RNA–Protein interactions for RNA: ENST00000436041.5

PRAMEF27-201, Transcript of PRAME family member 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF27, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF27-201ENST00000436041 XRCC6P12956 609 aaKnown RBP eCLIP15.02■□□□□ -0
PRAMEF27-201ENST00000436041 DZIP3Q86Y13 1208 aaKnown RBP15.02■□□□□ -0
PRAMEF27-201ENST00000436041 KAZALD1Q96I82 304 aa15.02■□□□□ -0
PRAMEF27-201ENST00000436041 TJP1Q07157 1748 aa15.02□□□□□ -0.01
PRAMEF27-201ENST00000436041 HSP90AA1P07900 732 aaKnown RBP15.01□□□□□ -0.01
PRAMEF27-201ENST00000436041 PTMSP20962 102 aa15.01□□□□□ -0.01
PRAMEF27-201ENST00000436041 RAB11FIP3O75154 756 aa15.01□□□□□ -0.01
PRAMEF27-201ENST00000436041 RXRBP28702 533 aa15.01□□□□□ -0.01
PRAMEF27-201ENST00000436041 RC3H1Q5TC82 1133 aaKnown RBP15.01□□□□□ -0.01
PRAMEF27-201ENST00000436041 BICC1Q9H694 974 aaKnown RBP15.01□□□□□ -0.01
PRAMEF27-201ENST00000436041 TBC1D2BQ9UPU7 963 aa15.01□□□□□ -0.01
PRAMEF27-201ENST00000436041 COL15A1P39059 1388 aa15.01□□□□□ -0.01
PRAMEF27-201ENST00000436041 ARFGEF2Q9Y6D5 1785 aa15.01□□□□□ -0.01
PRAMEF27-201ENST00000436041 MCM4P33991 863 aa15□□□□□ -0.01
PRAMEF27-201ENST00000436041 CASP7P55210 303 aa15□□□□□ -0.01
PRAMEF27-201ENST00000436041 HLFQ16534 295 aa15□□□□□ -0.01
PRAMEF27-201ENST00000436041 HSP90AB4PQ58FF6 505 aa15□□□□□ -0.01
PRAMEF27-201ENST00000436041 UBE3BQ7Z3V4 1068 aa15□□□□□ -0.01
PRAMEF27-201ENST00000436041 EXOC6BQ9Y2D4 811 aa15□□□□□ -0.01
PRAMEF27-201ENST00000436041 ZNF831Q5JPB2 1677 aa15□□□□□ -0.01
PRAMEF27-201ENST00000436041 NHSQ6T4R5 1651 aa15□□□□□ -0.01
PRAMEF27-201ENST00000436041 SURF6O75683 361 aaKnown RBP14.99□□□□□ -0.01
PRAMEF27-201ENST00000436041 TPM2P07951 284 aa14.99□□□□□ -0.01
PRAMEF27-201ENST00000436041 LINC00116Q8NCU8 138 aa14.99□□□□□ -0.01
PRAMEF27-201ENST00000436041 CICQ96RK0 1608 aaPredicted RBP14.99□□□□□ -0.01
PRAMEF27-201ENST00000436041 CNTNAP4Q9C0A0 1308 aa14.99□□□□□ -0.01
PRAMEF27-201ENST00000436041 PDIA4P13667 645 aaKnown RBP14.99□□□□□ -0.01
PRAMEF27-201ENST00000436041 LRRCC1Q9C099 1032 aa14.99□□□□□ -0.01
PRAMEF27-201ENST00000436041 CCNL1Q9UK58 526 aaPredicted RBP14.99□□□□□ -0.01
PRAMEF27-201ENST00000436041 DDX11L8A8MPP1 907 aa14.98□□□□□ -0.01
PRAMEF27-201ENST00000436041 APBB1O00213 710 aa14.98□□□□□ -0.01
PRAMEF27-201ENST00000436041 TERF1P54274 439 aa14.98□□□□□ -0.01
PRAMEF27-201ENST00000436041 JARID2Q92833 1246 aaPredicted RBP14.98□□□□□ -0.01
PRAMEF27-201ENST00000436041 CHMP5Q9NZZ3 219 aa14.98□□□□□ -0.01
PRAMEF27-201ENST00000436041 RABL6Q3YEC7 729 aaPredicted RBP14.97□□□□□ -0.01
PRAMEF27-201ENST00000436041 EPHA10Q5JZY3 1008 aa14.97□□□□□ -0.01
PRAMEF27-201ENST00000436041 NUP188Q5SRE5 1749 aa14.97□□□□□ -0.01
PRAMEF27-201ENST00000436041 SMARCA5O60264 1052 aaPredicted RBP14.97□□□□□ -0.01
PRAMEF27-201ENST00000436041 KCNQ4P56696 695 aa14.97□□□□□ -0.01
PRAMEF27-201ENST00000436041 C16orf71Q8IYS4 520 aaPredicted RBP14.97□□□□□ -0.01
PRAMEF27-201ENST00000436041 ZBTB38Q8NAP3 1195 aaPredicted RBP14.97□□□□□ -0.01
PRAMEF27-201ENST00000436041 RPS6KA4O75676 772 aa14.96□□□□□ -0.01
PRAMEF27-201ENST00000436041 PCCAP05165 728 aaPredicted RBP14.96□□□□□ -0.01
PRAMEF27-201ENST00000436041 HMGB2P26583 209 aaKnown RBP14.96□□□□□ -0.01
PRAMEF27-201ENST00000436041 NLRP10Q86W26 655 aa14.96□□□□□ -0.01
PRAMEF27-201ENST00000436041 PLEKHM2Q8IWE5 1019 aa14.96□□□□□ -0.01
PRAMEF27-201ENST00000436041 ZNF34Q8IZ26 560 aa14.96□□□□□ -0.01
PRAMEF27-201ENST00000436041 KIF1BPQ96EK5 621 aa14.96□□□□□ -0.01
PRAMEF27-201ENST00000436041 BTAF1O14981 1849 aa14.96□□□□□ -0.01
PRAMEF27-201ENST00000436041 TRIM37O94972 964 aa14.95□□□□□ -0.02
PRAMEF27-201ENST00000436041 FOXO4P98177 505 aa14.95□□□□□ -0.02
PRAMEF27-201ENST00000436041 TBC1D2Q9BYX2 928 aa14.95□□□□□ -0.02
PRAMEF27-201ENST00000436041 RGL2O15211 777 aa14.95□□□□□ -0.02
PRAMEF27-201ENST00000436041 CAMTA2O94983 1202 aa14.95□□□□□ -0.02
PRAMEF27-201ENST00000436041 CLEC4GQ6UXB4 293 aa14.95□□□□□ -0.02
PRAMEF27-201ENST00000436041 ERC1Q8IUD2 1116 aa14.95□□□□□ -0.02
PRAMEF27-201ENST00000436041 RHPN1Q8TCX5 695 aa14.95□□□□□ -0.02
PRAMEF27-201ENST00000436041 RGS17Q9UGC6 210 aaPredicted RBP14.95□□□□□ -0.02
PRAMEF27-201ENST00000436041 SBF2Q86WG5 1849 aa14.95□□□□□ -0.02
PRAMEF27-201ENST00000436041 RREB1Q92766 1687 aa14.94□□□□□ -0.02
PRAMEF27-201ENST00000436041 GPTP24298 496 aa14.94□□□□□ -0.02
PRAMEF27-201ENST00000436041 G3BP1Q13283 466 aaKnown RBP eCLIP14.94□□□□□ -0.02
PRAMEF27-201ENST00000436041 SLC27A3Q5K4L6 730 aa14.94□□□□□ -0.02
PRAMEF27-201ENST00000436041 LMBR1LQ6UX01 489 aa14.94□□□□□ -0.02
PRAMEF27-201ENST00000436041 CIZ1Q9ULV3 898 aaPredicted RBP14.94□□□□□ -0.02
PRAMEF27-201ENST00000436041 ZNF652Q9Y2D9 606 aa14.94□□□□□ -0.02
PRAMEF27-201ENST00000436041 AFDNP55196 1824 aaKnown RBP14.94□□□□□ -0.02
PRAMEF27-201ENST00000436041 OS9Q13438 667 aaPredicted RBP14.93□□□□□ -0.02
PRAMEF27-201ENST00000436041 BMP2KLQ5H9B9 411 aa14.93□□□□□ -0.02
PRAMEF27-201ENST00000436041 FAM89AQ96GI7 184 aa14.93□□□□□ -0.02
PRAMEF27-201ENST00000436041 NAP1L5Q96NT1 182 aaPredicted RBP14.93□□□□□ -0.02
PRAMEF27-201ENST00000436041 PLA2G12BQ9BX93 195 aa14.93□□□□□ -0.02
PRAMEF27-201ENST00000436041 COPRSQ9NQ92 184 aa14.93□□□□□ -0.02
PRAMEF27-201ENST00000436041 RTCBQ9Y3I0 505 aaKnown RBP14.93□□□□□ -0.02
PRAMEF27-201ENST00000436041 SKOR2Q2VWA4 1001 aaPredicted RBP14.93□□□□□ -0.02
PRAMEF27-201ENST00000436041 PARP10Q53GL7 1025 aa14.93□□□□□ -0.02
PRAMEF27-201ENST00000436041 OSBPL3Q9H4L5 887 aa14.93□□□□□ -0.02
PRAMEF27-201ENST00000436041 PA2G4Q9UQ80 394 aaKnown RBP14.93□□□□□ -0.02
PRAMEF27-201ENST00000436041 CDHR2Q9BYE9 1310 aa14.93□□□□□ -0.02
PRAMEF27-201ENST00000436041 COL5A3P25940 1745 aaPredicted RBP14.92□□□□□ -0.02
PRAMEF27-201ENST00000436041 MYH14Q7Z406 1995 aaKnown RBP14.92□□□□□ -0.02
PRAMEF27-201ENST00000436041 ESPNB1AK53 854 aa14.92□□□□□ -0.02
PRAMEF27-201ENST00000436041 RFX5P48382 616 aaPredicted RBP14.92□□□□□ -0.02
PRAMEF27-201ENST00000436041 PDCL3Q9H2J4 239 aa14.92□□□□□ -0.02
PRAMEF27-201ENST00000436041 TRMT112Q9UI30 125 aaKnown RBP14.92□□□□□ -0.02
PRAMEF27-201ENST00000436041 BRWD3Q6RI45 1802 aa14.92□□□□□ -0.02
PRAMEF27-201ENST00000436041 GNPATO15228 680 aa14.91□□□□□ -0.02
PRAMEF27-201ENST00000436041 TRAK2O60296 914 aa14.91□□□□□ -0.02
PRAMEF27-201ENST00000436041 SEC24BO95487 1268 aa14.91□□□□□ -0.02
PRAMEF27-201ENST00000436041 PTPN12Q05209 780 aaKnown RBP14.91□□□□□ -0.02
PRAMEF27-201ENST00000436041 LRRC4BQ9NT99 713 aa14.91□□□□□ -0.02
PRAMEF27-201ENST00000436041 CSF1RP07333 972 aa14.91□□□□□ -0.02
PRAMEF27-201ENST00000436041 POTEAQ6S8J7 498 aa14.91□□□□□ -0.02
PRAMEF27-201ENST00000436041 CLASRPQ8N2M8 674 aaKnown RBP14.91□□□□□ -0.02
PRAMEF27-201ENST00000436041 OTUD7AQ8TE49 926 aaPredicted RBP14.91□□□□□ -0.02
PRAMEF27-201ENST00000436041 IL1RAPL2Q9NP60 686 aa14.91□□□□□ -0.02
PRAMEF27-201ENST00000436041 NARFQ9UHQ1 456 aa14.91□□□□□ -0.02
PRAMEF27-201ENST00000436041 UBN2Q6ZU65 1347 aa14.9□□□□□ -0.02
PRAMEF27-201ENST00000436041 PDE1AP54750 535 aa14.9□□□□□ -0.02
PRAMEF27-201ENST00000436041 SUSD4Q5VX71 490 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms