RNA–Protein interactions for RNA: ENST00000436442.2

RPP21-223, Transcript of ribonuclease P/MRP subunit p21, human

TSL 1 (best) BASIC

Gene RPP21, Length 522 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPP21-223	ENST00000436442	MKI67	P46013	3256 aa	Known RBP	13.45	□□□□□ -0.26
RPP21-223	ENST00000436442	LMOD1	P29536	600 aa	Predicted RBP	13.45	□□□□□ -0.26
RPP21-223	ENST00000436442	HOXA10	P31260	410 aa	Predicted RBP	13.45	□□□□□ -0.26
RPP21-223	ENST00000436442	EIF6	P56537	245 aa	Known RBP	13.45	□□□□□ -0.26
RPP21-223	ENST00000436442	HLF	Q16534	295 aa		13.45	□□□□□ -0.26
RPP21-223	ENST00000436442	CC2D2B	Q6DHV5	1058 aa		13.45	□□□□□ -0.26
RPP21-223	ENST00000436442	CIAPIN1	Q6FI81	312 aa		13.45	□□□□□ -0.26
RPP21-223	ENST00000436442	GPRC5D	Q9NZD1	345 aa		13.45	□□□□□ -0.26
RPP21-223	ENST00000436442	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.45	□□□□□ -0.26
RPP21-223	ENST00000436442	RIC1	Q4ADV7	1423 aa		13.45	□□□□□ -0.26
RPP21-223	ENST00000436442	ABCC12	Q96J65	1359 aa		13.45	□□□□□ -0.26
RPP21-223	ENST00000436442	CFAP44	Q96MT7	982 aa		13.44	□□□□□ -0.26
RPP21-223	ENST00000436442	ZNF652	Q9Y2D9	606 aa		13.44	□□□□□ -0.26
RPP21-223	ENST00000436442	DIAPH1	O60610	1272 aa	Known RBP	13.43	□□□□□ -0.26
RPP21-223	ENST00000436442	CELF2	O95319	508 aa	Known RBP	13.43	□□□□□ -0.26
RPP21-223	ENST00000436442	HIRA	P54198	1017 aa	Predicted RBP	13.43	□□□□□ -0.26
RPP21-223	ENST00000436442	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.43	□□□□□ -0.26
RPP21-223	ENST00000436442	ADARB2	Q9NS39	739 aa	Known RBP	13.43	□□□□□ -0.26
RPP21-223	ENST00000436442	TIMELESS	Q9UNS1	1208 aa		13.43	□□□□□ -0.26
RPP21-223	ENST00000436442	POLR2A	P24928	1970 aa	Known RBP	13.43	□□□□□ -0.26
RPP21-223	ENST00000436442	KIF7	Q2M1P5	1343 aa		13.42	□□□□□ -0.26
RPP21-223	ENST00000436442	KNSTRN	Q9Y448	316 aa		13.42	□□□□□ -0.26
RPP21-223	ENST00000436442	LAMB4	A4D0S4	1761 aa		13.42	□□□□□ -0.26
RPP21-223	ENST00000436442	BTBD11	A6QL63	1104 aa		13.41	□□□□□ -0.26
RPP21-223	ENST00000436442	FAM155A	B1AL88	458 aa	Predicted RBP	13.41	□□□□□ -0.26
RPP21-223	ENST00000436442	HSPA5	P11021	654 aa	Known RBP	13.41	□□□□□ -0.26
RPP21-223	ENST00000436442	GRIPAP1	Q4V328	841 aa		13.41	□□□□□ -0.26
RPP21-223	ENST00000436442	PRPF38B	Q5VTL8	546 aa	Known RBP	13.41	□□□□□ -0.26
RPP21-223	ENST00000436442	NPM2	Q86SE8	214 aa	Known RBP	13.41	□□□□□ -0.26
RPP21-223	ENST00000436442	LARGE2	Q8N3Y3	721 aa		13.41	□□□□□ -0.26
RPP21-223	ENST00000436442	GAS2L2	Q8NHY3	880 aa		13.41	□□□□□ -0.26
RPP21-223	ENST00000436442	HTT	P42858	3142 aa		13.41	□□□□□ -0.26
RPP21-223	ENST00000436442	AKAP11	Q9UKA4	1901 aa		13.41	□□□□□ -0.26
RPP21-223	ENST00000436442	FAM177B	A6PVY3	158 aa		13.4	□□□□□ -0.26
RPP21-223	ENST00000436442	PER1	O15534	1290 aa	Predicted RBP	13.4	□□□□□ -0.26
RPP21-223	ENST00000436442	SOX10	P56693	466 aa		13.4	□□□□□ -0.26
RPP21-223	ENST00000436442	CXCL9	Q07325	125 aa		13.4	□□□□□ -0.26
RPP21-223	ENST00000436442	NOG	Q13253	232 aa		13.4	□□□□□ -0.26
RPP21-223	ENST00000436442	PHACTR3	Q96KR7	559 aa		13.4	□□□□□ -0.26
RPP21-223	ENST00000436442	NPC1L1	Q9UHC9	1359 aa		13.4	□□□□□ -0.26
RPP21-223	ENST00000436442	SNRPA1	P09661	255 aa	Known RBP	13.39	□□□□□ -0.27
RPP21-223	ENST00000436442	NUTM1	Q86Y26	1132 aa		13.39	□□□□□ -0.27
RPP21-223	ENST00000436442	ZC3H15	Q8WU90	426 aa	Known RBP	13.39	□□□□□ -0.27
RPP21-223	ENST00000436442	CRAMP1	Q96RY5	1269 aa		13.39	□□□□□ -0.27
RPP21-223	ENST00000436442	VPS33B	Q9H267	617 aa		13.39	□□□□□ -0.27
RPP21-223	ENST00000436442	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.38	□□□□□ -0.27
RPP21-223	ENST00000436442	GMPS	P49915	693 aa	Predicted RBP	13.38	□□□□□ -0.27
RPP21-223	ENST00000436442	C3orf67	Q6ZVT6	689 aa		13.38	□□□□□ -0.27
RPP21-223	ENST00000436442	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.38	□□□□□ -0.27
RPP21-223	ENST00000436442	SAGE1	Q9NXZ1	904 aa		13.38	□□□□□ -0.27
RPP21-223	ENST00000436442	UBN2	Q6ZU65	1347 aa		13.38	□□□□□ -0.27
RPP21-223	ENST00000436442	CDHR2	Q9BYE9	1310 aa		13.38	□□□□□ -0.27
RPP21-223	ENST00000436442	LAMB2	P55268	1798 aa		13.37	□□□□□ -0.27
RPP21-223	ENST00000436442	CENPF	P49454	3210 aa		13.37	□□□□□ -0.27
RPP21-223	ENST00000436442	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.37	□□□□□ -0.27
RPP21-223	ENST00000436442	AOC3	Q16853	763 aa		13.37	□□□□□ -0.27
RPP21-223	ENST00000436442	DLK2	Q6UY11	383 aa		13.37	□□□□□ -0.27
RPP21-223	ENST00000436442	NIM1K	Q8IY84	436 aa		13.37	□□□□□ -0.27
RPP21-223	ENST00000436442	TRPM4	Q8TD43	1214 aa		13.37	□□□□□ -0.27
RPP21-223	ENST00000436442	ZNRF3	Q9ULT6	936 aa		13.37	□□□□□ -0.27
RPP21-223	ENST00000436442	ERVV-1	B6SEH8	477 aa		13.36	□□□□□ -0.27
RPP21-223	ENST00000436442	PPEF1	O14829	653 aa	Predicted RBP	13.36	□□□□□ -0.27
RPP21-223	ENST00000436442	CDC37L1	Q7L3B6	337 aa		13.36	□□□□□ -0.27
RPP21-223	ENST00000436442	NYX	Q9GZU5	481 aa		13.36	□□□□□ -0.27
RPP21-223	ENST00000436442	ANKRD36C	Q5JPF3	1778 aa		13.35	□□□□□ -0.27
RPP21-223	ENST00000436442	SHTN1	A0MZ66	631 aa		13.35	□□□□□ -0.27
RPP21-223	ENST00000436442	PPIP5K2	O43314	1243 aa		13.35	□□□□□ -0.27
RPP21-223	ENST00000436442	RPGR	Q92834	1020 aa	Known RBP	13.35	□□□□□ -0.27
RPP21-223	ENST00000436442	RNF186	Q9NXI6	227 aa		13.35	□□□□□ -0.27
RPP21-223	ENST00000436442	ATP6V0A2	Q9Y487	856 aa		13.35	□□□□□ -0.27
RPP21-223	ENST00000436442	BRCA2	P51587	3418 aa		13.35	□□□□□ -0.27
RPP21-223	ENST00000436442	DUOX1	Q9NRD9	1551 aa		13.35	□□□□□ -0.27
RPP21-223	ENST00000436442	TAF1	P21675	1872 aa		13.34	□□□□□ -0.27
RPP21-223	ENST00000436442	NTSR2	O95665	410 aa		13.34	□□□□□ -0.27
RPP21-223	ENST00000436442	GTF2E1	P29083	439 aa	Predicted RBP	13.34	□□□□□ -0.27
RPP21-223	ENST00000436442	HUNK	P57058	714 aa		13.34	□□□□□ -0.27
RPP21-223	ENST00000436442	SUSD4	Q5VX71	490 aa		13.34	□□□□□ -0.27
RPP21-223	ENST00000436442	ZNF34	Q8IZ26	560 aa		13.34	□□□□□ -0.27
RPP21-223	ENST00000436442	RSPH6A	Q9H0K4	717 aa		13.34	□□□□□ -0.27
RPP21-223	ENST00000436442	KDM3B	Q7LBC6	1761 aa		13.34	□□□□□ -0.27
RPP21-223	ENST00000436442	KIF23	Q02241	960 aa	Predicted RBP	13.33	□□□□□ -0.28
RPP21-223	ENST00000436442	RGMB	Q6NW40	437 aa		13.33	□□□□□ -0.28
RPP21-223	ENST00000436442	TTLL7	Q6ZT98	887 aa		13.33	□□□□□ -0.28
RPP21-223	ENST00000436442	RBM17	Q96I25	401 aa	Known RBP	13.33	□□□□□ -0.28
RPP21-223	ENST00000436442	ZNF408	Q9H9D4	720 aa		13.33	□□□□□ -0.28
RPP21-223	ENST00000436442	MAP3K15	Q6ZN16	1313 aa		13.33	□□□□□ -0.28
RPP21-223	ENST00000436442	LRRC37A	A6NMS7	1700 aa		13.33	□□□□□ -0.28
RPP21-223	ENST00000436442	YDJC	A8MPS7	323 aa		13.32	□□□□□ -0.28
RPP21-223	ENST00000436442	TCERG1	O14776	1098 aa	Known RBP	13.32	□□□□□ -0.28
RPP21-223	ENST00000436442	U2SURP	O15042	1029 aa	Known RBP	13.32	□□□□□ -0.28
RPP21-223	ENST00000436442	KIAA2012	Q0VF49	1180 aa		13.32	□□□□□ -0.28
RPP21-223	ENST00000436442	MCM10	Q7L590	875 aa		13.32	□□□□□ -0.28
RPP21-223	ENST00000436442	USP48	Q86UV5	1035 aa		13.32	□□□□□ -0.28
RPP21-223	ENST00000436442	CNOT7	Q9UIV1	285 aa	Known RBP	13.32	□□□□□ -0.28
RPP21-223	ENST00000436442	SZT2	Q5T011	3432 aa		13.32	□□□□□ -0.28
RPP21-223	ENST00000436442	TRPA1	O75762	1119 aa		13.31	□□□□□ -0.28
RPP21-223	ENST00000436442	RAD17	O75943	681 aa		13.31	□□□□□ -0.28
RPP21-223	ENST00000436442	PRKAR2B	P31323	418 aa		13.31	□□□□□ -0.28
RPP21-223	ENST00000436442	SLC10A5	Q5PT55	438 aa		13.31	□□□□□ -0.28
RPP21-223	ENST00000436442	CTU1	Q7Z7A3	348 aa	Known RBP	13.31	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms