RNA–Protein interactions for RNA: ENST00000426407.2

PGAM4P1-201, Transcript of phosphoglycerate mutase family member 4 pseudogene 1, humanhuman

BASIC

Gene PGAM4P1, Length 654 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM4P1-201ENST00000426407 CASP7P55210 303 aa13.25□□□□□ -0.29
PGAM4P1-201ENST00000426407 RTL5Q5HYW3 569 aaPredicted RBP13.25□□□□□ -0.29
PGAM4P1-201ENST00000426407 FLAD1Q8NFF5 587 aa13.25□□□□□ -0.29
PGAM4P1-201ENST00000426407 C9orf78Q9NZ63 289 aaPredicted RBP13.25□□□□□ -0.29
PGAM4P1-201ENST00000426407 ZNF652Q9Y2D9 606 aa13.25□□□□□ -0.29
PGAM4P1-201ENST00000426407 PCDHB15Q9Y5E8 787 aa13.25□□□□□ -0.29
PGAM4P1-201ENST00000426407 RGL2O15211 777 aa13.24□□□□□ -0.29
PGAM4P1-201ENST00000426407 NFIXQ14938 502 aa13.24□□□□□ -0.29
PGAM4P1-201ENST00000426407 KAZALD1Q96I82 304 aa13.24□□□□□ -0.29
PGAM4P1-201ENST00000426407 SUCLG2Q96I99 432 aa13.24□□□□□ -0.29
PGAM4P1-201ENST00000426407 BCORQ6W2J9 1755 aa13.24□□□□□ -0.29
PGAM4P1-201ENST00000426407 N4BP2Q86UW6 1770 aaPredicted RBP13.23□□□□□ -0.29
PGAM4P1-201ENST00000426407 GNAI3P08754 354 aa13.23□□□□□ -0.29
PGAM4P1-201ENST00000426407 TM4SF1P30408 202 aa13.23□□□□□ -0.29
PGAM4P1-201ENST00000426407 EPHA10Q5JZY3 1008 aa13.23□□□□□ -0.29
PGAM4P1-201ENST00000426407 ERICH6BQ5W0A0 696 aa13.23□□□□□ -0.29
PGAM4P1-201ENST00000426407 UBE3BQ7Z3V4 1068 aa13.23□□□□□ -0.29
PGAM4P1-201ENST00000426407 FAM89AQ96GI7 184 aa13.23□□□□□ -0.29
PGAM4P1-201ENST00000426407 LRRFIP2Q9Y608 721 aaKnown RBP13.23□□□□□ -0.29
PGAM4P1-201ENST00000426407 SCN7AQ01118 1682 aa13.23□□□□□ -0.29
PGAM4P1-201ENST00000426407 IBTKQ9P2D0 1353 aaPredicted RBP13.22□□□□□ -0.29
PGAM4P1-201ENST00000426407 NTSR2O95665 410 aa13.22□□□□□ -0.29
PGAM4P1-201ENST00000426407 PCCAP05165 728 aaPredicted RBP13.22□□□□□ -0.29
PGAM4P1-201ENST00000426407 UBTFL1P0CB47 393 aaPredicted RBP13.22□□□□□ -0.29
PGAM4P1-201ENST00000426407 MSL1Q68DK7 614 aa13.22□□□□□ -0.29
PGAM4P1-201ENST00000426407 ZBTB38Q8NAP3 1195 aaPredicted RBP13.22□□□□□ -0.29
PGAM4P1-201ENST00000426407 SETDB2Q96T68 719 aa13.22□□□□□ -0.29
PGAM4P1-201ENST00000426407 TRMT112Q9UI30 125 aaKnown RBP13.22□□□□□ -0.29
PGAM4P1-201ENST00000426407 GNAI2P04899 355 aa13.21□□□□□ -0.29
PGAM4P1-201ENST00000426407 DDR1Q08345 913 aa13.21□□□□□ -0.29
PGAM4P1-201ENST00000426407 R3HDM1Q15032 1099 aaKnown RBP13.21□□□□□ -0.29
PGAM4P1-201ENST00000426407 PARP10Q53GL7 1025 aa13.21□□□□□ -0.29
PGAM4P1-201ENST00000426407 NUTM1Q86Y26 1132 aa13.21□□□□□ -0.29
PGAM4P1-201ENST00000426407 SIRT2Q8IXJ6 389 aa13.21□□□□□ -0.29
PGAM4P1-201ENST00000426407 CCDC24Q8N4L8 307 aa13.21□□□□□ -0.29
PGAM4P1-201ENST00000426407 UTP14AQ9BVJ6 771 aaKnown RBP13.21□□□□□ -0.29
PGAM4P1-201ENST00000426407 AFDNP55196 1824 aaKnown RBP13.2□□□□□ -0.3
PGAM4P1-201ENST00000426407 ANKRD36CQ5JPF3 1778 aa13.2□□□□□ -0.3
PGAM4P1-201ENST00000426407 FOXO4P98177 505 aa13.2□□□□□ -0.3
PGAM4P1-201ENST00000426407 ERFEQ4G0M1 354 aa13.2□□□□□ -0.3
PGAM4P1-201ENST00000426407 NLGN1Q8N2Q7 840 aa13.2□□□□□ -0.3
PGAM4P1-201ENST00000426407 CHMP4BQ9H444 224 aaKnown RBP13.2□□□□□ -0.3
PGAM4P1-201ENST00000426407 PPP4R2Q9NY27 417 aa13.2□□□□□ -0.3
PGAM4P1-201ENST00000426407 POLRMTO00411 1230 aaKnown RBP13.19□□□□□ -0.3
PGAM4P1-201ENST00000426407 IGHDP01880 384 aa13.19□□□□□ -0.3
PGAM4P1-201ENST00000426407 HCLS1P14317 486 aaPredicted RBP13.19□□□□□ -0.3
PGAM4P1-201ENST00000426407 AAMPQ13685 434 aa13.19□□□□□ -0.3
PGAM4P1-201ENST00000426407 B4GALNT3Q6L9W6 998 aa13.19□□□□□ -0.3
PGAM4P1-201ENST00000426407 CEP85Q6P2H3 762 aa13.19□□□□□ -0.3
PGAM4P1-201ENST00000426407 PPP1R42Q7Z4L9 355 aa13.19□□□□□ -0.3
PGAM4P1-201ENST00000426407 ANKRD44Q8N8A2 993 aa13.19□□□□□ -0.3
PGAM4P1-201ENST00000426407 BICC1Q9H694 974 aaKnown RBP13.19□□□□□ -0.3
PGAM4P1-201ENST00000426407 PSDA5PKW4 1024 aaPredicted RBP13.18□□□□□ -0.3
PGAM4P1-201ENST00000426407 IRS4O14654 1257 aaPredicted RBP13.18□□□□□ -0.3
PGAM4P1-201ENST00000426407 SERPINB2P05120 415 aa13.18□□□□□ -0.3
PGAM4P1-201ENST00000426407 ATP8B2P98198 1209 aa13.18□□□□□ -0.3
PGAM4P1-201ENST00000426407 NBPF5PQ86XG9 351 aaPredicted RBP13.18□□□□□ -0.3
PGAM4P1-201ENST00000426407 QSER1Q2KHR3 1735 aa13.18□□□□□ -0.3
PGAM4P1-201ENST00000426407 SH3TC1Q8TE82 1336 aa13.17□□□□□ -0.3
PGAM4P1-201ENST00000426407 CDHR2Q9BYE9 1310 aa13.17□□□□□ -0.3
PGAM4P1-201ENST00000426407 PNMA6EA0A0J9YXQ4 647 aa13.17□□□□□ -0.3
PGAM4P1-201ENST00000426407 MMP10P09238 476 aa13.17□□□□□ -0.3
PGAM4P1-201ENST00000426407 C3orf67Q6ZVT6 689 aa13.17□□□□□ -0.3
PGAM4P1-201ENST00000426407 PLA2G12BQ9BX93 195 aa13.17□□□□□ -0.3
PGAM4P1-201ENST00000426407 CARMIL3Q8ND23 1372 aa13.17□□□□□ -0.3
PGAM4P1-201ENST00000426407 ZBTB7AO95365 584 aa13.16□□□□□ -0.3
PGAM4P1-201ENST00000426407 RABL6Q3YEC7 729 aaPredicted RBP13.16□□□□□ -0.3
PGAM4P1-201ENST00000426407 SLC10A5Q5PT55 438 aa13.16□□□□□ -0.3
PGAM4P1-201ENST00000426407 PRR5LQ6MZQ0 368 aa13.16□□□□□ -0.3
PGAM4P1-201ENST00000426407 LMBR1LQ6UX01 489 aa13.16□□□□□ -0.3
PGAM4P1-201ENST00000426407 TPTE2Q6XPS3 522 aa13.16□□□□□ -0.3
PGAM4P1-201ENST00000426407 RPAP2Q8IXW5 612 aaPredicted RBP13.16□□□□□ -0.3
PGAM4P1-201ENST00000426407 SLC16A10Q8TF71 515 aa13.16□□□□□ -0.3
PGAM4P1-201ENST00000426407 NYXQ9GZU5 481 aa13.16□□□□□ -0.3
PGAM4P1-201ENST00000426407 ABCC12Q96J65 1359 aa13.16□□□□□ -0.3
PGAM4P1-201ENST00000426407 PDE8AO60658 829 aa13.15□□□□□ -0.3
PGAM4P1-201ENST00000426407 CSF1RP07333 972 aa13.15□□□□□ -0.3
PGAM4P1-201ENST00000426407 MTX1Q13505 466 aa13.15□□□□□ -0.3
PGAM4P1-201ENST00000426407 TTLL11Q8NHH1 800 aa13.15□□□□□ -0.3
PGAM4P1-201ENST00000426407 CCDC136Q96JN2 1154 aa13.15□□□□□ -0.3
PGAM4P1-201ENST00000426407 CCDC85AQ96PX6 553 aaPredicted RBP13.15□□□□□ -0.3
PGAM4P1-201ENST00000426407 ATF5Q9Y2D1 282 aaPredicted RBP13.15□□□□□ -0.3
PGAM4P1-201ENST00000426407 COL24A1Q17RW2 1714 aa13.15□□□□□ -0.3
PGAM4P1-201ENST00000426407 GTF2E1P29083 439 aaPredicted RBP13.14□□□□□ -0.31
PGAM4P1-201ENST00000426407 POLA2Q14181 598 aa13.14□□□□□ -0.31
PGAM4P1-201ENST00000426407 CNBD1Q8NA66 436 aa13.14□□□□□ -0.31
PGAM4P1-201ENST00000426407 SSH3Q8TE77 659 aa13.14□□□□□ -0.31
PGAM4P1-201ENST00000426407 HDAC5Q9UQL6 1122 aa13.14□□□□□ -0.31
PGAM4P1-201ENST00000426407 PARP3Q9Y6F1 533 aa13.14□□□□□ -0.31
PGAM4P1-201ENST00000426407 SRGAP3O43295 1099 aa13.13□□□□□ -0.31
PGAM4P1-201ENST00000426407 RFX5P48382 616 aaPredicted RBP13.13□□□□□ -0.31
PGAM4P1-201ENST00000426407 CTSWP56202 376 aa13.13□□□□□ -0.31
PGAM4P1-201ENST00000426407 HDAC1Q13547 482 aaPredicted RBP13.13□□□□□ -0.31
PGAM4P1-201ENST00000426407 KLHDC4Q8TBB5 520 aa13.13□□□□□ -0.31
PGAM4P1-201ENST00000426407 RWDD1Q9H446 243 aaPredicted RBP13.13□□□□□ -0.31
PGAM4P1-201ENST00000426407 PA2G4Q9UQ80 394 aaKnown RBP13.13□□□□□ -0.31
PGAM4P1-201ENST00000426407 CASZ1Q86V15 1759 aa13.12□□□□□ -0.31
PGAM4P1-201ENST00000426407 FAM161AQ3B820 660 aa13.12□□□□□ -0.31
PGAM4P1-201ENST00000426407 GREM2Q9H772 168 aa13.12□□□□□ -0.31
PGAM4P1-201ENST00000426407 CHMP3Q9Y3E7 222 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms