RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 CNKSR1Q969H4 720 aa10.27□□□□□ -0.77
VPS50-203ENST00000436177 TAOK3Q9H2K8 898 aa10.27□□□□□ -0.77
VPS50-203ENST00000436177 SCN7AQ01118 1682 aa10.27□□□□□ -0.77
VPS50-203ENST00000436177 MAPK8IP3Q9UPT6 1336 aa10.27□□□□□ -0.77
VPS50-203ENST00000436177 GLTPD2A6NH11 291 aa10.26□□□□□ -0.77
VPS50-203ENST00000436177 NFKBIEO00221 500 aa10.26□□□□□ -0.77
VPS50-203ENST00000436177 GTF2E1P29083 439 aaPredicted RBP10.26□□□□□ -0.77
VPS50-203ENST00000436177 PIP4K2AP48426 406 aaPredicted RBP10.26□□□□□ -0.77
VPS50-203ENST00000436177 ERFEQ4G0M1 354 aa10.26□□□□□ -0.77
VPS50-203ENST00000436177 IFFO2Q5TF58 517 aa10.26□□□□□ -0.77
VPS50-203ENST00000436177 STYK1Q6J9G0 422 aa10.26□□□□□ -0.77
VPS50-203ENST00000436177 CLEC4GQ6UXB4 293 aa10.26□□□□□ -0.77
VPS50-203ENST00000436177 PNISRQ8TF01 805 aaKnown RBP10.26□□□□□ -0.77
VPS50-203ENST00000436177 CHRM1P11229 460 aaPredicted RBP10.25□□□□□ -0.77
VPS50-203ENST00000436177 DCTN1Q14203 1278 aa10.25□□□□□ -0.77
VPS50-203ENST00000436177 TAF7Q15545 349 aaPredicted RBP10.25□□□□□ -0.77
VPS50-203ENST00000436177 PRPF40BQ6NWY9 871 aaKnown RBP10.25□□□□□ -0.77
VPS50-203ENST00000436177 TPTE2Q6XPS3 522 aa10.25□□□□□ -0.77
VPS50-203ENST00000436177 C3orf67Q6ZVT6 689 aa10.25□□□□□ -0.77
VPS50-203ENST00000436177 IFNLR1Q8IU57 520 aaPredicted RBP10.25□□□□□ -0.77
VPS50-203ENST00000436177 MASTLQ96GX5 879 aa10.25□□□□□ -0.77
VPS50-203ENST00000436177 PNNQ9H307 717 aaKnown RBP10.25□□□□□ -0.77
VPS50-203ENST00000436177 NIP7Q9Y221 180 aaKnown RBP eCLIP10.25□□□□□ -0.77
VPS50-203ENST00000436177 USP16Q9Y5T5 823 aa10.25□□□□□ -0.77
VPS50-203ENST00000436177 TNRC6CQ9HCJ0 1690 aaKnown RBP10.25□□□□□ -0.77
VPS50-203ENST00000436177 NRXN2Q9P2S2 1712 aa10.24□□□□□ -0.77
VPS50-203ENST00000436177 FAM177BA6PVY3 158 aa10.24□□□□□ -0.77
VPS50-203ENST00000436177 KIF6Q6ZMV9 814 aa10.24□□□□□ -0.77
VPS50-203ENST00000436177 SPOCK2Q92563 424 aa10.24□□□□□ -0.77
VPS50-203ENST00000436177 MARVELD3Q96A59 401 aa10.24□□□□□ -0.77
VPS50-203ENST00000436177 AFDNP55196 1824 aaKnown RBP10.23□□□□□ -0.77
VPS50-203ENST00000436177 PRAMEF22A3QJZ6 481 aa10.23□□□□□ -0.77
VPS50-203ENST00000436177 RGL2O15211 777 aa10.23□□□□□ -0.77
VPS50-203ENST00000436177 SRGNP10124 158 aa10.23□□□□□ -0.77
VPS50-203ENST00000436177 NPR1P16066 1061 aa10.23□□□□□ -0.77
VPS50-203ENST00000436177 CCDC93Q567U6 631 aa10.23□□□□□ -0.77
VPS50-203ENST00000436177 KLRG1Q96E93 195 aa10.23□□□□□ -0.77
VPS50-203ENST00000436177 LTBP3Q9NS15 1303 aa10.23□□□□□ -0.77
VPS50-203ENST00000436177 VIRMAQ69YN4 1812 aaKnown RBP10.23□□□□□ -0.77
VPS50-203ENST00000436177 SIPA1L3O60292 1781 aaPredicted RBP10.22□□□□□ -0.77
VPS50-203ENST00000436177 DLEC1Q9Y238 1755 aa10.22□□□□□ -0.77
VPS50-203ENST00000436177 SNPHO15079 494 aa10.22□□□□□ -0.77
VPS50-203ENST00000436177 NGEFQ8N5V2 710 aa10.22□□□□□ -0.77
VPS50-203ENST00000436177 NYXQ9GZU5 481 aa10.22□□□□□ -0.77
VPS50-203ENST00000436177 MIS18AQ9NYP9 233 aa10.22□□□□□ -0.77
VPS50-203ENST00000436177 IQCA1LA6NCM1 817 aa10.21□□□□□ -0.77
VPS50-203ENST00000436177 HTRA3P83110 453 aa10.21□□□□□ -0.77
VPS50-203ENST00000436177 PDAP1Q13442 181 aaKnown RBP10.21□□□□□ -0.77
VPS50-203ENST00000436177 NFE2L2Q16236 605 aa10.21□□□□□ -0.77
VPS50-203ENST00000436177 DNAJC5GQ8N7S2 189 aa10.21□□□□□ -0.77
VPS50-203ENST00000436177 L3MBTL3Q96JM7 780 aaPredicted RBP10.21□□□□□ -0.77
VPS50-203ENST00000436177 NBPF26B4DH59 902 aa10.2□□□□□ -0.78
VPS50-203ENST00000436177 ALDH1B1P30837 517 aa10.2□□□□□ -0.78
VPS50-203ENST00000436177 PRELPP51888 382 aa10.2□□□□□ -0.78
VPS50-203ENST00000436177 LMOD3Q0VAK6 560 aa10.2□□□□□ -0.78
VPS50-203ENST00000436177 NBPF10Q6P3W6 841 aaKnown RBP10.2□□□□□ -0.78
VPS50-203ENST00000436177 TIAM2Q8IVF5 1701 aa10.2□□□□□ -0.78
VPS50-203ENST00000436177 RTKN2Q8IZC4 609 aa10.2□□□□□ -0.78
VPS50-203ENST00000436177 NBPF15Q8N660 670 aa10.2□□□□□ -0.78
VPS50-203ENST00000436177 RPGRQ92834 1020 aaKnown RBP10.2□□□□□ -0.78
VPS50-203ENST00000436177 RRP7AQ9Y3A4 280 aaKnown RBP10.2□□□□□ -0.78
VPS50-203ENST00000436177 COL11A2P13942 1736 aaPredicted RBP10.19□□□□□ -0.78
VPS50-203ENST00000436177 WDR90Q96KV7 1748 aa10.19□□□□□ -0.78
VPS50-203ENST00000436177 MYL6BP14649 208 aa10.19□□□□□ -0.78
VPS50-203ENST00000436177 FKBP4Q02790 459 aaKnown RBP eCLIP10.19□□□□□ -0.78
VPS50-203ENST00000436177 TMX4Q9H1E5 349 aaPredicted RBP10.19□□□□□ -0.78
VPS50-203ENST00000436177 TSPYL4Q9UJ04 414 aa10.19□□□□□ -0.78
VPS50-203ENST00000436177 BCORQ6W2J9 1755 aa10.19□□□□□ -0.78
VPS50-203ENST00000436177 MAP3K15Q6ZN16 1313 aa10.18□□□□□ -0.78
VPS50-203ENST00000436177 ERVV-1B6SEH8 477 aa10.18□□□□□ -0.78
VPS50-203ENST00000436177 DDNO94850 711 aaPredicted RBP10.18□□□□□ -0.78
VPS50-203ENST00000436177 JDP2Q8WYK2 163 aa10.18□□□□□ -0.78
VPS50-203ENST00000436177 THUMPD2Q9BTF0 503 aaKnown RBP10.18□□□□□ -0.78
VPS50-203ENST00000436177 ZBTB3Q9H5J0 574 aa10.18□□□□□ -0.78
VPS50-203ENST00000436177 ZNF277Q9NRM2 450 aaPredicted RBP10.18□□□□□ -0.78
VPS50-203ENST00000436177 ANKRD31Q8N7Z5 1873 aa10.17□□□□□ -0.78
VPS50-203ENST00000436177 ERBB4Q15303 1308 aa10.17□□□□□ -0.78
VPS50-203ENST00000436177 GPTP24298 496 aa10.17□□□□□ -0.78
VPS50-203ENST00000436177 EIF4A1P60842 406 aaKnown RBP10.17□□□□□ -0.78
VPS50-203ENST00000436177 RALBP1Q15311 655 aa10.17□□□□□ -0.78
VPS50-203ENST00000436177 HLFQ16534 295 aa10.17□□□□□ -0.78
VPS50-203ENST00000436177 JMYQ8N9B5 988 aa10.17□□□□□ -0.78
VPS50-203ENST00000436177 TMEM121BQ9BXQ6 578 aaPredicted RBP10.17□□□□□ -0.78
VPS50-203ENST00000436177 SBF1O95248 1867 aa10.17□□□□□ -0.78
VPS50-203ENST00000436177 IBTKQ9P2D0 1353 aaPredicted RBP10.16□□□□□ -0.78
VPS50-203ENST00000436177 KLRG2A4D1S0 409 aaPredicted RBP10.16□□□□□ -0.78
VPS50-203ENST00000436177 WDR43Q15061 677 aaKnown RBP eCLIP10.16□□□□□ -0.78
VPS50-203ENST00000436177 PARP10Q53GL7 1025 aa10.16□□□□□ -0.78
VPS50-203ENST00000436177 EAPPQ56P03 285 aaPredicted RBP10.16□□□□□ -0.78
VPS50-203ENST00000436177 CC2D2BQ6DHV5 1058 aa10.16□□□□□ -0.78
VPS50-203ENST00000436177 TTLL7Q6ZT98 887 aa10.16□□□□□ -0.78
VPS50-203ENST00000436177 LDHDQ86WU2 507 aa10.16□□□□□ -0.78
VPS50-203ENST00000436177 NUTM1Q86Y26 1132 aa10.16□□□□□ -0.78
VPS50-203ENST00000436177 PLEKHF1Q96S99 279 aa10.16□□□□□ -0.78
VPS50-203ENST00000436177 ABCC12Q96J65 1359 aa10.15□□□□□ -0.78
VPS50-203ENST00000436177 EIF2S2P20042 333 aaKnown RBP10.15□□□□□ -0.78
VPS50-203ENST00000436177 LMOD1P29536 600 aaPredicted RBP10.15□□□□□ -0.78
VPS50-203ENST00000436177 IARSP41252 1262 aaKnown RBP10.15□□□□□ -0.78
VPS50-203ENST00000436177 EIF6P56537 245 aaKnown RBP10.15□□□□□ -0.78
VPS50-203ENST00000436177 RIPK4P57078 832 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms