RNA–Protein interactions for RNA: ENST00000422622.3

SSPN-202, Transcript of sarcospan, humanhuman

TSL 2 BASIC

Gene SSPN, Length 4,348 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-202ENST00000422622 USP21Q9UK80 565 aa12.07□□□□□ -0.48
SSPN-202ENST00000422622 CEMIPQ8WUJ3 1361 aa12.07□□□□□ -0.48
SSPN-202ENST00000422622 IFIT5Q13325 482 aaKnown RBP12.07□□□□□ -0.48
SSPN-202ENST00000422622 LDHAL6AQ6ZMR3 332 aa12.07□□□□□ -0.48
SSPN-202ENST00000422622 GOLIM4O00461 696 aa12.07□□□□□ -0.48
SSPN-202ENST00000422622 PRPF40BQ6NWY9 871 aaKnown RBP12.07□□□□□ -0.48
SSPN-202ENST00000422622 SYAP1Q96A49 352 aaPredicted RBP12.07□□□□□ -0.48
SSPN-202ENST00000422622 MPHOSPH8Q99549 860 aa12.07□□□□□ -0.48
SSPN-202ENST00000422622 ADCY9O60503 1353 aa12.07□□□□□ -0.48
SSPN-202ENST00000422622 CPA1P15085 419 aa12.06□□□□□ -0.48
SSPN-202ENST00000422622 SSH3Q8TE77 659 aa12.06□□□□□ -0.48
SSPN-202ENST00000422622 CHMP5Q9NZZ3 219 aa12.06□□□□□ -0.48
SSPN-202ENST00000422622 XRN1Q8IZH2 1706 aaKnown RBP12.06□□□□□ -0.48
SSPN-202ENST00000422622 TNNT3P45378 269 aaPredicted RBP12.06□□□□□ -0.48
SSPN-202ENST00000422622 MPNDQ8N594 471 aa12.06□□□□□ -0.48
SSPN-202ENST00000422622 TTC39AQ5SRH9 613 aa12.06□□□□□ -0.48
SSPN-202ENST00000422622 RNF214Q8ND24 703 aa12.06□□□□□ -0.48
SSPN-202ENST00000422622 STK3Q13188 491 aa12.05□□□□□ -0.48
SSPN-202ENST00000422622 EAF2Q96CJ1 260 aaPredicted RBP12.05□□□□□ -0.48
SSPN-202ENST00000422622 NIP7Q9Y221 180 aaKnown RBP eCLIP12.05□□□□□ -0.48
SSPN-202ENST00000422622 ANKRD26Q9UPS8 1709 aa12.05□□□□□ -0.48
SSPN-202ENST00000422622 A0A0U1RQG5 324 aaPredicted RBP12.05□□□□□ -0.48
SSPN-202ENST00000422622 ZKSCAN1P17029 563 aaPredicted RBP12.05□□□□□ -0.48
SSPN-202ENST00000422622 VPS37DQ86XT2 251 aa12.05□□□□□ -0.48
SSPN-202ENST00000422622 DBNDD2Q9BQY9 259 aa12.05□□□□□ -0.48
SSPN-202ENST00000422622 RBM10P98175 930 aaKnown RBP12.05□□□□□ -0.48
SSPN-202ENST00000422622 ATG3Q9NT62 314 aa12.05□□□□□ -0.48
SSPN-202ENST00000422622 R3HCC1Q9Y3T6 440 aaKnown RBP12.05□□□□□ -0.48
SSPN-202ENST00000422622 FMN2Q9NZ56 1722 aa12.05□□□□□ -0.48
SSPN-202ENST00000422622 AKAP12Q02952 1782 aa12.04□□□□□ -0.48
SSPN-202ENST00000422622 K7ELQ4 463 aaPredicted RBP12.04□□□□□ -0.48
SSPN-202ENST00000422622 IDH1O75874 414 aaKnown RBP12.04□□□□□ -0.48
SSPN-202ENST00000422622 PTMSP20962 102 aa12.04□□□□□ -0.48
SSPN-202ENST00000422622 BRD2P25440 801 aaKnown RBP12.04□□□□□ -0.48
SSPN-202ENST00000422622 PDIA6Q15084 440 aa12.04□□□□□ -0.48
SSPN-202ENST00000422622 HLFQ16534 295 aa12.04□□□□□ -0.48
SSPN-202ENST00000422622 ESYT1Q9BSJ8 1104 aa12.04□□□□□ -0.48
SSPN-202ENST00000422622 PUS3Q9BZE2 481 aaKnown RBP12.04□□□□□ -0.48
SSPN-202ENST00000422622 LRRC24Q50LG9 513 aa12.04□□□□□ -0.48
SSPN-202ENST00000422622 JAKMIP1Q96N16 626 aaKnown RBP12.04□□□□□ -0.48
SSPN-202ENST00000422622 CHD2O14647 1828 aaKnown RBP12.03□□□□□ -0.48
SSPN-202ENST00000422622 CHMLP26374 656 aa12.03□□□□□ -0.48
SSPN-202ENST00000422622 RABEP1Q15276 862 aa12.03□□□□□ -0.48
SSPN-202ENST00000422622 HEG1Q9ULI3 1381 aa12.03□□□□□ -0.48
SSPN-202ENST00000422622 IRS4O14654 1257 aaPredicted RBP12.03□□□□□ -0.48
SSPN-202ENST00000422622 IFIT1P09914 478 aaKnown RBP12.03□□□□□ -0.48
SSPN-202ENST00000422622 CHMP4CQ96CF2 233 aa12.03□□□□□ -0.48
SSPN-202ENST00000422622 TEX13AQ9BXU3 409 aaPredicted RBP12.03□□□□□ -0.48
SSPN-202ENST00000422622 TRAK2O60296 914 aa12.03□□□□□ -0.48
SSPN-202ENST00000422622 CD2BP2O95400 341 aaKnown RBP12.03□□□□□ -0.48
SSPN-202ENST00000422622 CCDC158Q5M9N0 1113 aa12.03□□□□□ -0.48
SSPN-202ENST00000422622 FAM227BQ96M60 508 aa12.03□□□□□ -0.48
SSPN-202ENST00000422622 KDM6AO15550 1401 aaPredicted RBP12.03□□□□□ -0.48
SSPN-202ENST00000422622 CASTP20810 708 aaKnown RBP12.02□□□□□ -0.48
SSPN-202ENST00000422622 ZNF592Q92610 1267 aa12.02□□□□□ -0.48
SSPN-202ENST00000422622 IBTKQ9P2D0 1353 aaPredicted RBP12.02□□□□□ -0.49
SSPN-202ENST00000422622 HMGB1P09429 215 aaKnown RBP12.02□□□□□ -0.49
SSPN-202ENST00000422622 CCDC129Q6ZRS4 1044 aa12.02□□□□□ -0.49
SSPN-202ENST00000422622 MCTP1Q6DN14 999 aa12.02□□□□□ -0.49
SSPN-202ENST00000422622 USP26Q9BXU7 913 aa12.02□□□□□ -0.49
SSPN-202ENST00000422622 LOC102724428A0A0B4J2F2 783 aa12.01□□□□□ -0.49
SSPN-202ENST00000422622 SNAP23O00161 211 aa12.01□□□□□ -0.49
SSPN-202ENST00000422622 SIK1P57059 783 aa12.01□□□□□ -0.49
SSPN-202ENST00000422622 GNPATO15228 680 aa12.01□□□□□ -0.49
SSPN-202ENST00000422622 ZPR1O75312 459 aa12.01□□□□□ -0.49
SSPN-202ENST00000422622 SLFNL1Q499Z3 407 aa12.01□□□□□ -0.49
SSPN-202ENST00000422622 TAF5LO75529 589 aa12.01□□□□□ -0.49
SSPN-202ENST00000422622 ABCF2Q9UG63 623 aa12.01□□□□□ -0.49
SSPN-202ENST00000422622 JAG2Q9Y219 1238 aa12.01□□□□□ -0.49
SSPN-202ENST00000422622 NMIQ13287 307 aaPredicted RBP12□□□□□ -0.49
SSPN-202ENST00000422622 LRRC2Q9BYS8 371 aa12□□□□□ -0.49
SSPN-202ENST00000422622 WWC3Q9ULE0 1092 aa12□□□□□ -0.49
SSPN-202ENST00000422622 PALD1Q9ULE6 856 aa12□□□□□ -0.49
SSPN-202ENST00000422622 RGS12O14924 1447 aa12□□□□□ -0.49
SSPN-202ENST00000422622 ATP10DQ9P241 1426 aa12□□□□□ -0.49
SSPN-202ENST00000422622 ANKRD18BA2A2Z9 1011 aa12□□□□□ -0.49
SSPN-202ENST00000422622 VPS37CA5D8V6 355 aaPredicted RBP12□□□□□ -0.49
SSPN-202ENST00000422622 SASH1O94885 1247 aa12□□□□□ -0.49
SSPN-202ENST00000422622 FBXW7Q969H0 707 aa12□□□□□ -0.49
SSPN-202ENST00000422622 HAND2P61296 217 aa12□□□□□ -0.49
SSPN-202ENST00000422622 TCIRG1Q13488 830 aa12□□□□□ -0.49
SSPN-202ENST00000422622 CHGBP05060 677 aa12□□□□□ -0.49
SSPN-202ENST00000422622 DLG5Q8TDM6 1919 aa11.99□□□□□ -0.49
SSPN-202ENST00000422622 ITGA6P23229 1130 aa11.99□□□□□ -0.49
SSPN-202ENST00000422622 CRKLP46109 303 aaKnown RBP11.99□□□□□ -0.49
SSPN-202ENST00000422622 NFAT5O94916 1531 aa11.99□□□□□ -0.49
SSPN-202ENST00000422622 SSFA2P28290 1259 aa11.99□□□□□ -0.49
SSPN-202ENST00000422622 TNNI3KQ59H18 835 aa11.99□□□□□ -0.49
SSPN-202ENST00000422622 ZGPATQ8N5A5 531 aaKnown RBP11.99□□□□□ -0.49
SSPN-202ENST00000422622 SEC62Q99442 399 aaKnown RBP11.99□□□□□ -0.49
SSPN-202ENST00000422622 FPGT-TNNI3KV9GXZ4 949 aa11.99□□□□□ -0.49
SSPN-202ENST00000422622 GNL2Q13823 731 aaKnown RBP11.99□□□□□ -0.49
SSPN-202ENST00000422622 SKOR2Q2VWA4 1001 aaPredicted RBP11.99□□□□□ -0.49
SSPN-202ENST00000422622 MARCH10Q8NA82 808 aaPredicted RBP11.99□□□□□ -0.49
SSPN-202ENST00000422622 CCDC191Q8NCU4 936 aa11.99□□□□□ -0.49
SSPN-202ENST00000422622 DCCP43146 1447 aa11.99□□□□□ -0.49
SSPN-202ENST00000422622 A0A1B0GUL7 405 aa11.98□□□□□ -0.49
SSPN-202ENST00000422622 EVI5LQ96CN4 794 aa11.98□□□□□ -0.49
SSPN-202ENST00000422622 NASPP49321 788 aaPredicted RBP11.98□□□□□ -0.49
SSPN-202ENST00000422622 SLC4A8Q2Y0W8 1093 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms