RNA–Protein interactions for RNA: ENST00000429921.5

RPE-206, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-206ENST00000429921 SLC4A9Q96Q91 983 aa12.33□□□□□ -0.44
RPE-206ENST00000429921 ECHDC1Q9NTX5 307 aa12.33□□□□□ -0.44
RPE-206ENST00000429921 ROBO1Q9Y6N7 1651 aa12.32□□□□□ -0.44
RPE-206ENST00000429921 AFDNP55196 1824 aaKnown RBP12.32□□□□□ -0.44
RPE-206ENST00000429921 FAM177BA6PVY3 158 aa12.32□□□□□ -0.44
RPE-206ENST00000429921 MCM4P33991 863 aa12.32□□□□□ -0.44
RPE-206ENST00000429921 PTPN12Q05209 780 aaKnown RBP12.32□□□□□ -0.44
RPE-206ENST00000429921 CNTROBQ8N137 903 aa12.32□□□□□ -0.44
RPE-206ENST00000429921 PARP4Q9UKK3 1724 aaKnown RBP12.32□□□□□ -0.44
RPE-206ENST00000429921 PTH1RQ03431 593 aa12.32□□□□□ -0.44
RPE-206ENST00000429921 FAM89AQ96GI7 184 aa12.32□□□□□ -0.44
RPE-206ENST00000429921 SHANK3Q9BYB0 1731 aa12.31□□□□□ -0.44
RPE-206ENST00000429921 GLI3P10071 1580 aa12.31□□□□□ -0.44
RPE-206ENST00000429921 TUBGCP6Q96RT7 1819 aa12.31□□□□□ -0.44
RPE-206ENST00000429921 EXOC5O00471 708 aa12.31□□□□□ -0.44
RPE-206ENST00000429921 DDIT3P35638 169 aa12.31□□□□□ -0.44
RPE-206ENST00000429921 RFX5P48382 616 aaPredicted RBP12.31□□□□□ -0.44
RPE-206ENST00000429921 KCNQ4P56696 695 aa12.31□□□□□ -0.44
RPE-206ENST00000429921 HLFQ16534 295 aa12.31□□□□□ -0.44
RPE-206ENST00000429921 RASEFQ8IZ41 740 aa12.31□□□□□ -0.44
RPE-206ENST00000429921 KCPQ6ZWJ8 1503 aa12.31□□□□□ -0.44
RPE-206ENST00000429921 NHSL1Q5SYE7 1610 aa12.31□□□□□ -0.44
RPE-206ENST00000429921 TIMM10P62072 90 aa12.31□□□□□ -0.44
RPE-206ENST00000429921 FOXO4P98177 505 aa12.31□□□□□ -0.44
RPE-206ENST00000429921 COL9A3Q14050 684 aaPredicted RBP12.31□□□□□ -0.44
RPE-206ENST00000429921 FOXD4L6Q3SYB3 417 aaPredicted RBP12.31□□□□□ -0.44
RPE-206ENST00000429921 LRRC24Q50LG9 513 aa12.31□□□□□ -0.44
RPE-206ENST00000429921 FOXD4L3Q6VB84 417 aaPredicted RBP12.31□□□□□ -0.44
RPE-206ENST00000429921 NEUROD6Q96NK8 337 aa12.31□□□□□ -0.44
RPE-206ENST00000429921 PUS3Q9BZE2 481 aaKnown RBP12.31□□□□□ -0.44
RPE-206ENST00000429921 DIAPH3Q9NSV4 1193 aa12.31□□□□□ -0.44
RPE-206ENST00000429921 TBC1D2BQ9UPU7 963 aa12.31□□□□□ -0.44
RPE-206ENST00000429921 TOGARAM1Q9Y4F4 1720 aa12.31□□□□□ -0.44
RPE-206ENST00000429921 GLRX3O76003 335 aaKnown RBP12.3□□□□□ -0.44
RPE-206ENST00000429921 CASP7P55210 303 aa12.3□□□□□ -0.44
RPE-206ENST00000429921 SMIM5Q71RC9 77 aa12.3□□□□□ -0.44
RPE-206ENST00000429921 DNAJC2Q99543 621 aaKnown RBP12.3□□□□□ -0.44
RPE-206ENST00000429921 DBNDD2Q9BQY9 259 aa12.3□□□□□ -0.44
RPE-206ENST00000429921 CWC25Q9NXE8 425 aaPredicted RBP12.3□□□□□ -0.44
RPE-206ENST00000429921 ARFGEF2Q9Y6D5 1785 aa12.3□□□□□ -0.44
RPE-206ENST00000429921 SGSM2O43147 1006 aa12.29□□□□□ -0.44
RPE-206ENST00000429921 ST18O60284 1047 aa12.29□□□□□ -0.44
RPE-206ENST00000429921 ERC1Q8IUD2 1116 aa12.29□□□□□ -0.44
RPE-206ENST00000429921 DBNLQ9UJU6 430 aaKnown RBP12.29□□□□□ -0.44
RPE-206ENST00000429921 NMIQ13287 307 aaPredicted RBP12.29□□□□□ -0.44
RPE-206ENST00000429921 H7C1W4 665 aa12.28□□□□□ -0.44
RPE-206ENST00000429921 TPRNQ4KMQ1 711 aa12.28□□□□□ -0.44
RPE-206ENST00000429921 FAM182BQ5T319 152 aa12.28□□□□□ -0.44
RPE-206ENST00000429921 FSD1Q9BTV5 496 aa12.28□□□□□ -0.44
RPE-206ENST00000429921 LSG1Q9H089 658 aaKnown RBP12.28□□□□□ -0.44
RPE-206ENST00000429921 ZBTB1Q9Y2K1 713 aa12.28□□□□□ -0.44
RPE-206ENST00000429921 TNNI3KQ59H18 835 aa12.28□□□□□ -0.44
RPE-206ENST00000429921 PRPF40BQ6NWY9 871 aaKnown RBP12.28□□□□□ -0.44
RPE-206ENST00000429921 GPATCH3Q96I76 525 aa12.28□□□□□ -0.44
RPE-206ENST00000429921 SEC62Q99442 399 aaKnown RBP12.28□□□□□ -0.44
RPE-206ENST00000429921 HDAC5Q9UQL6 1122 aa12.28□□□□□ -0.44
RPE-206ENST00000429921 FPGT-TNNI3KV9GXZ4 949 aa12.28□□□□□ -0.44
RPE-206ENST00000429921 AOX1Q06278 1338 aa12.27□□□□□ -0.44
RPE-206ENST00000429921 TTC41PQ6P2S7 1318 aa12.27□□□□□ -0.44
RPE-206ENST00000429921 ABCC6O95255 1503 aa12.27□□□□□ -0.44
RPE-206ENST00000429921 A0A0D9SFI3 127 aa12.27□□□□□ -0.45
RPE-206ENST00000429921 MCCP23508 829 aa12.27□□□□□ -0.45
RPE-206ENST00000429921 CCDC129Q6ZRS4 1044 aa12.27□□□□□ -0.45
RPE-206ENST00000429921 KIAA1211Q6ZU35 1233 aa12.27□□□□□ -0.45
RPE-206ENST00000429921 DDX46Q7L014 1031 aaKnown RBP12.27□□□□□ -0.45
RPE-206ENST00000429921 TMX3Q96JJ7 454 aa12.27□□□□□ -0.45
RPE-206ENST00000429921 SNX14Q9Y5W7 946 aa12.27□□□□□ -0.45
RPE-206ENST00000429921 TAF6LQ9Y6J9 622 aa12.27□□□□□ -0.45
RPE-206ENST00000429921 KCNQ2O43526 872 aa12.27□□□□□ -0.45
RPE-206ENST00000429921 ADCK5Q3MIX3 580 aa12.27□□□□□ -0.45
RPE-206ENST00000429921 TCEANC2Q96MN5 208 aa12.27□□□□□ -0.45
RPE-206ENST00000429921 TRAK2O60296 914 aa12.26□□□□□ -0.45
RPE-206ENST00000429921 RAB3GAP1Q15042 981 aa12.26□□□□□ -0.45
RPE-206ENST00000429921 COPRSQ9NQ92 184 aa12.26□□□□□ -0.45
RPE-206ENST00000429921 HSPA4P34932 840 aa12.25□□□□□ -0.45
RPE-206ENST00000429921 KCNJ4P48050 445 aa12.25□□□□□ -0.45
RPE-206ENST00000429921 RABL6Q3YEC7 729 aaPredicted RBP12.25□□□□□ -0.45
RPE-206ENST00000429921 KIF6Q6ZMV9 814 aa12.25□□□□□ -0.45
RPE-206ENST00000429921 ATG9AQ7Z3C6 839 aa12.25□□□□□ -0.45
RPE-206ENST00000429921 ZNF589Q86UQ0 364 aaPredicted RBP12.25□□□□□ -0.45
RPE-206ENST00000429921 SNRKQ9NRH2 765 aa12.25□□□□□ -0.45
RPE-206ENST00000429921 BRPF3Q9ULD4 1205 aa12.25□□□□□ -0.45
RPE-206ENST00000429921 USP42Q9H9J4 1324 aaKnown RBP12.25□□□□□ -0.45
RPE-206ENST00000429921 TCIRG1Q13488 830 aa12.25□□□□□ -0.45
RPE-206ENST00000429921 DDB1Q16531 1140 aa12.25□□□□□ -0.45
RPE-206ENST00000429921 PTF1AQ7RTS3 328 aa12.25□□□□□ -0.45
RPE-206ENST00000429921 MARCH10Q8NA82 808 aaPredicted RBP12.25□□□□□ -0.45
RPE-206ENST00000429921 EVI5LQ96CN4 794 aa12.25□□□□□ -0.45
RPE-206ENST00000429921 C8orf37Q96NL8 207 aa12.25□□□□□ -0.45
RPE-206ENST00000429921 STARD3NLO95772 234 aa12.24□□□□□ -0.45
RPE-206ENST00000429921 CYP19A1P11511 503 aaPredicted RBP12.24□□□□□ -0.45
RPE-206ENST00000429921 CASTP20810 708 aaKnown RBP12.24□□□□□ -0.45
RPE-206ENST00000429921 FAM98CQ17RN3 349 aaKnown RBP12.24□□□□□ -0.45
RPE-206ENST00000429921 COL16A1Q07092 1604 aaPredicted RBP12.24□□□□□ -0.45
RPE-206ENST00000429921 LAMB4A4D0S4 1761 aa12.24□□□□□ -0.45
RPE-206ENST00000429921 UBR2Q8IWV8 1755 aa12.24□□□□□ -0.45
RPE-206ENST00000429921 ITGB4P16144 1822 aa12.24□□□□□ -0.45
RPE-206ENST00000429921 MCTP1Q6DN14 999 aa12.24□□□□□ -0.45
RPE-206ENST00000429921 ZDHHC9Q9Y397 364 aa12.24□□□□□ -0.45
RPE-206ENST00000429921 RAD50Q92878 1312 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms