RNA–Protein interactions for RNA: ENST00000428376.6

SFTPA1-203, Transcript of surfactant protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFTPA1, Length 2,141 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-203ENST00000428376 KCNQ4P56696 695 aa16.51■□□□□ 0.23
SFTPA1-203ENST00000428376 KIF1BPQ96EK5 621 aa16.51■□□□□ 0.23
SFTPA1-203ENST00000428376 BRWD3Q6RI45 1802 aa16.51■□□□□ 0.23
SFTPA1-203ENST00000428376 RPS6KA4O75676 772 aa16.51■□□□□ 0.23
SFTPA1-203ENST00000428376 BMP2KLQ5H9B9 411 aa16.51■□□□□ 0.23
SFTPA1-203ENST00000428376 ERC1Q8IUD2 1116 aa16.51■□□□□ 0.23
SFTPA1-203ENST00000428376 RHPN1Q8TCX5 695 aa16.51■□□□□ 0.23
SFTPA1-203ENST00000428376 PLA2G12BQ9BX93 195 aa16.5■□□□□ 0.23
SFTPA1-203ENST00000428376 LY75O60449 1722 aa16.5■□□□□ 0.23
SFTPA1-203ENST00000428376 GPTP24298 496 aa16.49■□□□□ 0.23
SFTPA1-203ENST00000428376 CLEC4GQ6UXB4 293 aa16.49■□□□□ 0.23
SFTPA1-203ENST00000428376 OSBPL3Q9H4L5 887 aa16.49■□□□□ 0.23
SFTPA1-203ENST00000428376 COPRSQ9NQ92 184 aa16.49■□□□□ 0.23
SFTPA1-203ENST00000428376 RGS17Q9UGC6 210 aaPredicted RBP16.49■□□□□ 0.23
SFTPA1-203ENST00000428376 CDHR2Q9BYE9 1310 aa16.49■□□□□ 0.23
SFTPA1-203ENST00000428376 RFX5P48382 616 aaPredicted RBP16.49■□□□□ 0.23
SFTPA1-203ENST00000428376 LMBR1LQ6UX01 489 aa16.49■□□□□ 0.23
SFTPA1-203ENST00000428376 PA2G4Q9UQ80 394 aaKnown RBP16.49■□□□□ 0.23
SFTPA1-203ENST00000428376 TRIM37O94972 964 aa16.48■□□□□ 0.23
SFTPA1-203ENST00000428376 G3BP1Q13283 466 aaKnown RBP eCLIP16.48■□□□□ 0.23
SFTPA1-203ENST00000428376 RTL5Q5HYW3 569 aaPredicted RBP16.48■□□□□ 0.23
SFTPA1-203ENST00000428376 OTUD7AQ8TE49 926 aaPredicted RBP16.48■□□□□ 0.23
SFTPA1-203ENST00000428376 ZNF652Q9Y2D9 606 aa16.48■□□□□ 0.23
SFTPA1-203ENST00000428376 SALL3Q9BXA9 1300 aa16.48■□□□□ 0.23
SFTPA1-203ENST00000428376 HMGB2P26583 209 aaKnown RBP16.48■□□□□ 0.23
SFTPA1-203ENST00000428376 OS9Q13438 667 aaPredicted RBP16.48■□□□□ 0.23
SFTPA1-203ENST00000428376 SLC27A3Q5K4L6 730 aa16.48■□□□□ 0.23
SFTPA1-203ENST00000428376 FAM89AQ96GI7 184 aa16.48■□□□□ 0.23
SFTPA1-203ENST00000428376 PARP10Q53GL7 1025 aa16.47■□□□□ 0.23
SFTPA1-203ENST00000428376 NUP98P52948 1817 aa16.47■□□□□ 0.23
SFTPA1-203ENST00000428376 PDE1AP54750 535 aa16.46■□□□□ 0.23
SFTPA1-203ENST00000428376 PTPN12Q05209 780 aaKnown RBP16.46■□□□□ 0.23
SFTPA1-203ENST00000428376 STAP2Q9UGK3 403 aa16.46■□□□□ 0.23
SFTPA1-203ENST00000428376 TRMT112Q9UI30 125 aaKnown RBP16.46■□□□□ 0.23
SFTPA1-203ENST00000428376 RTCBQ9Y3I0 505 aaKnown RBP16.46■□□□□ 0.23
SFTPA1-203ENST00000428376 UBN2Q6ZU65 1347 aa16.46■□□□□ 0.23
SFTPA1-203ENST00000428376 TTC22Q5TAA0 569 aa16.46■□□□□ 0.23
SFTPA1-203ENST00000428376 LRRC4BQ9NT99 713 aa16.46■□□□□ 0.23
SFTPA1-203ENST00000428376 ANKRD36CQ5JPF3 1778 aa16.46■□□□□ 0.22
SFTPA1-203ENST00000428376 GNPATO15228 680 aa16.45■□□□□ 0.22
SFTPA1-203ENST00000428376 CSF1RP07333 972 aa16.45■□□□□ 0.22
SFTPA1-203ENST00000428376 POTEAQ6S8J7 498 aa16.45■□□□□ 0.22
SFTPA1-203ENST00000428376 AK7Q96M32 723 aa16.45■□□□□ 0.22
SFTPA1-203ENST00000428376 BCL11AQ9H165 835 aa16.45■□□□□ 0.22
SFTPA1-203ENST00000428376 IL1RAPL2Q9NP60 686 aa16.45■□□□□ 0.22
SFTPA1-203ENST00000428376 NARFQ9UHQ1 456 aa16.45■□□□□ 0.22
SFTPA1-203ENST00000428376 SASH1O94885 1247 aa16.44■□□□□ 0.22
SFTPA1-203ENST00000428376 MX1P20591 662 aa16.44■□□□□ 0.22
SFTPA1-203ENST00000428376 SUSD4Q5VX71 490 aa16.44■□□□□ 0.22
SFTPA1-203ENST00000428376 CLASRPQ8N2M8 674 aaKnown RBP16.44■□□□□ 0.22
SFTPA1-203ENST00000428376 UTP14AQ9BVJ6 771 aaKnown RBP16.44■□□□□ 0.22
SFTPA1-203ENST00000428376 AOX1Q06278 1338 aa16.44■□□□□ 0.22
SFTPA1-203ENST00000428376 IRS4O14654 1257 aaPredicted RBP16.43■□□□□ 0.22
SFTPA1-203ENST00000428376 GSPT1P15170 499 aaKnown RBP16.43■□□□□ 0.22
SFTPA1-203ENST00000428376 KLHDC4Q8TBB5 520 aa16.43■□□□□ 0.22
SFTPA1-203ENST00000428376 NIP7Q9Y221 180 aaKnown RBP eCLIP16.43■□□□□ 0.22
SFTPA1-203ENST00000428376 CHMP3Q9Y3E7 222 aa16.43■□□□□ 0.22
SFTPA1-203ENST00000428376 PLSCR1O15162 318 aa16.43■□□□□ 0.22
SFTPA1-203ENST00000428376 SYNE4Q8N205 404 aa16.43■□□□□ 0.22
SFTPA1-203ENST00000428376 TAF1LQ8IZX4 1826 aa16.42■□□□□ 0.22
SFTPA1-203ENST00000428376 PDE8AO60658 829 aa16.42■□□□□ 0.22
SFTPA1-203ENST00000428376 SIL1Q9H173 461 aa16.42■□□□□ 0.22
SFTPA1-203ENST00000428376 SH3TC1Q8TE82 1336 aa16.42■□□□□ 0.22
SFTPA1-203ENST00000428376 ZPR1O75312 459 aa16.42■□□□□ 0.22
SFTPA1-203ENST00000428376 HSP90B1P14625 803 aaKnown RBP16.42■□□□□ 0.22
SFTPA1-203ENST00000428376 ADRA2BP18089 450 aa16.42■□□□□ 0.22
SFTPA1-203ENST00000428376 TRAPPC3LQ5T215 181 aa16.42■□□□□ 0.22
SFTPA1-203ENST00000428376 ARHGEF1Q92888 912 aaKnown RBP16.42■□□□□ 0.22
SFTPA1-203ENST00000428376 C4BP0C0L5 1744 aa16.41■□□□□ 0.22
SFTPA1-203ENST00000428376 CCDC57Q2TAC2 916 aa16.41■□□□□ 0.22
SFTPA1-203ENST00000428376 NUTM1Q86Y26 1132 aa16.41■□□□□ 0.22
SFTPA1-203ENST00000428376 TTLL11Q8NHH1 800 aa16.41■□□□□ 0.22
SFTPA1-203ENST00000428376 BCL2L12Q9HB09 334 aa16.41■□□□□ 0.22
SFTPA1-203ENST00000428376 FBXO3Q9UK99 471 aa16.41■□□□□ 0.22
SFTPA1-203ENST00000428376 USP42Q9H9J4 1324 aaKnown RBP16.41■□□□□ 0.22
SFTPA1-203ENST00000428376 BCORQ6W2J9 1755 aa16.41■□□□□ 0.22
SFTPA1-203ENST00000428376 NTSR2O95665 410 aa16.4■□□□□ 0.22
SFTPA1-203ENST00000428376 CTSWP56202 376 aa16.4■□□□□ 0.22
SFTPA1-203ENST00000428376 TXNRD1Q16881 649 aa16.4■□□□□ 0.22
SFTPA1-203ENST00000428376 USPL1Q5W0Q7 1092 aa16.4■□□□□ 0.22
SFTPA1-203ENST00000428376 PROM2Q8N271 834 aa16.4■□□□□ 0.22
SFTPA1-203ENST00000428376 CIAO1O76071 339 aa16.4■□□□□ 0.22
SFTPA1-203ENST00000428376 SMIM5Q71RC9 77 aa16.4■□□□□ 0.22
SFTPA1-203ENST00000428376 SEC24BO95487 1268 aa16.39■□□□□ 0.21
SFTPA1-203ENST00000428376 IFIT2P09913 472 aaKnown RBP16.39■□□□□ 0.21
SFTPA1-203ENST00000428376 IL15P40933 162 aaPredicted RBP16.39■□□□□ 0.21
SFTPA1-203ENST00000428376 IFIT5Q13325 482 aaKnown RBP16.39■□□□□ 0.21
SFTPA1-203ENST00000428376 AMIGO3Q86WK7 504 aa16.39■□□□□ 0.21
SFTPA1-203ENST00000428376 TTC41PQ6P2S7 1318 aa16.39■□□□□ 0.21
SFTPA1-203ENST00000428376 EYA2O00167 538 aa16.39■□□□□ 0.21
SFTPA1-203ENST00000428376 APBA3O96018 575 aa16.39■□□□□ 0.21
SFTPA1-203ENST00000428376 SDSP20132 328 aa16.39■□□□□ 0.21
SFTPA1-203ENST00000428376 RFC4P35249 363 aa16.39■□□□□ 0.21
SFTPA1-203ENST00000428376 ATG9AQ7Z3C6 839 aa16.39■□□□□ 0.21
SFTPA1-203ENST00000428376 SRP68Q9UHB9 627 aaKnown RBP16.39■□□□□ 0.21
SFTPA1-203ENST00000428376 CDC45O75419 566 aa16.38■□□□□ 0.21
SFTPA1-203ENST00000428376 AACSQ86V21 672 aa16.38■□□□□ 0.21
SFTPA1-203ENST00000428376 EAF2Q96CJ1 260 aaPredicted RBP16.38■□□□□ 0.21
SFTPA1-203ENST00000428376 TFCP2Q12800 502 aa16.37■□□□□ 0.21
SFTPA1-203ENST00000428376 TBC1D9BQ66K14 1250 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms