RNA–Protein interactions for RNA: ENST00000422875.5

TRAPPC10-203, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best)

Gene TRAPPC10, Length 5,267 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-203ENST00000422875 THOC2Q8NI27 1593 aaKnown RBP20.26■□□□□ 0.83
TRAPPC10-203ENST00000422875 IGHMBP2P38935 993 aaKnown RBP20.26■□□□□ 0.83
TRAPPC10-203ENST00000422875 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.26■□□□□ 0.831e-8■■■■■ 86.5
TRAPPC10-203ENST00000422875 PIK3R4Q99570 1358 aa20.25■□□□□ 0.83
TRAPPC10-203ENST00000422875 CCDC150Q8NCX0 1101 aa20.25■□□□□ 0.83
TRAPPC10-203ENST00000422875 CPA1P15085 419 aa20.25■□□□□ 0.83
TRAPPC10-203ENST00000422875 LMOD1P29536 600 aaPredicted RBP20.25■□□□□ 0.83
TRAPPC10-203ENST00000422875 ATP8B2P98198 1209 aa20.25■□□□□ 0.83
TRAPPC10-203ENST00000422875 SSRP1Q08945 709 aaKnown RBP20.25■□□□□ 0.83
TRAPPC10-203ENST00000422875 AMOTQ4VCS5 1084 aa20.25■□□□□ 0.83
TRAPPC10-203ENST00000422875 CTCFLQ8NI51 663 aaPredicted RBP20.25■□□□□ 0.83
TRAPPC10-203ENST00000422875 YEATS4O95619 227 aa20.25■□□□□ 0.83
TRAPPC10-203ENST00000422875 SYKP43405 635 aa20.25■□□□□ 0.83
TRAPPC10-203ENST00000422875 FKBP15Q5T1M5 1219 aa20.25■□□□□ 0.83
TRAPPC10-203ENST00000422875 LUZP1Q86V48 1076 aa20.24■□□□□ 0.83
TRAPPC10-203ENST00000422875 ZRANB1Q9UGI0 708 aa20.24■□□□□ 0.83
TRAPPC10-203ENST00000422875 GPATCH8Q9UKJ3 1502 aaKnown RBP20.24■□□□□ 0.83
TRAPPC10-203ENST00000422875 FAM135AQ9P2D6 1515 aa20.24■□□□□ 0.83
TRAPPC10-203ENST00000422875 ANKRD62A6NC57 917 aa20.24■□□□□ 0.83
TRAPPC10-203ENST00000422875 MCM6Q14566 821 aa20.24■□□□□ 0.83
TRAPPC10-203ENST00000422875 SEPT7Q16181 437 aaKnown RBP20.24■□□□□ 0.83
TRAPPC10-203ENST00000422875 CHPF2Q9P2E5 772 aa20.24■□□□□ 0.83
TRAPPC10-203ENST00000422875 DTNBO60941 627 aa20.24■□□□□ 0.83
TRAPPC10-203ENST00000422875 PAFAH1B1P43034 410 aa20.24■□□□□ 0.83
TRAPPC10-203ENST00000422875 TDRD12Q587J7 1177 aaKnown RBP20.24■□□□□ 0.83
TRAPPC10-203ENST00000422875 DNAJC5BQ9UF47 199 aa20.24■□□□□ 0.83
TRAPPC10-203ENST00000422875 PA2G4Q9UQ80 394 aaKnown RBP20.24■□□□□ 0.83
TRAPPC10-203ENST00000422875 KLF18A0A0U1RQI7 1052 aa20.24■□□□□ 0.83
TRAPPC10-203ENST00000422875 CCDC113Q9H0I3 377 aa20.24■□□□□ 0.83
TRAPPC10-203ENST00000422875 CALRP27797 417 aaKnown RBP20.23■□□□□ 0.83
TRAPPC10-203ENST00000422875 MAP3K12Q12852 859 aa20.23■□□□□ 0.83
TRAPPC10-203ENST00000422875 RNF123Q5XPI4 1314 aa20.23■□□□□ 0.83
TRAPPC10-203ENST00000422875 POLKQ9UBT6 870 aa20.23■□□□□ 0.83
TRAPPC10-203ENST00000422875 MARCKSP29966 332 aaPredicted RBP20.23■□□□□ 0.83
TRAPPC10-203ENST00000422875 MATR3P43243 847 aaKnown RBP eCLIP20.23■□□□□ 0.832e-8■■■■■ 29.6
TRAPPC10-203ENST00000422875 TMEM67Q5HYA8 995 aa20.23■□□□□ 0.83
TRAPPC10-203ENST00000422875 SYT1P21579 422 aa20.22■□□□□ 0.83
TRAPPC10-203ENST00000422875 RBM25P49756 843 aaKnown RBP20.22■□□□□ 0.83
TRAPPC10-203ENST00000422875 TIGD1Q96MW7 591 aa20.22■□□□□ 0.83
TRAPPC10-203ENST00000422875 SLC26A6Q9BXS9 759 aa20.22■□□□□ 0.83
TRAPPC10-203ENST00000422875 METAP2P50579 478 aaKnown RBP eCLIP20.22■□□□□ 0.83
TRAPPC10-203ENST00000422875 C17orf53Q8N3J3 647 aaPredicted RBP20.22■□□□□ 0.83
TRAPPC10-203ENST00000422875 MRPS27Q92552 414 aaKnown RBP20.22■□□□□ 0.83
TRAPPC10-203ENST00000422875 GPTP24298 496 aa20.22■□□□□ 0.83
TRAPPC10-203ENST00000422875 IQCA1Q86XH1 822 aa20.21■□□□□ 0.83
TRAPPC10-203ENST00000422875 TTC21BQ7Z4L5 1316 aa20.21■□□□□ 0.83
TRAPPC10-203ENST00000422875 STARD3NLO95772 234 aa20.21■□□□□ 0.83
TRAPPC10-203ENST00000422875 Q6ZUG5 572 aa20.21■□□□□ 0.83
TRAPPC10-203ENST00000422875 ARFGAP3Q9NP61 516 aa20.21■□□□□ 0.83
TRAPPC10-203ENST00000422875 GOLGA6L9A6NEM1 432 aa20.21■□□□□ 0.83
TRAPPC10-203ENST00000422875 N4BP3O15049 544 aa20.21■□□□□ 0.83
TRAPPC10-203ENST00000422875 ZBTB7BO15156 539 aaPredicted RBP20.21■□□□□ 0.83
TRAPPC10-203ENST00000422875 SLU7O95391 586 aaKnown RBP20.21■□□□□ 0.83
TRAPPC10-203ENST00000422875 RNF187Q5TA31 235 aaPredicted RBP20.21■□□□□ 0.83
TRAPPC10-203ENST00000422875 CCDC94Q9BW85 323 aaPredicted RBP20.21■□□□□ 0.83
TRAPPC10-203ENST00000422875 AMOTL2Q9Y2J4 779 aa20.21■□□□□ 0.83
TRAPPC10-203ENST00000422875 ACEP12821 1306 aa20.2■□□□□ 0.82
TRAPPC10-203ENST00000422875 NPHP3Q7Z494 1330 aa20.2■□□□□ 0.82
TRAPPC10-203ENST00000422875 CHMLP26374 656 aa20.2■□□□□ 0.82
TRAPPC10-203ENST00000422875 NLRP5P59047 1200 aa20.2■□□□□ 0.82
TRAPPC10-203ENST00000422875 BCCIPQ9P287 314 aaKnown RBP eCLIP20.2■□□□□ 0.82
TRAPPC10-203ENST00000422875 USO1O60763 962 aaKnown RBP20.2■□□□□ 0.82
TRAPPC10-203ENST00000422875 MTIF2P46199 727 aaKnown RBP20.2■□□□□ 0.82
TRAPPC10-203ENST00000422875 TMEM132AQ24JP5 1023 aa20.2■□□□□ 0.82
TRAPPC10-203ENST00000422875 CTR9Q6PD62 1173 aa20.2■□□□□ 0.82
TRAPPC10-203ENST00000422875 HLTFQ14527 1009 aaKnown RBP eCLIP20.19■□□□□ 0.824e-6■□□□□ 10.4
TRAPPC10-203ENST00000422875 LDHAL6AQ6ZMR3 332 aa20.19■□□□□ 0.82
TRAPPC10-203ENST00000422875 ANKLE2Q86XL3 938 aa20.19■□□□□ 0.82
TRAPPC10-203ENST00000422875 MKNK2Q9HBH9 465 aa20.19■□□□□ 0.82
TRAPPC10-203ENST00000422875 NCOA7Q8NI08 942 aa20.19■□□□□ 0.82
TRAPPC10-203ENST00000422875 PHF8Q9UPP1 1060 aa20.19■□□□□ 0.82
TRAPPC10-203ENST00000422875 KIF14Q15058 1648 aa20.19■□□□□ 0.82
TRAPPC10-203ENST00000422875 INTS4Q96HW7 963 aaKnown RBP20.19■□□□□ 0.82
TRAPPC10-203ENST00000422875 JADE2Q9NQC1 790 aa20.19■□□□□ 0.82
TRAPPC10-203ENST00000422875 TRMT112Q9UI30 125 aaKnown RBP20.19■□□□□ 0.82
TRAPPC10-203ENST00000422875 CCDC194A0A1B0GVG4 234 aa20.18■□□□□ 0.82
TRAPPC10-203ENST00000422875 IDEP14735 1019 aa20.18■□□□□ 0.82
TRAPPC10-203ENST00000422875 NMIQ13287 307 aaPredicted RBP20.18■□□□□ 0.82
TRAPPC10-203ENST00000422875 IPO4Q8TEX9 1081 aaKnown RBP20.18■□□□□ 0.82
TRAPPC10-203ENST00000422875 MCM3P25205 808 aa20.18■□□□□ 0.82
TRAPPC10-203ENST00000422875 FAM173BQ6P4H8 233 aa20.18■□□□□ 0.82
TRAPPC10-203ENST00000422875 CHST3Q7LGC8 479 aa20.18■□□□□ 0.82
TRAPPC10-203ENST00000422875 FAM107BQ9H098 131 aa20.18■□□□□ 0.82
TRAPPC10-203ENST00000422875 SPECC1Q5M775 1068 aa20.18■□□□□ 0.82
TRAPPC10-203ENST00000422875 AFMP43652 599 aa20.18■□□□□ 0.82
TRAPPC10-203ENST00000422875 CCDC178Q5BJE1 867 aa20.18■□□□□ 0.82
TRAPPC10-203ENST00000422875 ZSCAN29Q8IWY8 852 aaPredicted RBP20.18■□□□□ 0.82
TRAPPC10-203ENST00000422875 DYDC1Q8WWB3 177 aa20.18■□□□□ 0.82
TRAPPC10-203ENST00000422875 PHAXQ9H814 394 aaKnown RBP20.18■□□□□ 0.82
TRAPPC10-203ENST00000422875 ADGRL1O94910 1474 aa20.17■□□□□ 0.82
TRAPPC10-203ENST00000422875 UBA5Q9GZZ9 404 aa20.17■□□□□ 0.82
TRAPPC10-203ENST00000422875 KCNG4Q8TDN1 519 aa20.17■□□□□ 0.82
TRAPPC10-203ENST00000422875 IFFO1Q0D2I5 559 aa20.17■□□□□ 0.82
TRAPPC10-203ENST00000422875 ALG1Q9BT22 464 aa20.16■□□□□ 0.82
TRAPPC10-203ENST00000422875 SSR1P43307 286 aaKnown RBP20.16■□□□□ 0.82
TRAPPC10-203ENST00000422875 GIMAP7Q8NHV1 300 aa20.16■□□□□ 0.82
TRAPPC10-203ENST00000422875 PIK3C2GO75747 1445 aa20.16■□□□□ 0.82
TRAPPC10-203ENST00000422875 ZNF76P36508 570 aa20.16■□□□□ 0.82
TRAPPC10-203ENST00000422875 EIF4A2Q14240 407 aaKnown RBP20.16■□□□□ 0.82
TRAPPC10-203ENST00000422875 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms