RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 KCNQ3O43525 872 aa19.09■□□□□ 0.65
HDAC6-206ENST00000426196 AOC2O75106 756 aa19.09■□□□□ 0.65
HDAC6-206ENST00000426196 U2SURPO15042 1029 aaKnown RBP19.08■□□□□ 0.64
HDAC6-206ENST00000426196 GRIPAP1Q4V328 841 aa19.08■□□□□ 0.64
HDAC6-206ENST00000426196 LARGE2Q8N3Y3 721 aa19.08■□□□□ 0.64
HDAC6-206ENST00000426196 SNRPA1P09661 255 aaKnown RBP19.07■□□□□ 0.64
HDAC6-206ENST00000426196 BRPF1P55201 1214 aaPredicted RBP19.06■□□□□ 0.64
HDAC6-206ENST00000426196 DGKZQ13574 1117 aa19.06■□□□□ 0.64
HDAC6-206ENST00000426196 CRY2Q49AN0 593 aa19.06■□□□□ 0.64
HDAC6-206ENST00000426196 CELF2O95319 508 aaKnown RBP19.05■□□□□ 0.64
HDAC6-206ENST00000426196 SAPCD2Q86UD0 394 aa19.05■□□□□ 0.64
HDAC6-206ENST00000426196 NIM1KQ8IY84 436 aa19.05■□□□□ 0.64
HDAC6-206ENST00000426196 RPGRQ92834 1020 aaKnown RBP19.05■□□□□ 0.64
HDAC6-206ENST00000426196 NYXQ9GZU5 481 aa19.05■□□□□ 0.64
HDAC6-206ENST00000426196 PRAMEF22A3QJZ6 481 aa19.04■□□□□ 0.64
HDAC6-206ENST00000426196 HHIPL1Q96JK4 782 aa19.04■□□□□ 0.64
HDAC6-206ENST00000426196 ADARB2Q9NS39 739 aaKnown RBP19.04■□□□□ 0.64
HDAC6-206ENST00000426196 COL3A1P02461 1466 aaPredicted RBP19.03■□□□□ 0.64
HDAC6-206ENST00000426196 NUP98P52948 1817 aa19.03■□□□□ 0.64
HDAC6-206ENST00000426196 ABCC12Q96J65 1359 aa19.03■□□□□ 0.64
HDAC6-206ENST00000426196 HLFQ16534 295 aa19.02■□□□□ 0.64
HDAC6-206ENST00000426196 GPRC5DQ9NZD1 345 aa19.02■□□□□ 0.64
HDAC6-206ENST00000426196 NBPF26B4DH59 902 aa19.01■□□□□ 0.63
HDAC6-206ENST00000426196 CC2D1BQ5T0F9 858 aaKnown RBP19.01■□□□□ 0.63
HDAC6-206ENST00000426196 CIAPIN1Q6FI81 312 aa19.01■□□□□ 0.63
HDAC6-206ENST00000426196 NBPF10Q6P3W6 841 aaKnown RBP19.01■□□□□ 0.63
HDAC6-206ENST00000426196 NUTM1Q86Y26 1132 aa19.01■□□□□ 0.63
HDAC6-206ENST00000426196 NBPF15Q8N660 670 aa19.01■□□□□ 0.63
HDAC6-206ENST00000426196 LAMB4A4D0S4 1761 aa19.01■□□□□ 0.63
HDAC6-206ENST00000426196 RIC1Q4ADV7 1423 aa19■□□□□ 0.63
HDAC6-206ENST00000426196 PPIP5K2O43314 1243 aa19■□□□□ 0.63
HDAC6-206ENST00000426196 HOXA10P31260 410 aaPredicted RBP19■□□□□ 0.63
HDAC6-206ENST00000426196 TMX4Q9H1E5 349 aaPredicted RBP19■□□□□ 0.63
HDAC6-206ENST00000426196 KIF7Q2M1P5 1343 aa19■□□□□ 0.63
HDAC6-206ENST00000426196 PPEF1O14829 653 aaPredicted RBP18.99■□□□□ 0.63
HDAC6-206ENST00000426196 NOGQ13253 232 aa18.99■□□□□ 0.63
HDAC6-206ENST00000426196 RTF1Q92541 710 aaKnown RBP18.99■□□□□ 0.63
HDAC6-206ENST00000426196 RBM17Q96I25 401 aaKnown RBP18.99■□□□□ 0.63
HDAC6-206ENST00000426196 GLIS2Q9BZE0 524 aaPredicted RBP18.99■□□□□ 0.63
HDAC6-206ENST00000426196 ZNF408Q9H9D4 720 aa18.99■□□□□ 0.63
HDAC6-206ENST00000426196 CLSPNQ9HAW4 1339 aa18.99■□□□□ 0.63
HDAC6-206ENST00000426196 CRAMP1Q96RY5 1269 aa18.98■□□□□ 0.63
HDAC6-206ENST00000426196 IBTKQ9P2D0 1353 aaPredicted RBP18.97■□□□□ 0.63
HDAC6-206ENST00000426196 NPC1L1Q9UHC9 1359 aa18.97■□□□□ 0.63
HDAC6-206ENST00000426196 TCERG1O14776 1098 aaKnown RBP18.97■□□□□ 0.63
HDAC6-206ENST00000426196 PRKAR2BP31323 418 aa18.97■□□□□ 0.63
HDAC6-206ENST00000426196 AOC3Q16853 763 aa18.97■□□□□ 0.63
HDAC6-206ENST00000426196 PHACTR3Q96KR7 559 aa18.97■□□□□ 0.63
HDAC6-206ENST00000426196 VPS33BQ9H267 617 aa18.97■□□□□ 0.63
HDAC6-206ENST00000426196 ERVV-1B6SEH8 477 aa18.96■□□□□ 0.63
HDAC6-206ENST00000426196 ZC3H15Q8WU90 426 aaKnown RBP18.96■□□□□ 0.63
HDAC6-206ENST00000426196 CDHR2Q9BYE9 1310 aa18.96■□□□□ 0.63
HDAC6-206ENST00000426196 AKAP11Q9UKA4 1901 aa18.96■□□□□ 0.63
HDAC6-206ENST00000426196 GMPSP49915 693 aaPredicted RBP18.95■□□□□ 0.62
HDAC6-206ENST00000426196 CXCL9Q07325 125 aa18.95■□□□□ 0.62
HDAC6-206ENST00000426196 PGAP2Q9UHJ9 254 aa18.95■□□□□ 0.62
HDAC6-206ENST00000426196 ZNRF3Q9ULT6 936 aa18.95■□□□□ 0.62
HDAC6-206ENST00000426196 KIF6Q6ZMV9 814 aa18.94■□□□□ 0.62
HDAC6-206ENST00000426196 CDC37L1Q7L3B6 337 aa18.94■□□□□ 0.62
HDAC6-206ENST00000426196 MCM10Q7L590 875 aa18.94■□□□□ 0.62
HDAC6-206ENST00000426196 NGEFQ8N5V2 710 aa18.94■□□□□ 0.62
HDAC6-206ENST00000426196 SUPT20HQ8NEM7 779 aa18.94■□□□□ 0.62
HDAC6-206ENST00000426196 BCL2L13Q9BXK5 485 aa18.94■□□□□ 0.62
HDAC6-206ENST00000426196 RSPH6AQ9H0K4 717 aa18.94■□□□□ 0.62
HDAC6-206ENST00000426196 MAP3K15Q6ZN16 1313 aa18.94■□□□□ 0.62
HDAC6-206ENST00000426196 GPTP24298 496 aa18.93■□□□□ 0.62
HDAC6-206ENST00000426196 SOX10P56693 466 aa18.93■□□□□ 0.62
HDAC6-206ENST00000426196 HUNKP57058 714 aa18.93■□□□□ 0.62
HDAC6-206ENST00000426196 SLC51AQ86UW1 340 aa18.93■□□□□ 0.62
HDAC6-206ENST00000426196 PER1O15534 1290 aaPredicted RBP18.92■□□□□ 0.62
HDAC6-206ENST00000426196 ATP6V0A2Q9Y487 856 aa18.92■□□□□ 0.62
HDAC6-206ENST00000426196 TNIP1Q15025 636 aa18.91■□□□□ 0.62
HDAC6-206ENST00000426196 PRPF38BQ5VTL8 546 aaKnown RBP18.91■□□□□ 0.62
HDAC6-206ENST00000426196 ZIC5Q96T25 663 aa18.91■□□□□ 0.62
HDAC6-206ENST00000426196 SAGE1Q9NXZ1 904 aa18.91■□□□□ 0.62
HDAC6-206ENST00000426196 POLR2AP24928 1970 aaKnown RBP18.91■□□□□ 0.62
HDAC6-206ENST00000426196 UBN2Q6ZU65 1347 aa18.91■□□□□ 0.62
HDAC6-206ENST00000426196 CNGB1Q14028 1251 aaPredicted RBP18.9■□□□□ 0.62
HDAC6-206ENST00000426196 SUSD4Q5VX71 490 aa18.9■□□□□ 0.62
HDAC6-206ENST00000426196 TRPM4Q8TD43 1214 aa18.9■□□□□ 0.62
HDAC6-206ENST00000426196 CFAP53Q96M91 514 aa18.9■□□□□ 0.62
HDAC6-206ENST00000426196 NLRP3Q96P20 1036 aa18.9■□□□□ 0.62
HDAC6-206ENST00000426196 HIRAP54198 1017 aaPredicted RBP18.89■□□□□ 0.61
HDAC6-206ENST00000426196 DCTN1Q14203 1278 aa18.89■□□□□ 0.61
HDAC6-206ENST00000426196 DPP8Q6V1X1 898 aaPredicted RBP18.89■□□□□ 0.61
HDAC6-206ENST00000426196 TTLL7Q6ZT98 887 aa18.89■□□□□ 0.61
HDAC6-206ENST00000426196 RTFDC1Q9BY42 306 aaPredicted RBP18.89■□□□□ 0.61
HDAC6-206ENST00000426196 NUDCQ9Y266 331 aa18.89■□□□□ 0.61
HDAC6-206ENST00000426196 H7C1D1 291 aa18.88■□□□□ 0.61
HDAC6-206ENST00000426196 HTATSF1O43719 755 aaKnown RBP18.88■□□□□ 0.61
HDAC6-206ENST00000426196 RAD17O75943 681 aa18.88■□□□□ 0.61
HDAC6-206ENST00000426196 NTSR2O95665 410 aa18.88■□□□□ 0.61
HDAC6-206ENST00000426196 TRIM26Q12899 539 aaPredicted RBP18.88■□□□□ 0.61
HDAC6-206ENST00000426196 TAF7Q15545 349 aaPredicted RBP18.88■□□□□ 0.61
HDAC6-206ENST00000426196 C3orf67Q6ZVT6 689 aa18.88■□□□□ 0.61
HDAC6-206ENST00000426196 PPP1R42Q7Z4L9 355 aa18.88■□□□□ 0.61
HDAC6-206ENST00000426196 ZBTB3Q9H5J0 574 aa18.88■□□□□ 0.61
HDAC6-206ENST00000426196 RRP7AQ9Y3A4 280 aaKnown RBP18.88■□□□□ 0.61
HDAC6-206ENST00000426196 KIAA2012Q0VF49 1180 aa18.87■□□□□ 0.61
HDAC6-206ENST00000426196 RGMBQ6NW40 437 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms