RNA–Protein interactions for RNA: ENST00000433066.1

SMPD4P1-202, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 3

Gene SMPD4P1, Length 483 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-202ENST00000433066 RIC1Q4ADV7 1423 aa9.84□□□□□ -0.83
SMPD4P1-202ENST00000433066 FAM155AB1AL88 458 aaPredicted RBP9.84□□□□□ -0.83
SMPD4P1-202ENST00000433066 KCNQ3O43525 872 aa9.84□□□□□ -0.83
SMPD4P1-202ENST00000433066 ALDH1B1P30837 517 aa9.84□□□□□ -0.83
SMPD4P1-202ENST00000433066 HOXD11P31277 338 aaPredicted RBP9.84□□□□□ -0.83
SMPD4P1-202ENST00000433066 PIP4K2AP48426 406 aaPredicted RBP9.84□□□□□ -0.83
SMPD4P1-202ENST00000433066 NOGQ13253 232 aa9.84□□□□□ -0.83
SMPD4P1-202ENST00000433066 MORC1Q86VD1 984 aa9.84□□□□□ -0.83
SMPD4P1-202ENST00000433066 SAGE1Q9NXZ1 904 aa9.84□□□□□ -0.83
SMPD4P1-202ENST00000433066 USP16Q9Y5T5 823 aa9.84□□□□□ -0.83
SMPD4P1-202ENST00000433066 CEMIPQ8WUJ3 1361 aa9.84□□□□□ -0.83
SMPD4P1-202ENST00000433066 PRAMEF22A3QJZ6 481 aa9.83□□□□□ -0.84
SMPD4P1-202ENST00000433066 HOXA10P31260 410 aaPredicted RBP9.83□□□□□ -0.84
SMPD4P1-202ENST00000433066 HIRAP54198 1017 aaPredicted RBP9.83□□□□□ -0.84
SMPD4P1-202ENST00000433066 CC2D2BQ6DHV5 1058 aa9.83□□□□□ -0.84
SMPD4P1-202ENST00000433066 TPTE2Q6XPS3 522 aa9.83□□□□□ -0.84
SMPD4P1-202ENST00000433066 LARGE2Q8N3Y3 721 aa9.83□□□□□ -0.84
SMPD4P1-202ENST00000433066 FMNL2Q96PY5 1086 aa9.83□□□□□ -0.84
SMPD4P1-202ENST00000433066 NIP7Q9Y221 180 aaKnown RBP eCLIP9.83□□□□□ -0.84
SMPD4P1-202ENST00000433066 MKI67P46013 3256 aaKnown RBP9.82□□□□□ -0.84
SMPD4P1-202ENST00000433066 NBPF26B4DH59 902 aa9.82□□□□□ -0.84
SMPD4P1-202ENST00000433066 NBPF10Q6P3W6 841 aaKnown RBP9.82□□□□□ -0.84
SMPD4P1-202ENST00000433066 NBPF15Q8N660 670 aa9.82□□□□□ -0.84
SMPD4P1-202ENST00000433066 NPC1L1Q9UHC9 1359 aa9.82□□□□□ -0.84
SMPD4P1-202ENST00000433066 KIF7Q2M1P5 1343 aa9.82□□□□□ -0.84
SMPD4P1-202ENST00000433066 GMPSP49915 693 aaPredicted RBP9.81□□□□□ -0.84
SMPD4P1-202ENST00000433066 CXCL9Q07325 125 aa9.81□□□□□ -0.84
SMPD4P1-202ENST00000433066 HLFQ16534 295 aa9.81□□□□□ -0.84
SMPD4P1-202ENST00000433066 DLK2Q6UY11 383 aa9.81□□□□□ -0.84
SMPD4P1-202ENST00000433066 TRPM4Q8TD43 1214 aa9.81□□□□□ -0.84
SMPD4P1-202ENST00000433066 ZC3H15Q8WU90 426 aaKnown RBP9.81□□□□□ -0.84
SMPD4P1-202ENST00000433066 RNF186Q9NXI6 227 aa9.81□□□□□ -0.84
SMPD4P1-202ENST00000433066 ZNF652Q9Y2D9 606 aa9.81□□□□□ -0.84
SMPD4P1-202ENST00000433066 HTTP42858 3142 aa9.81□□□□□ -0.84
SMPD4P1-202ENST00000433066 CDHR2Q9BYE9 1310 aa9.81□□□□□ -0.84
SMPD4P1-202ENST00000433066 FAM177BA6PVY3 158 aa9.8□□□□□ -0.84
SMPD4P1-202ENST00000433066 TEFQ10587 303 aa9.8□□□□□ -0.84
SMPD4P1-202ENST00000433066 AOC3Q16853 763 aa9.8□□□□□ -0.84
SMPD4P1-202ENST00000433066 GRIPAP1Q4V328 841 aa9.8□□□□□ -0.84
SMPD4P1-202ENST00000433066 AMER1Q5JTC6 1135 aaPredicted RBP9.8□□□□□ -0.84
SMPD4P1-202ENST00000433066 CDC37L1Q7L3B6 337 aa9.8□□□□□ -0.84
SMPD4P1-202ENST00000433066 CTU1Q7Z7A3 348 aaKnown RBP9.8□□□□□ -0.84
SMPD4P1-202ENST00000433066 NIM1KQ8IY84 436 aa9.8□□□□□ -0.84
SMPD4P1-202ENST00000433066 ZNF408Q9H9D4 720 aa9.8□□□□□ -0.84
SMPD4P1-202ENST00000433066 HPS5Q9UPZ3 1129 aa9.8□□□□□ -0.84
SMPD4P1-202ENST00000433066 COL3A1P02461 1466 aaPredicted RBP9.79□□□□□ -0.84
SMPD4P1-202ENST00000433066 SHTN1A0MZ66 631 aa9.79□□□□□ -0.84
SMPD4P1-202ENST00000433066 GNAT3A8MTJ3 354 aa9.79□□□□□ -0.84
SMPD4P1-202ENST00000433066 HUNKP57058 714 aa9.79□□□□□ -0.84
SMPD4P1-202ENST00000433066 KIF23Q02241 960 aaPredicted RBP9.79□□□□□ -0.84
SMPD4P1-202ENST00000433066 C3orf67Q6ZVT6 689 aa9.79□□□□□ -0.84
SMPD4P1-202ENST00000433066 NPM2Q86SE8 214 aaKnown RBP9.79□□□□□ -0.84
SMPD4P1-202ENST00000433066 NUTM1Q86Y26 1132 aa9.79□□□□□ -0.84
SMPD4P1-202ENST00000433066 CRAMP1Q96RY5 1269 aa9.79□□□□□ -0.84
SMPD4P1-202ENST00000433066 RTFDC1Q9BY42 306 aaPredicted RBP9.79□□□□□ -0.84
SMPD4P1-202ENST00000433066 ZNRF3Q9ULT6 936 aa9.79□□□□□ -0.84
SMPD4P1-202ENST00000433066 IBTKQ9P2D0 1353 aaPredicted RBP9.78□□□□□ -0.84
SMPD4P1-202ENST00000433066 PPEF1O14829 653 aaPredicted RBP9.78□□□□□ -0.84
SMPD4P1-202ENST00000433066 PPIP5K2O43314 1243 aa9.78□□□□□ -0.84
SMPD4P1-202ENST00000433066 HABP4Q5JVS0 413 aaKnown RBP9.78□□□□□ -0.84
SMPD4P1-202ENST00000433066 RGMBQ6NW40 437 aa9.78□□□□□ -0.84
SMPD4P1-202ENST00000433066 CCER1Q8TC90 406 aaPredicted RBP9.78□□□□□ -0.84
SMPD4P1-202ENST00000433066 POLR3GLQ9BT43 218 aa9.78□□□□□ -0.84
SMPD4P1-202ENST00000433066 VPS33BQ9H267 617 aa9.78□□□□□ -0.84
SMPD4P1-202ENST00000433066 RNF216Q9NWF9 866 aaPredicted RBP9.78□□□□□ -0.84
SMPD4P1-202ENST00000433066 BTBD11A6QL63 1104 aa9.77□□□□□ -0.85
SMPD4P1-202ENST00000433066 TRPA1O75762 1119 aa9.77□□□□□ -0.85
SMPD4P1-202ENST00000433066 USP48Q86UV5 1035 aa9.77□□□□□ -0.85
SMPD4P1-202ENST00000433066 GAS2L2Q8NHY3 880 aa9.77□□□□□ -0.85
SMPD4P1-202ENST00000433066 CSRNP1Q96S65 589 aa9.77□□□□□ -0.85
SMPD4P1-202ENST00000433066 UBN2Q6ZU65 1347 aa9.77□□□□□ -0.85
SMPD4P1-202ENST00000433066 DIAPH1O60610 1272 aaKnown RBP9.76□□□□□ -0.85
SMPD4P1-202ENST00000433066 SLC10A3P09131 477 aa9.76□□□□□ -0.85
SMPD4P1-202ENST00000433066 SNRPA1P09661 255 aaKnown RBP9.76□□□□□ -0.85
SMPD4P1-202ENST00000433066 RPGRQ92834 1020 aaKnown RBP9.76□□□□□ -0.85
SMPD4P1-202ENST00000433066 CCDC102AQ96A19 550 aa9.76□□□□□ -0.85
SMPD4P1-202ENST00000433066 GCC1Q96CN9 775 aa9.76□□□□□ -0.85
SMPD4P1-202ENST00000433066 NYXQ9GZU5 481 aa9.76□□□□□ -0.85
SMPD4P1-202ENST00000433066 GBA2Q9HCG7 927 aaPredicted RBP9.76□□□□□ -0.85
SMPD4P1-202ENST00000433066 ATP6V0A2Q9Y487 856 aa9.76□□□□□ -0.85
SMPD4P1-202ENST00000433066 YDJCA8MPS7 323 aa9.75□□□□□ -0.85
SMPD4P1-202ENST00000433066 RAD17O75943 681 aa9.75□□□□□ -0.85
SMPD4P1-202ENST00000433066 EGFRP00533 1210 aa9.75□□□□□ -0.85
SMPD4P1-202ENST00000433066 KIAA2012Q0VF49 1180 aa9.75□□□□□ -0.85
SMPD4P1-202ENST00000433066 SUSD4Q5VX71 490 aa9.75□□□□□ -0.85
SMPD4P1-202ENST00000433066 ERVV-1B6SEH8 477 aa9.74□□□□□ -0.85
SMPD4P1-202ENST00000433066 ADM5C9JUS6 153 aa9.74□□□□□ -0.85
SMPD4P1-202ENST00000433066 TCERG1O14776 1098 aaKnown RBP9.74□□□□□ -0.85
SMPD4P1-202ENST00000433066 NTSR2O95665 410 aa9.74□□□□□ -0.85
SMPD4P1-202ENST00000433066 GTF2E1P29083 439 aaPredicted RBP9.74□□□□□ -0.85
SMPD4P1-202ENST00000433066 FXR1P51114 621 aaKnown RBP eCLIP9.74□□□□□ -0.85
SMPD4P1-202ENST00000433066 ZNF157P51786 506 aaPredicted RBP9.74□□□□□ -0.85
SMPD4P1-202ENST00000433066 PKN2Q16513 984 aaKnown RBP9.74□□□□□ -0.85
SMPD4P1-202ENST00000433066 RBM17Q96I25 401 aaKnown RBP9.74□□□□□ -0.85
SMPD4P1-202ENST00000433066 PHACTR3Q96KR7 559 aa9.74□□□□□ -0.85
SMPD4P1-202ENST00000433066 CNOT7Q9UIV1 285 aaKnown RBP9.74□□□□□ -0.85
SMPD4P1-202ENST00000433066 DUOX1Q9NRD9 1551 aa9.74□□□□□ -0.85
SMPD4P1-202ENST00000433066 TNIP1Q15025 636 aa9.73□□□□□ -0.85
SMPD4P1-202ENST00000433066 SAMD7Q7Z3H4 446 aa9.73□□□□□ -0.85
SMPD4P1-202ENST00000433066 KRT26Q7Z3Y9 468 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms