RNA–Protein interactions for RNA: ENST00000421324.4

AC012560.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC012560.1, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012560.1-202ENST00000421324 PHKG2P15735 406 aa10.16□□□□□ -0.78
AC012560.1-202ENST00000421324 HMGB2P26583 209 aaKnown RBP10.16□□□□□ -0.78
AC012560.1-202ENST00000421324 KRI1Q8N9T8 703 aaKnown RBP10.16□□□□□ -0.78
AC012560.1-202ENST00000421324 PLEKHG2Q9H7P9 1386 aa10.15□□□□□ -0.78
AC012560.1-202ENST00000421324 SLC15A2Q16348 729 aa10.15□□□□□ -0.78
AC012560.1-202ENST00000421324 C1orf141Q5JVX7 400 aa10.15□□□□□ -0.78
AC012560.1-202ENST00000421324 PPP1R18Q6NYC8 613 aa10.15□□□□□ -0.78
AC012560.1-202ENST00000421324 ZNF530Q6P9A1 599 aaPredicted RBP10.15□□□□□ -0.78
AC012560.1-202ENST00000421324 AEBP1Q8IUX7 1158 aa10.15□□□□□ -0.78
AC012560.1-202ENST00000421324 SMARCC1Q92922 1105 aaPredicted RBP10.15□□□□□ -0.78
AC012560.1-202ENST00000421324 REPIN1Q9BWE0 567 aaKnown RBP10.15□□□□□ -0.78
AC012560.1-202ENST00000421324 NHSQ6T4R5 1651 aa10.15□□□□□ -0.79
AC012560.1-202ENST00000421324 U2SURPO15042 1029 aaKnown RBP10.14□□□□□ -0.79
AC012560.1-202ENST00000421324 HMOX1P09601 288 aa10.14□□□□□ -0.79
AC012560.1-202ENST00000421324 FUT2Q10981 343 aa10.14□□□□□ -0.79
AC012560.1-202ENST00000421324 PUS10Q3MIT2 529 aaKnown RBP10.14□□□□□ -0.79
AC012560.1-202ENST00000421324 SCUBE3Q8IX30 993 aa10.14□□□□□ -0.79
AC012560.1-202ENST00000421324 DCAF5Q96JK2 942 aa10.14□□□□□ -0.79
AC012560.1-202ENST00000421324 GPCPD1Q9NPB8 672 aa10.14□□□□□ -0.79
AC012560.1-202ENST00000421324 TMOD3Q9NYL9 352 aa10.14□□□□□ -0.79
AC012560.1-202ENST00000421324 NUDCQ9Y266 331 aa10.14□□□□□ -0.79
AC012560.1-202ENST00000421324 TLL1O43897 1013 aa10.13□□□□□ -0.79
AC012560.1-202ENST00000421324 NR1I2O75469 434 aa10.13□□□□□ -0.79
AC012560.1-202ENST00000421324 PPP2R1AP30153 589 aa10.13□□□□□ -0.79
AC012560.1-202ENST00000421324 CLCN1P35523 988 aa10.13□□□□□ -0.79
AC012560.1-202ENST00000421324 DDX10Q13206 875 aaKnown RBP10.13□□□□□ -0.79
AC012560.1-202ENST00000421324 MORN1Q5T089 497 aa10.13□□□□□ -0.79
AC012560.1-202ENST00000421324 PIGBQ92521 554 aa10.13□□□□□ -0.79
AC012560.1-202ENST00000421324 LRRC4BQ9NT99 713 aa10.13□□□□□ -0.79
AC012560.1-202ENST00000421324 FAM217BQ9NTX9 383 aaPredicted RBP10.13□□□□□ -0.79
AC012560.1-202ENST00000421324 CCNL1Q9UK58 526 aaPredicted RBP10.13□□□□□ -0.79
AC012560.1-202ENST00000421324 RGPD3A6NKT7 1758 aaPredicted RBP10.12□□□□□ -0.79
AC012560.1-202ENST00000421324 RGPD4Q7Z3J3 1758 aa10.12□□□□□ -0.79
AC012560.1-202ENST00000421324 ERVV-2B6SEH9 535 aa10.12□□□□□ -0.79
AC012560.1-202ENST00000421324 KCNQ4P56696 695 aa10.12□□□□□ -0.79
AC012560.1-202ENST00000421324 CABP4P57796 275 aa10.12□□□□□ -0.79
AC012560.1-202ENST00000421324 AMHR2Q16671 573 aa10.12□□□□□ -0.79
AC012560.1-202ENST00000421324 SPON1Q9HCB6 807 aa10.12□□□□□ -0.79
AC012560.1-202ENST00000421324 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.12□□□□□ -0.79
AC012560.1-202ENST00000421324 KDRP35968 1356 aa10.12□□□□□ -0.79
AC012560.1-202ENST00000421324 RREB1Q92766 1687 aa10.12□□□□□ -0.79
AC012560.1-202ENST00000421324 ATP6V1AP38606 617 aa10.11□□□□□ -0.79
AC012560.1-202ENST00000421324 TFCP2L1Q9NZI6 479 aa10.11□□□□□ -0.79
AC012560.1-202ENST00000421324 BTAF1O14981 1849 aa10.11□□□□□ -0.79
AC012560.1-202ENST00000421324 NUP188Q5SRE5 1749 aa10.1□□□□□ -0.79
AC012560.1-202ENST00000421324 AKAP4Q5JQC9 854 aa10.1□□□□□ -0.79
AC012560.1-202ENST00000421324 PALLDQ8WX93 1383 aa10.1□□□□□ -0.79
AC012560.1-202ENST00000421324 PKD1L3Q7Z443 1732 aa10.1□□□□□ -0.79
AC012560.1-202ENST00000421324 SHANK3Q9BYB0 1731 aa10.1□□□□□ -0.79
AC012560.1-202ENST00000421324 U2AF1L5P0DN76 240 aaPredicted RBP10.09□□□□□ -0.79
AC012560.1-202ENST00000421324 U2AF1Q01081 240 aaKnown RBP eCLIP10.09□□□□□ -0.79
AC012560.1-202ENST00000421324 RALBP1Q15311 655 aa10.09□□□□□ -0.79
AC012560.1-202ENST00000421324 THAP11Q96EK4 314 aa10.09□□□□□ -0.79
AC012560.1-202ENST00000421324 PPP1R1BQ9UD71 204 aaPredicted RBP10.09□□□□□ -0.79
AC012560.1-202ENST00000421324 ASAP1Q9ULH1 1129 aa10.09□□□□□ -0.79
AC012560.1-202ENST00000421324 DOT1LQ8TEK3 1739 aa10.09□□□□□ -0.79
AC012560.1-202ENST00000421324 LOC102724428A0A0B4J2F2 783 aa10.08□□□□□ -0.8
AC012560.1-202ENST00000421324 TRIM66O15016 1216 aa10.08□□□□□ -0.8
AC012560.1-202ENST00000421324 ZBTB7AO95365 584 aa10.08□□□□□ -0.8
AC012560.1-202ENST00000421324 ADH1BP00325 375 aa10.08□□□□□ -0.8
AC012560.1-202ENST00000421324 SIK1P57059 783 aa10.08□□□□□ -0.8
AC012560.1-202ENST00000421324 ZNF827Q17R98 1081 aa10.08□□□□□ -0.8
AC012560.1-202ENST00000421324 MTHFSDQ2M296 383 aaKnown RBP10.08□□□□□ -0.8
AC012560.1-202ENST00000421324 NFATC2IPQ8NCF5 419 aa10.08□□□□□ -0.8
AC012560.1-202ENST00000421324 AK7Q96M32 723 aa10.08□□□□□ -0.8
AC012560.1-202ENST00000421324 PDGFDQ9GZP0 370 aaPredicted RBP10.08□□□□□ -0.8
AC012560.1-202ENST00000421324 ATG3Q9NT62 314 aa10.08□□□□□ -0.8
AC012560.1-202ENST00000421324 SLC27A5Q9Y2P5 690 aa10.08□□□□□ -0.8
AC012560.1-202ENST00000421324 FLAD1Q8NFF5 587 aa10.07□□□□□ -0.8
AC012560.1-202ENST00000421324 GAS2L2Q8NHY3 880 aa10.07□□□□□ -0.8
AC012560.1-202ENST00000421324 SLC16A10Q8TF71 515 aa10.07□□□□□ -0.8
AC012560.1-202ENST00000421324 MTFR1LQ9H019 292 aa10.07□□□□□ -0.8
AC012560.1-202ENST00000421324 GNAT3A8MTJ3 354 aa10.06□□□□□ -0.8
AC012560.1-202ENST00000421324 RNMTO43148 476 aaKnown RBP10.06□□□□□ -0.8
AC012560.1-202ENST00000421324 KDM4AO75164 1064 aa10.06□□□□□ -0.8
AC012560.1-202ENST00000421324 NEFMP07197 916 aa10.06□□□□□ -0.8
AC012560.1-202ENST00000421324 PRKAR2BP31323 418 aa10.06□□□□□ -0.8
AC012560.1-202ENST00000421324 LGR6Q9HBX8 967 aa10.06□□□□□ -0.8
AC012560.1-202ENST00000421324 SALL2Q9Y467 1007 aaPredicted RBP10.06□□□□□ -0.8
AC012560.1-202ENST00000421324 COL3A1P02461 1466 aaPredicted RBP10.05□□□□□ -0.8
AC012560.1-202ENST00000421324 RNF223E7ERA6 249 aa10.05□□□□□ -0.8
AC012560.1-202ENST00000421324 PTCD1O75127 700 aaKnown RBP10.05□□□□□ -0.8
AC012560.1-202ENST00000421324 SSTR3P32745 418 aaPredicted RBP10.05□□□□□ -0.8
AC012560.1-202ENST00000421324 GGCXP38435 758 aa10.05□□□□□ -0.8
AC012560.1-202ENST00000421324 PNNQ9H307 717 aaKnown RBP10.05□□□□□ -0.8
AC012560.1-202ENST00000421324 SLC52A2Q9HAB3 445 aa10.05□□□□□ -0.8
AC012560.1-202ENST00000421324 PNPLA7Q6ZV29 1317 aa10.05□□□□□ -0.8
AC012560.1-202ENST00000421324 S1PR4O95977 384 aa10.04□□□□□ -0.8
AC012560.1-202ENST00000421324 TEFQ10587 303 aa10.04□□□□□ -0.8
AC012560.1-202ENST00000421324 BRICD5Q6PL45 260 aa10.04□□□□□ -0.8
AC012560.1-202ENST00000421324 PHACTR3Q96KR7 559 aa10.04□□□□□ -0.8
AC012560.1-202ENST00000421324 SPSB2Q99619 263 aa10.04□□□□□ -0.8
AC012560.1-202ENST00000421324 RSPH6AQ9H0K4 717 aa10.04□□□□□ -0.8
AC012560.1-202ENST00000421324 ITGB4P16144 1822 aa10.04□□□□□ -0.8
AC012560.1-202ENST00000421324 KDM6AO15550 1401 aaPredicted RBP10.04□□□□□ -0.8
AC012560.1-202ENST00000421324 LRP5O75197 1615 aa10.04□□□□□ -0.8
AC012560.1-202ENST00000421324 LY75O60449 1722 aa10.03□□□□□ -0.8
AC012560.1-202ENST00000421324 POLD1P28340 1107 aa10.03□□□□□ -0.8
AC012560.1-202ENST00000421324 ITPK1Q13572 414 aa10.03□□□□□ -0.8
AC012560.1-202ENST00000421324 GRIPAP1Q4V328 841 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms