 420 aa16.8■□□□□ 0.28
HLA-DPA1-243ENST00000437811 CDHR2Q9BYE9 1310 aa16.8■□□□□ 0.28
HLA-DPA1-243ENST00000437811 ZBTB22O15209 634 aa16.79■□□□□ 0.28
HLA-DPA1-243ENST00000437811 RGL2O15211 777 aa16.79■□□□□ 0.28
HLA-DPA1-243ENST00000437811 POTEAQ6S8J7 498 aa16.79■□□□□ 0.28
HLA-DPA1-243ENST00000437811 PLEKHM2Q8IWE5 1019 aa16.79■□□□□ 0.28
HLA-DPA1-243ENST00000437811 ZBTB38Q8NAP3 1195 aaPredicted RBP16.79■□□□□ 0.28
HLA-DPA1-243ENST00000437811 UBN2Q6ZU65 1347 aa16.78■□□□□ 0.28
HLA-DPA1-243ENST00000437811 RFX5P48382 616 aaPredicted RBP16.78■□□□□ 0.28
HLA-DPA1-243ENST00000437811 C16orf71Q8IYS4 520 aaPredicted RBP16.78■□□□□ 0.28
HLA-DPA1-243ENST00000437811 RHPN1Q8TCX5 695 aa16.78■□□□□ 0.28
HLA-DPA1-243ENST00000437811 KIF1BPQ96EK5 621 aa16.78■□□□□ 0.28
HLA-DPA1-243ENST00000437811 PLA2G12BQ9BX93 195 aa16.78■□□□□ 0.28
HLA-DPA1-243ENST00000437811 PA2G4Q9UQ80 394 aaKnown RBP16.78■□□□□ 0.28
HLA-DPA1-243ENST00000437811 GNPATO15228 680 aa16.77■□□□□ 0.28
HLA-DPA1-243ENST00000437811 RTL5Q5HYW3 569 aaPredicted RBP16.77■□□□□ 0.28
HLA-DPA1-243ENST00000437811 SLC27A3Q5K4L6 730 aa16.77■□□□□ 0.28
HLA-DPA1-243ENST00000437811 LMBR1LQ6UX01 489 aa16.77■□□□□ 0.28
HLA-DPA1-243ENST00000437811 ERC1Q8IUD2 1116 aa16.77■□□□□ 0.28
HLA-DPA1-243ENST00000437811 OTUD7AQ8TE49 926 aaPredicted RBP16.77■□□□□ 0.28
HLA-DPA1-243ENST00000437811 ZNF652Q9Y2D9 606 aa16.77■□□□□ 0.28
HLA-DPA1-243ENST00000437811 RBM19Q9Y4C8 960 aaKnown RBP16.77■□□□□ 0.28
HLA-DPA1-243ENST00000437811 C4AP0C0L4 1744 aa16.77■□□□□ 0.28
HLA-DPA1-243ENST00000437811 SALL3Q9BXA9 1300 aa16.77■□□□□ 0.27
HLA-DPA1-243ENST00000437811 OS9Q13438 667 aaPredicted RBP16.77■□□□□ 0.27
HLA-DPA1-243ENST00000437811 PARP10Q53GL7 1025 aa16.77■□□□□ 0.27
HLA-DPA1-243ENST00000437811 BMP2KLQ5H9B9 411 aa16.77■□□□□ 0.27
HLA-DPA1-243ENST00000437811 COPRSQ9NQ92 184 aa16.77■□□□□ 0.27
HLA-DPA1-243ENST00000437811 LRRC4BQ9NT99 713 aa16.77■□□□□ 0.27
HLA-DPA1-243ENST00000437811 TNS1Q9HBL0 1735 aaKnown RBP16.76■□□□□ 0.27
HLA-DPA1-243ENST00000437811 LAMB2P55268 1798 aa16.76■□□□□ 0.27
HLA-DPA1-243ENST00000437811 CLEC4GQ6UXB4 293 aa16.76■□□□□ 0.27
HLA-DPA1-243ENST00000437811 FAM89AQ96GI7 184 aa16.76■□□□□ 0.27
HLA-DPA1-243ENST00000437811 RTCBQ9Y3I0 505 aaKnown RBP16.76■□□□□ 0.27
HLA-DPA1-243ENST00000437811 UBR3Q6ZT12 1888 aa16.75■□□□□ 0.27
HLA-DPA1-243ENST00000437811 G3BP1Q13283 466 aaKnown RBP eCLIP16.75■□□□□ 0.27
HLA-DPA1-243ENST00000437811 TTC22Q5TAA0 569 aa16.75■□□□□ 0.27
HLA-DPA1-243ENST00000437811 AK7Q96M32 723 aa16.75■□□□□ 0.27
HLA-DPA1-243ENST00000437811 OSBPL3Q9H4L5 887 aa16.75■□□□□ 0.27
HLA-DPA1-243ENST00000437811 IL1RAPL2Q9NP60 686 aa16.75■□□□□ 0.27
HLA-DPA1-243ENST00000437811 NARFQ9UHQ1 456 aa16.75■□□□□ 0.27
HLA-DPA1-243ENST00000437811 TRMT112Q9UI30 125 aaKnown RBP16.75■□□□□ 0.27
HLA-DPA1-243ENST00000437811 U3KPZ7 1027 aaPredicted RBP16.75■□□□□ 0.27
HLA-DPA1-243ENST00000437811 MYH3P11055 1940 aa16.74■□□□□ 0.27
HLA-DPA1-243ENST00000437811 RGPD3A6NKT7 1758 aaPredicted RBP16.74■□□□□ 0.27
HLA-DPA1-243ENST00000437811 RGPD4Q7Z3J3 1758 aa16.74■□□□□ 0.27
HLA-DPA1-243ENST00000437811 PTPN12Q05209 780 aaKnown RBP16.74■□□□□ 0.27
HLA-DPA1-243ENST00000437811 ILDR1Q86SU0 546 aaPredicted RBP16.74■□□□□ 0.27
HLA-DPA1-243ENST00000437811 BCL11AQ9H165 835 aa16.74■□□□□ 0.27
HLA-DPA1-243ENST00000437811 COL24A1Q17RW2 1714 aa16.74■□□□□ 0.27
HLA-DPA1-243ENST00000437811 HMGB2P26583 209 aaKnown RBP16.73■□□□□ 0.27
HLA-DPA1-243ENST00000437811 PDE1AP54750 535 aa16.73■□□□□ 0.27
HLA-DPA1-243ENST00000437811 SUSD4Q5VX71 490 aa16.73■□□□□ 0.27
HLA-DPA1-243ENST00000437811 KLHDC4Q8TBB5 520 aa16.73■□□□□ 0.27
HLA-DPA1-243ENST00000437811 UTP14AQ9BVJ6 771 aaKnown RBP16.73■□□□□ 0.27
HLA-DPA1-243ENST00000437811 BCL2L12Q9HB09 334 aa16.73■□□□□ 0.27
HLA-DPA1-243ENST00000437811 STAP2Q9UGK3 403 aa16.73■□□□□ 0.27
HLA-DPA1-243ENST00000437811 NIP7Q9Y221 180 aaKnown RBP eCLIP16.73■□□□□ 0.27
HLA-DPA1-243ENST00000437811 CHMP3Q9Y3E7 222 aa16.73■□□□□ 0.27
HLA-DPA1-243ENST00000437811 TUBGCP6Q96RT7 1819 aa16.73■□□□□ 0.27
HLA-DPA1-243ENST00000437811 DDX60Q8IY21 1712 aaKnown RBP16.72■□□□□ 0.27
HLA-DPA1-243ENST00000437811 AOX1Q06278 1338 aa16.72■□□□□ 0.27
HLA-DPA1-243ENST00000437811 SH3TC1Q8TE82 1336 aa16.72■□□□□ 0.27
HLA-DPA1-243ENST00000437811 IRS4O14654 1257 aaPredicted RBP16.72■□□□□ 0.27
HLA-DPA1-243ENST00000437811 SASH1O94885 1247 aa16.72■□□□□ 0.27
HLA-DPA1-243ENST00000437811 CSF1RP07333 972 aa16.72■□□□□ 0.27
HLA-DPA1-243ENST00000437811 GSPT1P15170 499 aaKnown RBP16.72■□□□□ 0.27
HLA-DPA1-243ENST00000437811 MX1P20591 662 aa16.72■□□□□ 0.27
HLA-DPA1-243ENST00000437811 TXNRD1Q16881 649 aa16.72■□□□□ 0.27
HLA-DPA1-243ENST00000437811 SMIM5Q71RC9 77 aa16.72■□□□□ 0.27
HLA-DPA1-243ENST00000437811 AMIGO3Q86WK7 504 aa16.72■□□□□ 0.27
HLA-DPA1-243ENST00000437811 SYNE4Q8N205 404 aa16.72■□□□□ 0.27
HLA-DPA1-243ENST00000437811 SIL1Q9H173 461 aa16.72■□□□□ 0.27
HLA-DPA1-243ENST00000437811 PLSCR1O15162 318 aa16.71■□□□□ 0.27
HLA-DPA1-243ENST00000437811 PDE8AO60658 829 aa16.71■□□□□ 0.27
HLA-DPA1-243ENST00000437811 NTSR2O95665 410 aa16.71■□□□□ 0.27
HLA-DPA1-243ENST00000437811 CTSWP56202 376 aa16.71■□□□□ 0.27
HLA-DPA1-243ENST00000437811 USPL1Q5W0Q7 1092 aa16.71■□□□□ 0.27
HLA-DPA1-243ENST00000437811 CLASRPQ8N2M8 674 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms