RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 ACSBG1Q96GR2 724 aa18.81■□□□□ 0.6
SGCE-205ENST00000437425 PLA2G12BQ9BX93 195 aa18.81■□□□□ 0.6
SGCE-205ENST00000437425 BCL11AQ9H165 835 aa18.81■□□□□ 0.6
SGCE-205ENST00000437425 CCDC87Q9NVE4 849 aa18.81■□□□□ 0.6
SGCE-205ENST00000437425 KAT6BQ8WYB5 2073 aa18.81■□□□□ 0.6
SGCE-205ENST00000437425 EPHA10Q5JZY3 1008 aa18.8■□□□□ 0.6
SGCE-205ENST00000437425 ZBTB38Q8NAP3 1195 aaPredicted RBP18.8■□□□□ 0.6
SGCE-205ENST00000437425 FBXO3Q9UK99 471 aa18.8■□□□□ 0.6
SGCE-205ENST00000437425 ZBTB1Q9Y2K1 713 aa18.8■□□□□ 0.6
SGCE-205ENST00000437425 ZNF330Q9Y3S2 320 aaPredicted RBP18.8■□□□□ 0.6
SGCE-205ENST00000437425 RREB1Q92766 1687 aa18.8■□□□□ 0.6
SGCE-205ENST00000437425 RGL2O15211 777 aa18.79■□□□□ 0.6
SGCE-205ENST00000437425 RFX5P48382 616 aaPredicted RBP18.79■□□□□ 0.6
SGCE-205ENST00000437425 FOXO4P98177 505 aa18.79■□□□□ 0.6
SGCE-205ENST00000437425 CNTROBQ8N137 903 aa18.79■□□□□ 0.6
SGCE-205ENST00000437425 GJD4Q96KN9 370 aaPredicted RBP18.79■□□□□ 0.6
SGCE-205ENST00000437425 ECHDC1Q9NTX5 307 aa18.79■□□□□ 0.6
SGCE-205ENST00000437425 TRPC5Q9UL62 973 aaPredicted RBP18.79■□□□□ 0.6
SGCE-205ENST00000437425 PA2G4Q9UQ80 394 aaKnown RBP18.79■□□□□ 0.6
SGCE-205ENST00000437425 CDHR2Q9BYE9 1310 aa18.79■□□□□ 0.6
SGCE-205ENST00000437425 TRIM6-TRIM34B2RNG4 842 aa18.79■□□□□ 0.6
SGCE-205ENST00000437425 EIF5P55010 431 aaKnown RBP18.79■□□□□ 0.6
SGCE-205ENST00000437425 PTPN12Q05209 780 aaKnown RBP18.79■□□□□ 0.6
SGCE-205ENST00000437425 LMBR1LQ6UX01 489 aa18.79■□□□□ 0.6
SGCE-205ENST00000437425 DZIP3Q86Y13 1208 aaKnown RBP18.79■□□□□ 0.6
SGCE-205ENST00000437425 NUTM1Q86Y26 1132 aa18.79■□□□□ 0.6
SGCE-205ENST00000437425 TUBGCP6Q96RT7 1819 aa18.78■□□□□ 0.6
SGCE-205ENST00000437425 A0A0G2JS52 829 aa18.78■□□□□ 0.6
SGCE-205ENST00000437425 ONECUT3O60422 494 aaPredicted RBP18.78■□□□□ 0.6
SGCE-205ENST00000437425 MYT1Q01538 1121 aa18.78■□□□□ 0.6
SGCE-205ENST00000437425 IL27Q8NEV9 243 aa18.78■□□□□ 0.6
SGCE-205ENST00000437425 PI4K2BQ8TCG2 481 aa18.78■□□□□ 0.6
SGCE-205ENST00000437425 SASH1O94885 1247 aa18.77■□□□□ 0.6
SGCE-205ENST00000437425 HSP90B1P14625 803 aaKnown RBP18.77■□□□□ 0.6
SGCE-205ENST00000437425 AACSQ86V21 672 aa18.77■□□□□ 0.6
SGCE-205ENST00000437425 AK7Q96M32 723 aa18.77■□□□□ 0.6
SGCE-205ENST00000437425 ATRNO75882 1429 aa18.77■□□□□ 0.6
SGCE-205ENST00000437425 CIAO1O76071 339 aa18.76■□□□□ 0.59
SGCE-205ENST00000437425 CRKLP46109 303 aaKnown RBP18.76■□□□□ 0.59
SGCE-205ENST00000437425 AFF2P51816 1311 aa18.76■□□□□ 0.59
SGCE-205ENST00000437425 ANKRD36CQ5JPF3 1778 aa18.76■□□□□ 0.59
SGCE-205ENST00000437425 INTS5Q6P9B9 1019 aaKnown RBP18.76■□□□□ 0.59
SGCE-205ENST00000437425 GPR108Q9NPR9 543 aa18.76■□□□□ 0.59
SGCE-205ENST00000437425 NLRP10Q86W26 655 aa18.75■□□□□ 0.59
SGCE-205ENST00000437425 RILPL2Q969X0 211 aa18.75■□□□□ 0.59
SGCE-205ENST00000437425 ARXQ96QS3 562 aa18.75■□□□□ 0.59
SGCE-205ENST00000437425 IL15P40933 162 aaPredicted RBP18.74■□□□□ 0.59
SGCE-205ENST00000437425 HIP1O00291 1037 aa18.74■□□□□ 0.59
SGCE-205ENST00000437425 CHMLP26374 656 aa18.74■□□□□ 0.59
SGCE-205ENST00000437425 CCDC57Q2TAC2 916 aa18.74■□□□□ 0.59
SGCE-205ENST00000437425 PARP10Q53GL7 1025 aa18.74■□□□□ 0.59
SGCE-205ENST00000437425 SNX21Q969T3 373 aa18.74■□□□□ 0.59
SGCE-205ENST00000437425 USP26Q9BXU7 913 aa18.74■□□□□ 0.59
SGCE-205ENST00000437425 SIL1Q9H173 461 aa18.74■□□□□ 0.59
SGCE-205ENST00000437425 ZNF652Q9Y2D9 606 aa18.74■□□□□ 0.59
SGCE-205ENST00000437425 CHMP3Q9Y3E7 222 aa18.74■□□□□ 0.59
SGCE-205ENST00000437425 NHSQ6T4R5 1651 aa18.74■□□□□ 0.59
SGCE-205ENST00000437425 CNTNAP4Q9C0A0 1308 aa18.73■□□□□ 0.59
SGCE-205ENST00000437425 CSF1RP07333 972 aa18.73■□□□□ 0.59
SGCE-205ENST00000437425 HMGB2P26583 209 aaKnown RBP18.73■□□□□ 0.59
SGCE-205ENST00000437425 TICAM2Q86XR7 235 aa18.73■□□□□ 0.59
SGCE-205ENST00000437425 ZNF34Q8IZ26 560 aa18.73■□□□□ 0.59
SGCE-205ENST00000437425 EVI5LQ96CN4 794 aa18.73■□□□□ 0.59
SGCE-205ENST00000437425 ESYT1Q9BSJ8 1104 aa18.73■□□□□ 0.59
SGCE-205ENST00000437425 KCNQ2O43526 872 aa18.72■□□□□ 0.59
SGCE-205ENST00000437425 MCCP23508 829 aa18.72■□□□□ 0.59
SGCE-205ENST00000437425 ITPK1Q13572 414 aa18.72■□□□□ 0.59
SGCE-205ENST00000437425 HLFQ16534 295 aa18.72■□□□□ 0.59
SGCE-205ENST00000437425 RC3H1Q5TC82 1133 aaKnown RBP18.72■□□□□ 0.59
SGCE-205ENST00000437425 TSHZ3Q63HK5 1081 aa18.72■□□□□ 0.59
SGCE-205ENST00000437425 RUFY2Q8WXA3 655 aa18.72■□□□□ 0.59
SGCE-205ENST00000437425 JARID2Q92833 1246 aaPredicted RBP18.72■□□□□ 0.59
SGCE-205ENST00000437425 EAF2Q96CJ1 260 aaPredicted RBP18.72■□□□□ 0.59
SGCE-205ENST00000437425 COL5A3P25940 1745 aaPredicted RBP18.72■□□□□ 0.59
SGCE-205ENST00000437425 EYA2O00167 538 aa18.71■□□□□ 0.59
SGCE-205ENST00000437425 TNNI3KQ59H18 835 aa18.71■□□□□ 0.59
SGCE-205ENST00000437425 CLEC4GQ6UXB4 293 aa18.71■□□□□ 0.59
SGCE-205ENST00000437425 HSCBQ8IWL3 235 aa18.71■□□□□ 0.59
SGCE-205ENST00000437425 FPGT-TNNI3KV9GXZ4 949 aa18.71■□□□□ 0.59
SGCE-205ENST00000437425 NUP98P52948 1817 aa18.71■□□□□ 0.59
SGCE-205ENST00000437425 RABEP1Q15276 862 aa18.7■□□□□ 0.58
SGCE-205ENST00000437425 ANP32EQ9BTT0 268 aa18.7■□□□□ 0.58
SGCE-205ENST00000437425 IFIT5Q13325 482 aaKnown RBP18.69■□□□□ 0.58
SGCE-205ENST00000437425 KLHDC4Q8TBB5 520 aa18.69■□□□□ 0.58
SGCE-205ENST00000437425 TRMT112Q9UI30 125 aaKnown RBP18.69■□□□□ 0.58
SGCE-205ENST00000437425 TBC1D2BQ9UPU7 963 aa18.69■□□□□ 0.58
SGCE-205ENST00000437425 PDE8AO60658 829 aa18.69■□□□□ 0.58
SGCE-205ENST00000437425 ATP5JP18859 108 aa18.69■□□□□ 0.58
SGCE-205ENST00000437425 TFCP2Q12800 502 aa18.69■□□□□ 0.58
SGCE-205ENST00000437425 FAM89AQ96GI7 184 aa18.69■□□□□ 0.58
SGCE-205ENST00000437425 TBC1D2Q9BYX2 928 aa18.69■□□□□ 0.58
SGCE-205ENST00000437425 AK9Q5TCS8 1911 aa18.68■□□□□ 0.58
SGCE-205ENST00000437425 IRS4O14654 1257 aaPredicted RBP18.68■□□□□ 0.58
SGCE-205ENST00000437425 CAMTA2O94983 1202 aa18.68■□□□□ 0.58
SGCE-205ENST00000437425 GPTP24298 496 aa18.68■□□□□ 0.58
SGCE-205ENST00000437425 ANAPC15P60006 121 aa18.68■□□□□ 0.58
SGCE-205ENST00000437425 RTL5Q5HYW3 569 aaPredicted RBP18.68■□□□□ 0.58
SGCE-205ENST00000437425 AKAP2Q9Y2D5 859 aa18.68■□□□□ 0.58
SGCE-205ENST00000437425 CTSWP56202 376 aa18.67■□□□□ 0.58
SGCE-205ENST00000437425 TAF7LQ5H9L4 462 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms