RNA–Protein interactions for RNA: ENST00000428083.1

RHOA-IT1-201, RHOA intronic transcript 1, humanhuman

TSL 3 BASIC

Gene RHOA-IT1, Length 517 nt, Biotype sense intronic, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOA-IT1-201ENST00000428083 PRPF40BQ6NWY9 871 aaKnown RBP13.66□□□□□ -0.22
RHOA-IT1-201ENST00000428083 TSPYL6Q8N831 410 aa13.66□□□□□ -0.22
RHOA-IT1-201ENST00000428083 NECTIN2Q92692 538 aa13.66□□□□□ -0.22
RHOA-IT1-201ENST00000428083 TSR2Q969E8 191 aaKnown RBP13.66□□□□□ -0.22
RHOA-IT1-201ENST00000428083 SH3TC1Q8TE82 1336 aa13.65□□□□□ -0.22
RHOA-IT1-201ENST00000428083 ELL2O00472 640 aaPredicted RBP13.65□□□□□ -0.22
RHOA-IT1-201ENST00000428083 VAMP4O75379 141 aa13.65□□□□□ -0.22
RHOA-IT1-201ENST00000428083 GPTP24298 496 aa13.65□□□□□ -0.22
RHOA-IT1-201ENST00000428083 RTKN2Q8IZC4 609 aa13.65□□□□□ -0.22
RHOA-IT1-201ENST00000428083 CCDC191Q8NCU4 936 aa13.65□□□□□ -0.22
RHOA-IT1-201ENST00000428083 ZNF428Q96B54 188 aa13.65□□□□□ -0.22
RHOA-IT1-201ENST00000428083 KSR2Q6VAB6 950 aa13.64□□□□□ -0.23
RHOA-IT1-201ENST00000428083 TMC4Q7Z404 712 aa13.64□□□□□ -0.23
RHOA-IT1-201ENST00000428083 RIC3Q7Z5B4 369 aa13.64□□□□□ -0.23
RHOA-IT1-201ENST00000428083 RBM17Q96I25 401 aaKnown RBP13.64□□□□□ -0.23
RHOA-IT1-201ENST00000428083 METTL22Q9BUU2 404 aaPredicted RBP13.64□□□□□ -0.23
RHOA-IT1-201ENST00000428083 E9PSI1 815 aa13.63□□□□□ -0.23
RHOA-IT1-201ENST00000428083 C21orf2O43822 256 aa13.63□□□□□ -0.23
RHOA-IT1-201ENST00000428083 BBOX1O75936 387 aa13.63□□□□□ -0.23
RHOA-IT1-201ENST00000428083 CCDC93Q567U6 631 aa13.63□□□□□ -0.23
RHOA-IT1-201ENST00000428083 C9orf131Q5VYM1 1079 aa13.63□□□□□ -0.23
RHOA-IT1-201ENST00000428083 NUTM1Q86Y26 1132 aa13.63□□□□□ -0.23
RHOA-IT1-201ENST00000428083 CCDC24Q8N4L8 307 aa13.63□□□□□ -0.23
RHOA-IT1-201ENST00000428083 RPGRQ92834 1020 aaKnown RBP13.63□□□□□ -0.23
RHOA-IT1-201ENST00000428083 VPS33BQ9H267 617 aa13.63□□□□□ -0.23
RHOA-IT1-201ENST00000428083 PHAXQ9H814 394 aaKnown RBP13.63□□□□□ -0.23
RHOA-IT1-201ENST00000428083 TRMT112Q9UI30 125 aaKnown RBP13.63□□□□□ -0.23
RHOA-IT1-201ENST00000428083 WWC3Q9ULE0 1092 aa13.63□□□□□ -0.23
RHOA-IT1-201ENST00000428083 ARFGEF2Q9Y6D5 1785 aa13.63□□□□□ -0.23
RHOA-IT1-201ENST00000428083 ABCC12Q96J65 1359 aa13.62□□□□□ -0.23
RHOA-IT1-201ENST00000428083 NFKBIEO00221 500 aa13.62□□□□□ -0.23
RHOA-IT1-201ENST00000428083 SLC4A2P04920 1241 aa13.62□□□□□ -0.23
RHOA-IT1-201ENST00000428083 SF3B3Q15393 1217 aaKnown RBP13.62□□□□□ -0.23
RHOA-IT1-201ENST00000428083 ZBTB38Q8NAP3 1195 aaPredicted RBP13.62□□□□□ -0.23
RHOA-IT1-201ENST00000428083 PSMD1Q99460 953 aa13.62□□□□□ -0.23
RHOA-IT1-201ENST00000428083 TAOK3Q9H2K8 898 aa13.62□□□□□ -0.23
RHOA-IT1-201ENST00000428083 GPBP1L1Q9HC44 474 aaPredicted RBP13.62□□□□□ -0.23
RHOA-IT1-201ENST00000428083 ANKRD36CQ5JPF3 1778 aa13.61□□□□□ -0.23
RHOA-IT1-201ENST00000428083 FAM177BA6PVY3 158 aa13.61□□□□□ -0.23
RHOA-IT1-201ENST00000428083 EXOSC9Q06265 439 aaKnown RBP13.61□□□□□ -0.23
RHOA-IT1-201ENST00000428083 COL11A2P13942 1736 aaPredicted RBP13.61□□□□□ -0.23
RHOA-IT1-201ENST00000428083 KDM2BQ8NHM5 1336 aa13.61□□□□□ -0.23
RHOA-IT1-201ENST00000428083 CACNA1FO60840 1977 aa13.6□□□□□ -0.23
RHOA-IT1-201ENST00000428083 PI4KAP2A4QPH2 592 aa13.6□□□□□ -0.23
RHOA-IT1-201ENST00000428083 PCCAP05165 728 aaPredicted RBP13.6□□□□□ -0.23
RHOA-IT1-201ENST00000428083 CT47B1P0C2W7 299 aaPredicted RBP13.6□□□□□ -0.23
RHOA-IT1-201ENST00000428083 FKBP4Q02790 459 aaKnown RBP eCLIP13.6□□□□□ -0.23
RHOA-IT1-201ENST00000428083 NEXNQ0ZGT2 675 aa13.6□□□□□ -0.23
RHOA-IT1-201ENST00000428083 DIEXFQ68CQ4 756 aaKnown RBP13.6□□□□□ -0.23
RHOA-IT1-201ENST00000428083 TRMT2AQ8IZ69 625 aaKnown RBP13.6□□□□□ -0.23
RHOA-IT1-201ENST00000428083 PI4KAP1Q8N8J0 262 aa13.6□□□□□ -0.23
RHOA-IT1-201ENST00000428083 SPINK5Q9NQ38 1064 aaPredicted RBP13.6□□□□□ -0.23
RHOA-IT1-201ENST00000428083 RNF181Q9P0P0 153 aa13.6□□□□□ -0.23
RHOA-IT1-201ENST00000428083 SNED1Q8TER0 1413 aa13.59□□□□□ -0.23
RHOA-IT1-201ENST00000428083 FLIIQ13045 1269 aa13.59□□□□□ -0.23
RHOA-IT1-201ENST00000428083 TMX4Q9H1E5 349 aaPredicted RBP13.59□□□□□ -0.23
RHOA-IT1-201ENST00000428083 CWC25Q9NXE8 425 aaPredicted RBP13.59□□□□□ -0.23
RHOA-IT1-201ENST00000428083 ATP6V0A2Q9Y487 856 aa13.59□□□□□ -0.23
RHOA-IT1-201ENST00000428083 CDHR2Q9BYE9 1310 aa13.59□□□□□ -0.23
RHOA-IT1-201ENST00000428083 FER1L6Q2WGJ9 1857 aa13.59□□□□□ -0.23
RHOA-IT1-201ENST00000428083 SLX4Q8IY92 1834 aa13.58□□□□□ -0.24
RHOA-IT1-201ENST00000428083 GLTPD2A6NH11 291 aa13.58□□□□□ -0.24
RHOA-IT1-201ENST00000428083 SLFN5Q08AF3 891 aa13.58□□□□□ -0.24
RHOA-IT1-201ENST00000428083 DPY19L2Q6NUT2 758 aa13.58□□□□□ -0.24
RHOA-IT1-201ENST00000428083 SP8Q8IXZ3 490 aa13.58□□□□□ -0.24
RHOA-IT1-201ENST00000428083 MAP3K2Q9Y2U5 619 aa13.58□□□□□ -0.24
RHOA-IT1-201ENST00000428083 SALL2Q9Y467 1007 aaPredicted RBP13.58□□□□□ -0.24
RHOA-IT1-201ENST00000428083 SBF1O95248 1867 aa13.58□□□□□ -0.24
RHOA-IT1-201ENST00000428083 ATP5J2-PTCD1G3V325 749 aa13.57□□□□□ -0.24
RHOA-IT1-201ENST00000428083 PRELPP51888 382 aa13.57□□□□□ -0.24
RHOA-IT1-201ENST00000428083 DDX46Q7L014 1031 aaKnown RBP13.57□□□□□ -0.24
RHOA-IT1-201ENST00000428083 LINS1Q8NG48 757 aa13.57□□□□□ -0.24
RHOA-IT1-201ENST00000428083 FAM89AQ96GI7 184 aa13.57□□□□□ -0.24
RHOA-IT1-201ENST00000428083 RTFDC1Q9BY42 306 aaPredicted RBP13.57□□□□□ -0.24
RHOA-IT1-201ENST00000428083 IRS4O14654 1257 aaPredicted RBP13.56□□□□□ -0.24
RHOA-IT1-201ENST00000428083 PPEF1O14829 653 aaPredicted RBP13.56□□□□□ -0.24
RHOA-IT1-201ENST00000428083 C1QTNF8P60827 252 aa13.56□□□□□ -0.24
RHOA-IT1-201ENST00000428083 GRAPQ13588 217 aa13.56□□□□□ -0.24
RHOA-IT1-201ENST00000428083 SUPT20HQ8NEM7 779 aa13.56□□□□□ -0.24
RHOA-IT1-201ENST00000428083 GRAPLQ8TC17 118 aaPredicted RBP13.56□□□□□ -0.24
RHOA-IT1-201ENST00000428083 MYD88Q99836 296 aa13.56□□□□□ -0.24
RHOA-IT1-201ENST00000428083 TNRC6CQ9HCJ0 1690 aaKnown RBP13.56□□□□□ -0.24
RHOA-IT1-201ENST00000428083 NEURL1BA8MQ27 555 aa13.55□□□□□ -0.24
RHOA-IT1-201ENST00000428083 H7C1W4 665 aa13.55□□□□□ -0.24
RHOA-IT1-201ENST00000428083 KIF3CO14782 793 aa13.55□□□□□ -0.24
RHOA-IT1-201ENST00000428083 PDE8AO60658 829 aa13.55□□□□□ -0.24
RHOA-IT1-201ENST00000428083 TOMM70O94826 608 aa13.55□□□□□ -0.24
RHOA-IT1-201ENST00000428083 IGKV5-2P06315 115 aa13.55□□□□□ -0.24
RHOA-IT1-201ENST00000428083 HCLS1P14317 486 aaPredicted RBP13.55□□□□□ -0.24
RHOA-IT1-201ENST00000428083 RASSF7Q02833 373 aa13.55□□□□□ -0.24
RHOA-IT1-201ENST00000428083 C3orf67Q6ZVT6 689 aa13.55□□□□□ -0.24
RHOA-IT1-201ENST00000428083 DNAAF4Q8WXU2 420 aa13.55□□□□□ -0.24
RHOA-IT1-201ENST00000428083 PLA2G12BQ9BX93 195 aa13.55□□□□□ -0.24
RHOA-IT1-201ENST00000428083 ABCC4O15439 1325 aa13.55□□□□□ -0.24
RHOA-IT1-201ENST00000428083 BRPF1P55201 1214 aaPredicted RBP13.54□□□□□ -0.24
RHOA-IT1-201ENST00000428083 FKBP5Q13451 457 aaPredicted RBP13.54□□□□□ -0.24
RHOA-IT1-201ENST00000428083 ALDH1L2Q3SY69 923 aa13.54□□□□□ -0.24
RHOA-IT1-201ENST00000428083 G2E3Q7L622 706 aa13.54□□□□□ -0.24
RHOA-IT1-201ENST00000428083 SYNE4Q8N205 404 aa13.54□□□□□ -0.24
RHOA-IT1-201ENST00000428083 RTL9Q8NET4 1388 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms