RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 FUCA2Q9BTY2 467 aa8.85□□□□□ -0.99
LINC01108-201ENST00000427276 HOMER1Q86YM7 354 aa8.84□□□□□ -0.99
LINC01108-201ENST00000427276 FAM177A1Q8N128 213 aaPredicted RBP8.84□□□□□ -0.99
LINC01108-201ENST00000427276 ANKRD7Q92527 254 aa8.84□□□□□ -0.99
LINC01108-201ENST00000427276 GPATCH3Q96I76 525 aa8.84□□□□□ -0.99
LINC01108-201ENST00000427276 ZSCAN31Q96LW9 406 aaPredicted RBP8.84□□□□□ -0.99
LINC01108-201ENST00000427276 FEZ1Q99689 392 aa8.84□□□□□ -0.99
LINC01108-201ENST00000427276 SIGLEC1Q9BZZ2 1709 aa8.84□□□□□ -0.99
LINC01108-201ENST00000427276 JAK2O60674 1132 aa8.84□□□□□ -0.99
LINC01108-201ENST00000427276 GLRX3O76003 335 aaKnown RBP8.84□□□□□ -0.99
LINC01108-201ENST00000427276 GTF3C6Q969F1 213 aa8.84□□□□□ -0.99
LINC01108-201ENST00000427276 STAP2Q9UGK3 403 aa8.84□□□□□ -0.99
LINC01108-201ENST00000427276 NEXMIFQ5QGS0 1516 aa8.84□□□□□ -0.99
LINC01108-201ENST00000427276 PLCD3Q8N3E9 789 aa8.83□□□□□ -1
LINC01108-201ENST00000427276 PI4K2BQ8TCG2 481 aa8.83□□□□□ -1
LINC01108-201ENST00000427276 SH2B1Q9NRF2 756 aaPredicted RBP8.83□□□□□ -1
LINC01108-201ENST00000427276 CTNNA3Q9UI47 895 aa8.83□□□□□ -1
LINC01108-201ENST00000427276 NDUFB9Q9Y6M9 179 aa8.83□□□□□ -1
LINC01108-201ENST00000427276 ACEP12821 1306 aa8.83□□□□□ -1
LINC01108-201ENST00000427276 POLR3GO15318 223 aaPredicted RBP8.83□□□□□ -1
LINC01108-201ENST00000427276 SMC2O95347 1197 aa8.83□□□□□ -1
LINC01108-201ENST00000427276 PDCP20941 246 aa8.83□□□□□ -1
LINC01108-201ENST00000427276 CREB3L3Q68CJ9 461 aa8.83□□□□□ -1
LINC01108-201ENST00000427276 ISM2Q6H9L7 571 aa8.83□□□□□ -1
LINC01108-201ENST00000427276 KRT222Q8N1A0 295 aa8.83□□□□□ -1
LINC01108-201ENST00000427276 TMX1Q9H3N1 280 aa8.83□□□□□ -1
LINC01108-201ENST00000427276 SALL3Q9BXA9 1300 aa8.83□□□□□ -1
LINC01108-201ENST00000427276 LEO1Q8WVC0 666 aaPredicted RBP8.83□□□□□ -1
LINC01108-201ENST00000427276 EYA1Q99502 592 aa8.83□□□□□ -1
LINC01108-201ENST00000427276 FTOQ9C0B1 505 aaKnown RBP eCLIP8.83□□□□□ -1
LINC01108-201ENST00000427276 SCAND2PQ9GZW5 306 aaPredicted RBP8.83□□□□□ -1
LINC01108-201ENST00000427276 PAXBP1Q9Y5B6 917 aa8.83□□□□□ -1
LINC01108-201ENST00000427276 KIAA0232Q92628 1395 aa8.83□□□□□ -1
LINC01108-201ENST00000427276 CCDC69A6NI79 296 aa8.82□□□□□ -1
LINC01108-201ENST00000427276 GNAT3A8MTJ3 354 aa8.82□□□□□ -1
LINC01108-201ENST00000427276 BIN1O00499 593 aa8.82□□□□□ -1
LINC01108-201ENST00000427276 NMIQ13287 307 aaPredicted RBP8.82□□□□□ -1
LINC01108-201ENST00000427276 VPS53Q5VIR6 699 aa8.82□□□□□ -1
LINC01108-201ENST00000427276 EDC3Q96F86 508 aaKnown RBP8.82□□□□□ -1
LINC01108-201ENST00000427276 SDF4Q9BRK5 362 aa8.82□□□□□ -1
LINC01108-201ENST00000427276 TTC21BQ7Z4L5 1316 aa8.82□□□□□ -1
LINC01108-201ENST00000427276 NLRP6P59044 892 aa8.82□□□□□ -1
LINC01108-201ENST00000427276 BRF1Q92994 677 aa8.82□□□□□ -1
LINC01108-201ENST00000427276 ECHDC1Q9NTX5 307 aa8.82□□□□□ -1
LINC01108-201ENST00000427276 DDX19AQ9NUU7 478 aaKnown RBP8.82□□□□□ -1
LINC01108-201ENST00000427276 CHPF2Q9P2E5 772 aa8.82□□□□□ -1
LINC01108-201ENST00000427276 TAF6LQ9Y6J9 622 aa8.82□□□□□ -1
LINC01108-201ENST00000427276 EDC4Q6P2E9 1401 aaKnown RBP8.82□□□□□ -1
LINC01108-201ENST00000427276 LMTK2Q8IWU2 1503 aa8.82□□□□□ -1
LINC01108-201ENST00000427276 CTIFO43310 598 aaKnown RBP8.81□□□□□ -1
LINC01108-201ENST00000427276 PSMA5P28066 241 aa8.81□□□□□ -1
LINC01108-201ENST00000427276 ME1P48163 572 aa8.81□□□□□ -1
LINC01108-201ENST00000427276 CCDC73Q6ZRK6 1079 aa8.81□□□□□ -1
LINC01108-201ENST00000427276 SSH3Q8TE77 659 aa8.81□□□□□ -1
LINC01108-201ENST00000427276 ZFP91Q96JP5 570 aaPredicted RBP8.81□□□□□ -1
LINC01108-201ENST00000427276 SSH2Q76I76 1423 aa8.81□□□□□ -1
LINC01108-201ENST00000427276 REREQ9P2R6 1566 aa8.81□□□□□ -1
LINC01108-201ENST00000427276 MYO5BQ9ULV0 1848 aa8.81□□□□□ -1
LINC01108-201ENST00000427276 CCT2P78371 535 aaKnown RBP8.81□□□□□ -1
LINC01108-201ENST00000427276 G3BP1Q13283 466 aaKnown RBP eCLIP8.81□□□□□ -1
LINC01108-201ENST00000427276 GNL2Q13823 731 aaKnown RBP8.81□□□□□ -1
LINC01108-201ENST00000427276 KMT5BQ4FZB7 885 aa8.81□□□□□ -1
LINC01108-201ENST00000427276 RNF20Q5VTR2 975 aa8.81□□□□□ -1
LINC01108-201ENST00000427276 C11orf57Q6ZUT1 292 aaPredicted RBP8.81□□□□□ -1
LINC01108-201ENST00000427276 CCAR2Q8N163 923 aaKnown RBP8.81□□□□□ -1
LINC01108-201ENST00000427276 KIF18AQ8NI77 898 aa8.81□□□□□ -1
LINC01108-201ENST00000427276 KLHDC4Q8TBB5 520 aa8.81□□□□□ -1
LINC01108-201ENST00000427276 BCCIPQ9P287 314 aaKnown RBP eCLIP8.81□□□□□ -1
LINC01108-201ENST00000427276 CCDC66A2RUB6 948 aa8.81□□□□□ -1
LINC01108-201ENST00000427276 KINO60870 393 aaKnown RBP8.81□□□□□ -1
LINC01108-201ENST00000427276 ST3GAL1Q11201 340 aa8.81□□□□□ -1
LINC01108-201ENST00000427276 SF3A1Q15459 793 aaKnown RBP8.81□□□□□ -1
LINC01108-201ENST00000427276 ERCC6LQ2NKX8 1250 aa8.81□□□□□ -1
LINC01108-201ENST00000427276 RICTORQ6R327 1708 aa8.81□□□□□ -1
LINC01108-201ENST00000427276 CCDC171Q6TFL3 1326 aa8.81□□□□□ -1
LINC01108-201ENST00000427276 NPHP3Q7Z494 1330 aa8.81□□□□□ -1
LINC01108-201ENST00000427276 CCAR1Q8IX12 1150 aaKnown RBP8.81□□□□□ -1
LINC01108-201ENST00000427276 AOPEPQ8N6M6 819 aa8.81□□□□□ -1
LINC01108-201ENST00000427276 DNAJC2Q99543 621 aaKnown RBP8.81□□□□□ -1
LINC01108-201ENST00000427276 DDX41Q9UJV9 622 aaKnown RBP8.81□□□□□ -1
LINC01108-201ENST00000427276 CPSF1Q10570 1443 aaKnown RBP8.8□□□□□ -1
LINC01108-201ENST00000427276 HTATSF1O43719 755 aaKnown RBP8.8□□□□□ -1
LINC01108-201ENST00000427276 CWF19L2Q2TBE0 894 aaKnown RBP8.8□□□□□ -1
LINC01108-201ENST00000427276 HSP90AB4PQ58FF6 505 aa8.8□□□□□ -1
LINC01108-201ENST00000427276 FBXO38Q6PIJ6 1188 aa8.8□□□□□ -1
LINC01108-201ENST00000427276 SYT10Q6XYQ8 523 aa8.8□□□□□ -1
LINC01108-201ENST00000427276 LRRC8AQ8IWT6 810 aa8.8□□□□□ -1
LINC01108-201ENST00000427276 DNAAF4Q8WXU2 420 aa8.8□□□□□ -1
LINC01108-201ENST00000427276 CLSTN2Q9H4D0 955 aa8.8□□□□□ -1
LINC01108-201ENST00000427276 DLG5Q8TDM6 1919 aa8.8□□□□□ -1
LINC01108-201ENST00000427276 SLC27A2O14975 620 aa8.8□□□□□ -1
LINC01108-201ENST00000427276 TEFQ10587 303 aa8.8□□□□□ -1
LINC01108-201ENST00000427276 PTPN21Q16825 1174 aa8.8□□□□□ -1
LINC01108-201ENST00000427276 ZNF397Q8NF99 534 aaPredicted RBP8.8□□□□□ -1
LINC01108-201ENST00000427276 PGBD1Q96JS3 809 aa8.8□□□□□ -1
LINC01108-201ENST00000427276 SLC26A8Q96RN1 970 aa8.8□□□□□ -1
LINC01108-201ENST00000427276 ZSWIM6Q9HCJ5 1215 aa8.8□□□□□ -1
LINC01108-201ENST00000427276 TMC6Q7Z403 805 aa8.79□□□□□ -1
LINC01108-201ENST00000427276 CDK12Q9NYV4 1490 aaPredicted RBP8.79□□□□□ -1
LINC01108-201ENST00000427276 PRR36Q9H6K5 1346 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms