RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 MKRN1Q9UHC7 482 aaKnown RBP10.67□□□□□ -0.7
ECHDC1-207ENST00000430841 ZNF330Q9Y3S2 320 aaPredicted RBP10.67□□□□□ -0.7
ECHDC1-207ENST00000430841 DLEC1Q9Y238 1755 aa10.67□□□□□ -0.7
ECHDC1-207ENST00000430841 SERPINB2P05120 415 aa10.66□□□□□ -0.7
ECHDC1-207ENST00000430841 BICDL1Q6ZP65 573 aa10.66□□□□□ -0.7
ECHDC1-207ENST00000430841 MORC1Q86VD1 984 aa10.66□□□□□ -0.7
ECHDC1-207ENST00000430841 TTC5Q8N0Z6 440 aa10.66□□□□□ -0.7
ECHDC1-207ENST00000430841 PDZRN3Q9UPQ7 1066 aa10.66□□□□□ -0.7
ECHDC1-207ENST00000430841 CCDC88AQ3V6T2 1871 aa10.66□□□□□ -0.7
ECHDC1-207ENST00000430841 A0A087WZG4 1122 aa10.65□□□□□ -0.7
ECHDC1-207ENST00000430841 IQCA1LA6NCM1 817 aa10.65□□□□□ -0.7
ECHDC1-207ENST00000430841 PDE6BP35913 854 aa10.65□□□□□ -0.7
ECHDC1-207ENST00000430841 SULT6B1Q6IMI4 303 aa10.65□□□□□ -0.7
ECHDC1-207ENST00000430841 NARFQ9UHQ1 456 aa10.65□□□□□ -0.7
ECHDC1-207ENST00000430841 AFDNP55196 1824 aaKnown RBP10.65□□□□□ -0.71
ECHDC1-207ENST00000430841 SCN11AQ9UI33 1791 aa10.65□□□□□ -0.71
ECHDC1-207ENST00000430841 SOS1Q07889 1333 aaPredicted RBP10.64□□□□□ -0.71
ECHDC1-207ENST00000430841 STARD3NLO95772 234 aa10.64□□□□□ -0.71
ECHDC1-207ENST00000430841 NFIXQ14938 502 aa10.64□□□□□ -0.71
ECHDC1-207ENST00000430841 SOGA3Q5TF21 947 aa10.64□□□□□ -0.71
ECHDC1-207ENST00000430841 DNAJC10Q8IXB1 793 aa10.64□□□□□ -0.71
ECHDC1-207ENST00000430841 TAOK3Q9H2K8 898 aa10.64□□□□□ -0.71
ECHDC1-207ENST00000430841 CANXP27824 592 aaKnown RBP10.63□□□□□ -0.71
ECHDC1-207ENST00000430841 TM4SF1P30408 202 aa10.63□□□□□ -0.71
ECHDC1-207ENST00000430841 CTCFP49711 727 aaPredicted RBP10.63□□□□□ -0.71
ECHDC1-207ENST00000430841 ST5P78524 1137 aa10.63□□□□□ -0.71
ECHDC1-207ENST00000430841 AKAP4Q5JQC9 854 aa10.63□□□□□ -0.71
ECHDC1-207ENST00000430841 SLC52A2Q9HAB3 445 aa10.63□□□□□ -0.71
ECHDC1-207ENST00000430841 PCNTO95613 3336 aa10.62□□□□□ -0.71
ECHDC1-207ENST00000430841 C21orf2O43822 256 aa10.62□□□□□ -0.71
ECHDC1-207ENST00000430841 PPP1R37O75864 691 aa10.62□□□□□ -0.71
ECHDC1-207ENST00000430841 INTS5Q6P9B9 1019 aaKnown RBP10.62□□□□□ -0.71
ECHDC1-207ENST00000430841 AEBP1Q8IUX7 1158 aa10.62□□□□□ -0.71
ECHDC1-207ENST00000430841 BEGAINQ9BUH8 593 aa10.62□□□□□ -0.71
ECHDC1-207ENST00000430841 CARMIL3Q8ND23 1372 aa10.62□□□□□ -0.71
ECHDC1-207ENST00000430841 NFKBIEO00221 500 aa10.61□□□□□ -0.71
ECHDC1-207ENST00000430841 EAPPQ56P03 285 aaPredicted RBP10.61□□□□□ -0.71
ECHDC1-207ENST00000430841 CNBD1Q8NA66 436 aa10.61□□□□□ -0.71
ECHDC1-207ENST00000430841 CNKSR1Q969H4 720 aa10.61□□□□□ -0.71
ECHDC1-207ENST00000430841 PRDM10Q9NQV6 1147 aa10.61□□□□□ -0.71
ECHDC1-207ENST00000430841 ZBTB1Q9Y2K1 713 aa10.61□□□□□ -0.71
ECHDC1-207ENST00000430841 CACNA1SQ13698 1873 aa10.61□□□□□ -0.71
ECHDC1-207ENST00000430841 NRXN2Q9P2S2 1712 aa10.61□□□□□ -0.71
ECHDC1-207ENST00000430841 DICER1Q9UPY3 1922 aaKnown RBP10.6□□□□□ -0.71
ECHDC1-207ENST00000430841 CYP19A1P11511 503 aaPredicted RBP10.6□□□□□ -0.71
ECHDC1-207ENST00000430841 TEFQ10587 303 aa10.6□□□□□ -0.71
ECHDC1-207ENST00000430841 LDHDQ86WU2 507 aa10.6□□□□□ -0.71
ECHDC1-207ENST00000430841 PTCD2Q8WV60 388 aaKnown RBP10.6□□□□□ -0.71
ECHDC1-207ENST00000430841 KNSTRNQ9Y448 316 aa10.6□□□□□ -0.71
ECHDC1-207ENST00000430841 CNTNAP1P78357 1384 aa10.6□□□□□ -0.71
ECHDC1-207ENST00000430841 TMEM88BA6NKF7 163 aa10.59□□□□□ -0.71
ECHDC1-207ENST00000430841 FOXN1O15353 648 aa10.59□□□□□ -0.71
ECHDC1-207ENST00000430841 SLC39A6Q13433 755 aa10.59□□□□□ -0.71
ECHDC1-207ENST00000430841 SETDB2Q96T68 719 aa10.59□□□□□ -0.71
ECHDC1-207ENST00000430841 BRIP1Q9BX63 1249 aa10.59□□□□□ -0.71
ECHDC1-207ENST00000430841 STK24Q9Y6E0 443 aa10.59□□□□□ -0.71
ECHDC1-207ENST00000430841 SCN7AQ01118 1682 aa10.59□□□□□ -0.71
ECHDC1-207ENST00000430841 VIRMAQ69YN4 1812 aaKnown RBP10.58□□□□□ -0.72
ECHDC1-207ENST00000430841 ADAMTS7Q9UKP4 1686 aa10.58□□□□□ -0.72
ECHDC1-207ENST00000430841 MRC1P22897 1456 aa10.58□□□□□ -0.72
ECHDC1-207ENST00000430841 RNMTO43148 476 aaKnown RBP10.58□□□□□ -0.72
ECHDC1-207ENST00000430841 TEX13AQ9BXU3 409 aaPredicted RBP10.58□□□□□ -0.72
ECHDC1-207ENST00000430841 PANK3Q9H999 370 aa10.58□□□□□ -0.72
ECHDC1-207ENST00000430841 ABT1Q9ULW3 272 aaKnown RBP10.58□□□□□ -0.72
ECHDC1-207ENST00000430841 LTBP3Q9NS15 1303 aa10.58□□□□□ -0.72
ECHDC1-207ENST00000430841 FER1L6Q2WGJ9 1857 aa10.57□□□□□ -0.72
ECHDC1-207ENST00000430841 SCN4AP35499 1836 aa10.57□□□□□ -0.72
ECHDC1-207ENST00000430841 DDNO94850 711 aaPredicted RBP10.57□□□□□ -0.72
ECHDC1-207ENST00000430841 PTPN5P54829 565 aa10.57□□□□□ -0.72
ECHDC1-207ENST00000430841 MAP2K1Q02750 393 aaPredicted RBP10.57□□□□□ -0.72
ECHDC1-207ENST00000430841 CCDC93Q567U6 631 aa10.57□□□□□ -0.72
ECHDC1-207ENST00000430841 PRPF40BQ6NWY9 871 aaKnown RBP10.57□□□□□ -0.72
ECHDC1-207ENST00000430841 IRX2Q9BZI1 471 aaPredicted RBP10.57□□□□□ -0.72
ECHDC1-207ENST00000430841 ZNF652Q9Y2D9 606 aa10.57□□□□□ -0.72
ECHDC1-207ENST00000430841 COL11A2P13942 1736 aaPredicted RBP10.56□□□□□ -0.72
ECHDC1-207ENST00000430841 HMOX1P09601 288 aa10.56□□□□□ -0.72
ECHDC1-207ENST00000430841 LMOD1P29536 600 aaPredicted RBP10.56□□□□□ -0.72
ECHDC1-207ENST00000430841 LBX1P52954 281 aa10.56□□□□□ -0.72
ECHDC1-207ENST00000430841 EIF4G2P78344 907 aaKnown RBP eCLIP10.56□□□□□ -0.72
ECHDC1-207ENST00000430841 TBC1D9BQ66K14 1250 aa10.56□□□□□ -0.72
ECHDC1-207ENST00000430841 STYK1Q6J9G0 422 aa10.56□□□□□ -0.72
ECHDC1-207ENST00000430841 PNMA8AQ86V59 439 aaPredicted RBP10.56□□□□□ -0.72
ECHDC1-207ENST00000430841 NBPF5PQ86XG9 351 aaPredicted RBP10.56□□□□□ -0.72
ECHDC1-207ENST00000430841 MASTLQ96GX5 879 aa10.56□□□□□ -0.72
ECHDC1-207ENST00000430841 HACL1Q9UJ83 578 aa10.56□□□□□ -0.72
ECHDC1-207ENST00000430841 VPS9D1Q9Y2B5 631 aa10.56□□□□□ -0.72
ECHDC1-207ENST00000430841 ANKRD31Q8N7Z5 1873 aa10.55□□□□□ -0.72
ECHDC1-207ENST00000430841 RGS20O76081 388 aa10.55□□□□□ -0.72
ECHDC1-207ENST00000430841 GTF2E1P29083 439 aaPredicted RBP10.55□□□□□ -0.72
ECHDC1-207ENST00000430841 VEGFBP49765 207 aa10.55□□□□□ -0.72
ECHDC1-207ENST00000430841 GRM1Q13255 1194 aa10.55□□□□□ -0.72
ECHDC1-207ENST00000430841 PRR5LQ6MZQ0 368 aa10.55□□□□□ -0.72
ECHDC1-207ENST00000430841 CCDC24Q8N4L8 307 aa10.55□□□□□ -0.72
ECHDC1-207ENST00000430841 LGR6Q9HBX8 967 aa10.55□□□□□ -0.72
ECHDC1-207ENST00000430841 RYDENQ9NUL5 291 aaKnown RBP10.55□□□□□ -0.72
ECHDC1-207ENST00000430841 TBC1D2BQ9UPU7 963 aa10.55□□□□□ -0.72
ECHDC1-207ENST00000430841 ARFGEF2Q9Y6D5 1785 aa10.54□□□□□ -0.72
ECHDC1-207ENST00000430841 DEFB115Q30KQ5 88 aa10.54□□□□□ -0.72
ECHDC1-207ENST00000430841 FAM161AQ3B820 660 aa10.54□□□□□ -0.72
ECHDC1-207ENST00000430841 TMC2Q8TDI7 906 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms