RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 NBPF10Q6P3W6 841 aaKnown RBP9.03□□□□□ -0.96
BDNF-209ENST00000420794 NBPF15Q8N660 670 aa9.03□□□□□ -0.96
BDNF-209ENST00000420794 STK32BQ9NY57 414 aa9.03□□□□□ -0.96
BDNF-209ENST00000420794 RBM19Q9Y4C8 960 aaKnown RBP9.03□□□□□ -0.96
BDNF-209ENST00000420794 KDM2BQ8NHM5 1336 aa9.02□□□□□ -0.96
BDNF-209ENST00000420794 RPS6KA4O75676 772 aa9.02□□□□□ -0.96
BDNF-209ENST00000420794 PCCAP05165 728 aaPredicted RBP9.02□□□□□ -0.96
BDNF-209ENST00000420794 ZBTB38Q8NAP3 1195 aaPredicted RBP9.02□□□□□ -0.96
BDNF-209ENST00000420794 RGPD1P0DJD0 1748 aa9.02□□□□□ -0.97
BDNF-209ENST00000420794 PDE8AO60658 829 aa9.02□□□□□ -0.97
BDNF-209ENST00000420794 GLRX3O76003 335 aaKnown RBP9.02□□□□□ -0.97
BDNF-209ENST00000420794 IL15P40933 162 aaPredicted RBP9.02□□□□□ -0.97
BDNF-209ENST00000420794 COL16A1Q07092 1604 aaPredicted RBP9.02□□□□□ -0.97
BDNF-209ENST00000420794 KCNQ4P56696 695 aa9.02□□□□□ -0.97
BDNF-209ENST00000420794 DDX46Q7L014 1031 aaKnown RBP9.02□□□□□ -0.97
BDNF-209ENST00000420794 NUTM1Q86Y26 1132 aa9.02□□□□□ -0.97
BDNF-209ENST00000420794 TSHZ2Q9NRE2 1034 aa9.02□□□□□ -0.97
BDNF-209ENST00000420794 TTC39AQ5SRH9 613 aa9.02□□□□□ -0.97
BDNF-209ENST00000420794 CLEC4GQ6UXB4 293 aa9.02□□□□□ -0.97
BDNF-209ENST00000420794 SSH3Q8TE77 659 aa9.02□□□□□ -0.97
BDNF-209ENST00000420794 RPGRQ92834 1020 aaKnown RBP9.02□□□□□ -0.97
BDNF-209ENST00000420794 GNL3LQ9NVN8 582 aaKnown RBP9.02□□□□□ -0.97
BDNF-209ENST00000420794 PNMA6EA0A0J9YXQ4 647 aa9.01□□□□□ -0.97
BDNF-209ENST00000420794 HIP1O00291 1037 aa9.01□□□□□ -0.97
BDNF-209ENST00000420794 PDIA6Q15084 440 aa9.01□□□□□ -0.97
BDNF-209ENST00000420794 RC3H1Q5TC82 1133 aaKnown RBP9.01□□□□□ -0.97
BDNF-209ENST00000420794 ANP32EQ9BTT0 268 aa9.01□□□□□ -0.97
BDNF-209ENST00000420794 PARP4Q9UKK3 1724 aaKnown RBP9.01□□□□□ -0.97
BDNF-209ENST00000420794 ADCY9O60503 1353 aa9.01□□□□□ -0.97
BDNF-209ENST00000420794 IFIT1P09914 478 aaKnown RBP9.01□□□□□ -0.97
BDNF-209ENST00000420794 FSD1Q9BTV5 496 aa9.01□□□□□ -0.97
BDNF-209ENST00000420794 PA2G4Q9UQ80 394 aaKnown RBP9.01□□□□□ -0.97
BDNF-209ENST00000420794 IGKV5-2P06315 115 aa9□□□□□ -0.97
BDNF-209ENST00000420794 USPL1Q5W0Q7 1092 aa9□□□□□ -0.97
BDNF-209ENST00000420794 ECHDC1Q9NTX5 307 aa9□□□□□ -0.97
BDNF-209ENST00000420794 BCL9LQ86UU0 1499 aa9□□□□□ -0.97
BDNF-209ENST00000420794 ADRA2BP18089 450 aa9□□□□□ -0.97
BDNF-209ENST00000420794 ANKRD18AQ8IVF6 992 aa9□□□□□ -0.97
BDNF-209ENST00000420794 DNAJC2Q99543 621 aaKnown RBP9□□□□□ -0.97
BDNF-209ENST00000420794 DISP2A7MBM2 1401 aa9□□□□□ -0.97
BDNF-209ENST00000420794 EIF5P55010 431 aaKnown RBP9□□□□□ -0.97
BDNF-209ENST00000420794 PDE4CQ08493 712 aa9□□□□□ -0.97
BDNF-209ENST00000420794 TRIM28Q13263 835 aaKnown RBP9□□□□□ -0.97
BDNF-209ENST00000420794 BMP2KLQ5H9B9 411 aa9□□□□□ -0.97
BDNF-209ENST00000420794 CNBD1Q8NA66 436 aa9□□□□□ -0.97
BDNF-209ENST00000420794 CCDC8Q9H0W5 538 aaPredicted RBP9□□□□□ -0.97
BDNF-209ENST00000420794 NLRP10Q86W26 655 aa8.99□□□□□ -0.97
BDNF-209ENST00000420794 SKAP1Q86WV1 359 aa8.99□□□□□ -0.97
BDNF-209ENST00000420794 PARP3Q9Y6F1 533 aa8.99□□□□□ -0.97
BDNF-209ENST00000420794 COL15A1P39059 1388 aa8.99□□□□□ -0.97
BDNF-209ENST00000420794 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.99□□□□□ -0.97
BDNF-209ENST00000420794 HCLS1P14317 486 aaPredicted RBP8.99□□□□□ -0.97
BDNF-209ENST00000420794 TXNRD1Q16881 649 aa8.99□□□□□ -0.97
BDNF-209ENST00000420794 BACH2Q9BYV9 841 aa8.99□□□□□ -0.97
BDNF-209ENST00000420794 ATP10DQ9P241 1426 aa8.99□□□□□ -0.97
BDNF-209ENST00000420794 PXDNLA1KZ92 1463 aa8.99□□□□□ -0.97
BDNF-209ENST00000420794 SLC5A1P13866 664 aa8.99□□□□□ -0.97
BDNF-209ENST00000420794 FGD1P98174 961 aa8.99□□□□□ -0.97
BDNF-209ENST00000420794 ITPK1Q13572 414 aa8.99□□□□□ -0.97
BDNF-209ENST00000420794 DLG5Q8TDM6 1919 aa8.98□□□□□ -0.97
BDNF-209ENST00000420794 H7C1W4 665 aa8.98□□□□□ -0.97
BDNF-209ENST00000420794 EYA2O00167 538 aa8.98□□□□□ -0.97
BDNF-209ENST00000420794 HSCBQ8IWL3 235 aa8.98□□□□□ -0.97
BDNF-209ENST00000420794 ANO2Q9NQ90 1003 aa8.98□□□□□ -0.97
BDNF-209ENST00000420794 NARFQ9UHQ1 456 aa8.98□□□□□ -0.97
BDNF-209ENST00000420794 RGPD5Q99666 1765 aa8.98□□□□□ -0.97
BDNF-209ENST00000420794 A0A0U1RQG5 324 aaPredicted RBP8.98□□□□□ -0.97
BDNF-209ENST00000420794 ITGA6P23229 1130 aa8.98□□□□□ -0.97
BDNF-209ENST00000420794 NLGN1Q8N2Q7 840 aa8.98□□□□□ -0.97
BDNF-209ENST00000420794 ISCA1Q9BUE6 129 aa8.98□□□□□ -0.97
BDNF-209ENST00000420794 CNTNAP4Q9C0A0 1308 aa8.98□□□□□ -0.97
BDNF-209ENST00000420794 PDE1AP54750 535 aa8.98□□□□□ -0.97
BDNF-209ENST00000420794 HLFQ16534 295 aa8.98□□□□□ -0.97
BDNF-209ENST00000420794 KLHL34Q8N239 644 aa8.98□□□□□ -0.97
BDNF-209ENST00000420794 CTSWP56202 376 aa8.98□□□□□ -0.97
BDNF-209ENST00000420794 CAVIN4Q5BKX8 364 aa8.98□□□□□ -0.97
BDNF-209ENST00000420794 TTC22Q5TAA0 569 aa8.97□□□□□ -0.97
BDNF-209ENST00000420794 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.97□□□□□ -0.97
BDNF-209ENST00000420794 FBXO3Q9UK99 471 aa8.97□□□□□ -0.97
BDNF-209ENST00000420794 FKBP4Q02790 459 aaKnown RBP eCLIP8.97□□□□□ -0.97
BDNF-209ENST00000420794 LINC00116Q8NCU8 138 aa8.97□□□□□ -0.97
BDNF-209ENST00000420794 BOLA2Q9H3K6 86 aa8.97□□□□□ -0.97
BDNF-209ENST00000420794 RGPD2P0DJD1 1756 aa8.97□□□□□ -0.97
BDNF-209ENST00000420794 ATP2B3Q16720 1220 aa8.97□□□□□ -0.97
BDNF-209ENST00000420794 COPRSQ9NQ92 184 aa8.97□□□□□ -0.97
BDNF-209ENST00000420794 ANKIB1Q9P2G1 1089 aa8.97□□□□□ -0.97
BDNF-209ENST00000420794 TTC41PQ6P2S7 1318 aa8.97□□□□□ -0.97
BDNF-209ENST00000420794 COL22A1Q8NFW1 1626 aaPredicted RBP8.96□□□□□ -0.97
BDNF-209ENST00000420794 ONECUT3O60422 494 aaPredicted RBP8.96□□□□□ -0.97
BDNF-209ENST00000420794 MTX1Q13505 466 aa8.96□□□□□ -0.97
BDNF-209ENST00000420794 WASHC4Q2M389 1173 aa8.96□□□□□ -0.97
BDNF-209ENST00000420794 ZSCAN25Q6NSZ9 544 aa8.96□□□□□ -0.97
BDNF-209ENST00000420794 SIRT2Q8IXJ6 389 aa8.96□□□□□ -0.97
BDNF-209ENST00000420794 C16orf71Q8IYS4 520 aaPredicted RBP8.96□□□□□ -0.97
BDNF-209ENST00000420794 MAP4K4O95819 1239 aaPredicted RBP8.96□□□□□ -0.98
BDNF-209ENST00000420794 ZKSCAN1P17029 563 aaPredicted RBP8.96□□□□□ -0.98
BDNF-209ENST00000420794 SSFA2P28290 1259 aa8.96□□□□□ -0.98
BDNF-209ENST00000420794 TFCP2Q12800 502 aa8.96□□□□□ -0.98
BDNF-209ENST00000420794 PLEKHM2Q8IWE5 1019 aa8.96□□□□□ -0.98
BDNF-209ENST00000420794 KLHDC4Q8TBB5 520 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms