RNA–Protein interactions for RNA: ENST00000426726.7

RUNDC3A-202, Transcript of RUN domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RUNDC3A, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-202ENST00000426726 HLFQ16534 295 aa28.21■■■□□ 2.11
RUNDC3A-202ENST00000426726 FAM182BQ5T319 152 aa28.21■■■□□ 2.11
RUNDC3A-202ENST00000426726 PA2G4Q9UQ80 394 aaKnown RBP28.21■■■□□ 2.11
RUNDC3A-202ENST00000426726 CNTNAP4Q9C0A0 1308 aa28.21■■■□□ 2.11
RUNDC3A-202ENST00000426726 PCCAP05165 728 aaPredicted RBP28.21■■■□□ 2.11
RUNDC3A-202ENST00000426726 IL1RAPL2Q9NP60 686 aa28.21■■■□□ 2.11
RUNDC3A-202ENST00000426726 STAP2Q9UGK3 403 aa28.21■■■□□ 2.11
RUNDC3A-202ENST00000426726 TUBGCP6Q96RT7 1819 aa28.21■■■□□ 2.11
RUNDC3A-202ENST00000426726 PTF1AQ7RTS3 328 aa28.2■■■□□ 2.11
RUNDC3A-202ENST00000426726 BRWD3Q6RI45 1802 aa28.2■■■□□ 2.1
RUNDC3A-202ENST00000426726 BCORQ6W2J9 1755 aa28.2■■■□□ 2.1
RUNDC3A-202ENST00000426726 SEC24BO95487 1268 aa28.19■■■□□ 2.1
RUNDC3A-202ENST00000426726 FOXO4P98177 505 aa28.19■■■□□ 2.1
RUNDC3A-202ENST00000426726 G3BP1Q13283 466 aaKnown RBP eCLIP28.19■■■□□ 2.1
RUNDC3A-202ENST00000426726 ZNF772Q68DY9 489 aaPredicted RBP28.19■■■□□ 2.1
RUNDC3A-202ENST00000426726 COPRSQ9NQ92 184 aa28.19■■■□□ 2.1
RUNDC3A-202ENST00000426726 TBC1D2BQ9UPU7 963 aa28.19■■■□□ 2.1
RUNDC3A-202ENST00000426726 ZBTB38Q8NAP3 1195 aaPredicted RBP28.19■■■□□ 2.1
RUNDC3A-202ENST00000426726 NLRP10Q86W26 655 aa28.18■■■□□ 2.1
RUNDC3A-202ENST00000426726 LINC00116Q8NCU8 138 aa28.18■■■□□ 2.1
RUNDC3A-202ENST00000426726 RFX5P48382 616 aaPredicted RBP28.18■■■□□ 2.1
RUNDC3A-202ENST00000426726 LMBR1LQ6UX01 489 aa28.18■■■□□ 2.1
RUNDC3A-202ENST00000426726 CDC45O75419 566 aa28.17■■■□□ 2.1
RUNDC3A-202ENST00000426726 CLASRPQ8N2M8 674 aaKnown RBP28.17■■■□□ 2.1
RUNDC3A-202ENST00000426726 CDHR2Q9BYE9 1310 aa28.17■■■□□ 2.1
RUNDC3A-202ENST00000426726 PLA2G12BQ9BX93 195 aa28.16■■■□□ 2.1
RUNDC3A-202ENST00000426726 TAF1LQ8IZX4 1826 aa28.15■■■□□ 2.1
RUNDC3A-202ENST00000426726 RTL5Q5HYW3 569 aaPredicted RBP28.15■■■□□ 2.1
RUNDC3A-202ENST00000426726 BCL11BQ9C0K0 894 aaPredicted RBP28.15■■■□□ 2.1
RUNDC3A-202ENST00000426726 EIF5BO60841 1220 aaKnown RBP28.14■■■□□ 2.1
RUNDC3A-202ENST00000426726 GPTP24298 496 aa28.14■■■□□ 2.1
RUNDC3A-202ENST00000426726 PTPN12Q05209 780 aaKnown RBP28.14■■■□□ 2.1
RUNDC3A-202ENST00000426726 RC3H1Q5TC82 1133 aaKnown RBP28.14■■■□□ 2.1
RUNDC3A-202ENST00000426726 ZNF34Q8IZ26 560 aa28.14■■■□□ 2.1
RUNDC3A-202ENST00000426726 CAMTA2O94983 1202 aa28.14■■■□□ 2.09
RUNDC3A-202ENST00000426726 RBM6P78332 1123 aaKnown RBP28.13■■■□□ 2.09
RUNDC3A-202ENST00000426726 FAM196AQ6ZSG2 479 aa28.13■■■□□ 2.09
RUNDC3A-202ENST00000426726 TBC1D9Q6ZT07 1266 aa28.13■■■□□ 2.09
RUNDC3A-202ENST00000426726 KRT27Q7Z3Y8 459 aa28.13■■■□□ 2.09
RUNDC3A-202ENST00000426726 CCNL1Q9UK58 526 aaPredicted RBP28.13■■■□□ 2.09
RUNDC3A-202ENST00000426726 USP42Q9H9J4 1324 aaKnown RBP28.13■■■□□ 2.09
RUNDC3A-202ENST00000426726 SDSP20132 328 aa28.13■■■□□ 2.09
RUNDC3A-202ENST00000426726 SIL1Q9H173 461 aa28.13■■■□□ 2.09
RUNDC3A-202ENST00000426726 SCN7AQ01118 1682 aa28.12■■■□□ 2.09
RUNDC3A-202ENST00000426726 SASH1O94885 1247 aa28.12■■■□□ 2.09
RUNDC3A-202ENST00000426726 NUTM1Q86Y26 1132 aa28.12■■■□□ 2.09
RUNDC3A-202ENST00000426726 CHMP3Q9Y3E7 222 aa28.12■■■□□ 2.09
RUNDC3A-202ENST00000426726 KLHDC4Q8TBB5 520 aa28.11■■■□□ 2.09
RUNDC3A-202ENST00000426726 FAM89AQ96GI7 184 aa28.11■■■□□ 2.09
RUNDC3A-202ENST00000426726 MYH3P11055 1940 aa28.11■■■□□ 2.09
RUNDC3A-202ENST00000426726 RGL2O15211 777 aa28.11■■■□□ 2.09
RUNDC3A-202ENST00000426726 ZNF652Q9Y2D9 606 aa28.11■■■□□ 2.09
RUNDC3A-202ENST00000426726 TTC41PQ6P2S7 1318 aa28.11■■■□□ 2.09
RUNDC3A-202ENST00000426726 IPO9Q96P70 1041 aaKnown RBP28.1■■■□□ 2.09
RUNDC3A-202ENST00000426726 UBN2Q6ZU65 1347 aa28.1■■■□□ 2.09
RUNDC3A-202ENST00000426726 MFAP1P55081 439 aaKnown RBP28.09■■■□□ 2.09
RUNDC3A-202ENST00000426726 PARP10Q53GL7 1025 aa28.09■■■□□ 2.09
RUNDC3A-202ENST00000426726 TSHZ3Q63HK5 1081 aa28.09■■■□□ 2.09
RUNDC3A-202ENST00000426726 CASC1Q6TDU7 716 aa28.09■■■□□ 2.09
RUNDC3A-202ENST00000426726 GPATCH3Q96I76 525 aa28.09■■■□□ 2.09
RUNDC3A-202ENST00000426726 TBC1D32Q96NH3 1257 aa28.09■■■□□ 2.09
RUNDC3A-202ENST00000426726 TRMT112Q9UI30 125 aaKnown RBP28.09■■■□□ 2.09
RUNDC3A-202ENST00000426726 IFIT2P09913 472 aaKnown RBP28.08■■■□□ 2.09
RUNDC3A-202ENST00000426726 DDRGK1Q96HY6 314 aa28.08■■■□□ 2.09
RUNDC3A-202ENST00000426726 C4BP0C0L5 1744 aa28.08■■■□□ 2.09
RUNDC3A-202ENST00000426726 KCNQ4P56696 695 aa28.08■■■□□ 2.08
RUNDC3A-202ENST00000426726 CLEC4GQ6UXB4 293 aa28.08■■■□□ 2.08
RUNDC3A-202ENST00000426726 AACSQ86V21 672 aa28.07■■■□□ 2.08
RUNDC3A-202ENST00000426726 RPS6KA4O75676 772 aa28.06■■■□□ 2.08
RUNDC3A-202ENST00000426726 PI4K2BQ8TCG2 481 aa28.06■■■□□ 2.08
RUNDC3A-202ENST00000426726 CSF1RP07333 972 aa28.06■■■□□ 2.08
RUNDC3A-202ENST00000426726 LAMB2P55268 1798 aa28.05■■■□□ 2.08
RUNDC3A-202ENST00000426726 ERC2O15083 957 aa28.05■■■□□ 2.08
RUNDC3A-202ENST00000426726 AK7Q96M32 723 aa28.05■■■□□ 2.08
RUNDC3A-202ENST00000426726 IRS4O14654 1257 aaPredicted RBP28.04■■■□□ 2.08
RUNDC3A-202ENST00000426726 ECHDC1Q9NTX5 307 aa28.04■■■□□ 2.08
RUNDC3A-202ENST00000426726 AK9Q5TCS8 1911 aa28.04■■■□□ 2.08
RUNDC3A-202ENST00000426726 GLRX3O76003 335 aaKnown RBP28.04■■■□□ 2.08
RUNDC3A-202ENST00000426726 CCDC57Q2TAC2 916 aa28.04■■■□□ 2.08
RUNDC3A-202ENST00000426726 FBXO3Q9UK99 471 aa28.04■■■□□ 2.08
RUNDC3A-202ENST00000426726 CIAO1O76071 339 aa28.03■■■□□ 2.08
RUNDC3A-202ENST00000426726 EAF2Q96CJ1 260 aaPredicted RBP28.03■■■□□ 2.08
RUNDC3A-202ENST00000426726 SH3TC1Q8TE82 1336 aa28.03■■■□□ 2.08
RUNDC3A-202ENST00000426726 CTSWP56202 376 aa28.02■■■□□ 2.08
RUNDC3A-202ENST00000426726 UTP14AQ9BVJ6 771 aaKnown RBP28.02■■■□□ 2.08
RUNDC3A-202ENST00000426726 C22orf23Q9BZE7 217 aa28.02■■■□□ 2.08
RUNDC3A-202ENST00000426726 GNPATO15228 680 aa28.02■■■□□ 2.08
RUNDC3A-202ENST00000426726 PDE8AO60658 829 aa28.02■■■□□ 2.08
RUNDC3A-202ENST00000426726 IL15P40933 162 aaPredicted RBP28.02■■■□□ 2.08
RUNDC3A-202ENST00000426726 NIP7Q9Y221 180 aaKnown RBP eCLIP28.02■■■□□ 2.08
RUNDC3A-202ENST00000426726 TRIM6-TRIM34B2RNG4 842 aa28.01■■■□□ 2.07
RUNDC3A-202ENST00000426726 SUSD4Q5VX71 490 aa28.01■■■□□ 2.07
RUNDC3A-202ENST00000426726 EYA2O00167 538 aa28.01■■■□□ 2.07
RUNDC3A-202ENST00000426726 HSP90B1P14625 803 aaKnown RBP28.01■■■□□ 2.07
RUNDC3A-202ENST00000426726 RTCBQ9Y3I0 505 aaKnown RBP28.01■■■□□ 2.07
RUNDC3A-202ENST00000426726 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.01■■■□□ 2.07
RUNDC3A-202ENST00000426726 TFCP2Q12800 502 aa28■■■□□ 2.07
RUNDC3A-202ENST00000426726 IFIT5Q13325 482 aaKnown RBP28■■■□□ 2.07
RUNDC3A-202ENST00000426726 SYNE4Q8N205 404 aa28■■■□□ 2.07
RUNDC3A-202ENST00000426726 TNNI3KQ59H18 835 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms