RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 SIK1P57059 783 aa32.63■■■□□ 2.81
SH3GL3-202ENST00000427482 GIGYF2Q6Y7W6 1299 aaKnown RBP32.63■■■□□ 2.81
SH3GL3-202ENST00000427482 KLHDC4Q8TBB5 520 aa32.62■■■□□ 2.81
SH3GL3-202ENST00000427482 SMARCC1Q92922 1105 aaPredicted RBP32.62■■■□□ 2.81
SH3GL3-202ENST00000427482 TTC41PQ6P2S7 1318 aa32.62■■■□□ 2.81
SH3GL3-202ENST00000427482 MEX3CQ5U5Q3 659 aaKnown RBP32.61■■■□□ 2.81
SH3GL3-202ENST00000427482 MYH14Q7Z406 1995 aaKnown RBP32.61■■■□□ 2.81
SH3GL3-202ENST00000427482 KCNQ2O43526 872 aa32.61■■■□□ 2.81
SH3GL3-202ENST00000427482 ATP6V1AP38606 617 aa32.61■■■□□ 2.81
SH3GL3-202ENST00000427482 PTPN12Q05209 780 aaKnown RBP32.61■■■□□ 2.81
SH3GL3-202ENST00000427482 BECN1Q14457 450 aa32.61■■■□□ 2.81
SH3GL3-202ENST00000427482 LMBR1LQ6UX01 489 aa32.61■■■□□ 2.81
SH3GL3-202ENST00000427482 SIL1Q9H173 461 aa32.61■■■□□ 2.81
SH3GL3-202ENST00000427482 TRIM6-TRIM34B2RNG4 842 aa32.58■■■□□ 2.81
SH3GL3-202ENST00000427482 HSP90AB3PQ58FF7 597 aa32.58■■■□□ 2.81
SH3GL3-202ENST00000427482 RTL5Q5HYW3 569 aaPredicted RBP32.58■■■□□ 2.81
SH3GL3-202ENST00000427482 ARXQ96QS3 562 aa32.58■■■□□ 2.81
SH3GL3-202ENST00000427482 CCDC87Q9NVE4 849 aa32.58■■■□□ 2.81
SH3GL3-202ENST00000427482 MYT1Q01538 1121 aa32.58■■■□□ 2.81
SH3GL3-202ENST00000427482 HLFQ16534 295 aa32.58■■■□□ 2.81
SH3GL3-202ENST00000427482 INTS5Q6P9B9 1019 aaKnown RBP32.58■■■□□ 2.81
SH3GL3-202ENST00000427482 NHSQ6T4R5 1651 aa32.57■■■□□ 2.8
SH3GL3-202ENST00000427482 IFIT2P09913 472 aaKnown RBP32.57■■■□□ 2.8
SH3GL3-202ENST00000427482 ITPK1Q13572 414 aa32.57■■■□□ 2.8
SH3GL3-202ENST00000427482 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP32.57■■■□□ 2.8
SH3GL3-202ENST00000427482 ERVV-1B6SEH8 477 aa32.56■■■□□ 2.8
SH3GL3-202ENST00000427482 AACSQ86V21 672 aa32.56■■■□□ 2.8
SH3GL3-202ENST00000427482 RILPL2Q969X0 211 aa32.56■■■□□ 2.8
SH3GL3-202ENST00000427482 PCCAP05165 728 aaPredicted RBP32.56■■■□□ 2.8
SH3GL3-202ENST00000427482 CRKLP46109 303 aaKnown RBP32.56■■■□□ 2.8
SH3GL3-202ENST00000427482 EIF5P55010 431 aaKnown RBP32.56■■■□□ 2.8
SH3GL3-202ENST00000427482 AFF2P51816 1311 aa32.55■■■□□ 2.8
SH3GL3-202ENST00000427482 BTAF1O14981 1849 aa32.55■■■□□ 2.8
SH3GL3-202ENST00000427482 DZIP3Q86Y13 1208 aaKnown RBP32.55■■■□□ 2.8
SH3GL3-202ENST00000427482 GPATCH3Q96I76 525 aa32.55■■■□□ 2.8
SH3GL3-202ENST00000427482 GLRX3O76003 335 aaKnown RBP32.54■■■□□ 2.8
SH3GL3-202ENST00000427482 EAF2Q96CJ1 260 aaPredicted RBP32.54■■■□□ 2.8
SH3GL3-202ENST00000427482 ECHDC1Q9NTX5 307 aa32.54■■■□□ 2.8
SH3GL3-202ENST00000427482 ERC2O15083 957 aa32.54■■■□□ 2.8
SH3GL3-202ENST00000427482 GJD4Q96KN9 370 aaPredicted RBP32.54■■■□□ 2.8
SH3GL3-202ENST00000427482 MYH3P11055 1940 aa32.53■■■□□ 2.8
SH3GL3-202ENST00000427482 ATRNO75882 1429 aa32.53■■■□□ 2.8
SH3GL3-202ENST00000427482 ANP32EQ9BTT0 268 aa32.53■■■□□ 2.8
SH3GL3-202ENST00000427482 CHMLP26374 656 aa32.52■■■□□ 2.8
SH3GL3-202ENST00000427482 NLRP10Q86W26 655 aa32.52■■■□□ 2.8
SH3GL3-202ENST00000427482 ZBTB38Q8NAP3 1195 aaPredicted RBP32.52■■■□□ 2.8
SH3GL3-202ENST00000427482 USP26Q9BXU7 913 aa32.52■■■□□ 2.8
SH3GL3-202ENST00000427482 CHMP3Q9Y3E7 222 aa32.52■■■□□ 2.8
SH3GL3-202ENST00000427482 REC8O95072 547 aa32.51■■■□□ 2.8
SH3GL3-202ENST00000427482 KIF2CQ99661 725 aa32.51■■■□□ 2.8
SH3GL3-202ENST00000427482 PLA2G12BQ9BX93 195 aa32.51■■■□□ 2.8
SH3GL3-202ENST00000427482 TBC1D2BQ9UPU7 963 aa32.51■■■□□ 2.8
SH3GL3-202ENST00000427482 TBC1D2Q9BYX2 928 aa32.51■■■□□ 2.79
SH3GL3-202ENST00000427482 CDHR2Q9BYE9 1310 aa32.5■■■□□ 2.79
SH3GL3-202ENST00000427482 SBF2Q86WG5 1849 aa32.5■■■□□ 2.79
SH3GL3-202ENST00000427482 ESYT1Q9BSJ8 1104 aa32.49■■■□□ 2.79
SH3GL3-202ENST00000427482 GPTP24298 496 aa32.49■■■□□ 2.79
SH3GL3-202ENST00000427482 CNTROBQ8N137 903 aa32.49■■■□□ 2.79
SH3GL3-202ENST00000427482 FAM89AQ96GI7 184 aa32.48■■■□□ 2.79
SH3GL3-202ENST00000427482 CCDC8Q9H0W5 538 aaPredicted RBP32.48■■■□□ 2.79
SH3GL3-202ENST00000427482 BCORQ6W2J9 1755 aa32.47■■■□□ 2.79
SH3GL3-202ENST00000427482 MAP4K4O95819 1239 aaPredicted RBP32.47■■■□□ 2.79
SH3GL3-202ENST00000427482 TFCP2Q12800 502 aa32.47■■■□□ 2.79
SH3GL3-202ENST00000427482 TLR7Q9NYK1 1049 aaKnown RBP32.46■■■□□ 2.79
SH3GL3-202ENST00000427482 ZNF34Q8IZ26 560 aa32.45■■■□□ 2.79
SH3GL3-202ENST00000427482 TRPC5Q9UL62 973 aaPredicted RBP32.45■■■□□ 2.79
SH3GL3-202ENST00000427482 TNNI3KQ59H18 835 aa32.44■■■□□ 2.78
SH3GL3-202ENST00000427482 FPGT-TNNI3KV9GXZ4 949 aa32.44■■■□□ 2.78
SH3GL3-202ENST00000427482 ONECUT3O60422 494 aaPredicted RBP32.44■■■□□ 2.78
SH3GL3-202ENST00000427482 ATG9AQ7Z3C6 839 aa32.44■■■□□ 2.78
SH3GL3-202ENST00000427482 PTF1AQ7RTS3 328 aa32.43■■■□□ 2.78
SH3GL3-202ENST00000427482 UBN2Q6ZU65 1347 aa32.43■■■□□ 2.78
SH3GL3-202ENST00000427482 CSF1RP07333 972 aa32.42■■■□□ 2.78
SH3GL3-202ENST00000427482 SNX21Q969T3 373 aa32.42■■■□□ 2.78
SH3GL3-202ENST00000427482 CIAO1O76071 339 aa32.41■■■□□ 2.78
SH3GL3-202ENST00000427482 CAMTA2O94983 1202 aa32.41■■■□□ 2.78
SH3GL3-202ENST00000427482 IL15P40933 162 aaPredicted RBP32.41■■■□□ 2.78
SH3GL3-202ENST00000427482 LINC00116Q8NCU8 138 aa32.41■■■□□ 2.78
SH3GL3-202ENST00000427482 LY75O60449 1722 aa32.41■■■□□ 2.78
SH3GL3-202ENST00000427482 EYA2O00167 538 aa32.4■■■□□ 2.78
SH3GL3-202ENST00000427482 CCDC57Q2TAC2 916 aa32.4■■■□□ 2.78
SH3GL3-202ENST00000427482 SYNE4Q8N205 404 aa32.4■■■□□ 2.78
SH3GL3-202ENST00000427482 ZNF594Q96JF6 807 aaPredicted RBP32.4■■■□□ 2.78
SH3GL3-202ENST00000427482 TRMT112Q9UI30 125 aaKnown RBP32.4■■■□□ 2.78
SH3GL3-202ENST00000427482 DBNLQ9UJU6 430 aaKnown RBP32.39■■■□□ 2.78
SH3GL3-202ENST00000427482 HSCBQ8IWL3 235 aa32.38■■■□□ 2.77
SH3GL3-202ENST00000427482 EVI5LQ96CN4 794 aa32.38■■■□□ 2.77
SH3GL3-202ENST00000427482 GPR108Q9NPR9 543 aa32.38■■■□□ 2.77
SH3GL3-202ENST00000427482 CNTNAP4Q9C0A0 1308 aa32.38■■■□□ 2.77
SH3GL3-202ENST00000427482 FAM182BQ5T319 152 aa32.37■■■□□ 2.77
SH3GL3-202ENST00000427482 FBXO3Q9UK99 471 aa32.37■■■□□ 2.77
SH3GL3-202ENST00000427482 TAF1LQ8IZX4 1826 aa32.36■■■□□ 2.77
SH3GL3-202ENST00000427482 IRS4O14654 1257 aaPredicted RBP32.36■■■□□ 2.77
SH3GL3-202ENST00000427482 LRRC24Q50LG9 513 aa32.36■■■□□ 2.77
SH3GL3-202ENST00000427482 LAMB2P55268 1798 aa32.36■■■□□ 2.77
SH3GL3-202ENST00000427482 CTSWP56202 376 aa32.35■■■□□ 2.77
SH3GL3-202ENST00000427482 SEPT12Q8IYM1 358 aa32.35■■■□□ 2.77
SH3GL3-202ENST00000427482 SCN7AQ01118 1682 aa32.34■■■□□ 2.77
SH3GL3-202ENST00000427482 ZNF609O15014 1411 aa32.34■■■□□ 2.77
SH3GL3-202ENST00000427482 DDX60Q8IY21 1712 aaKnown RBP32.34■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms