RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 IL17REQ8NFR9 667 aa14.28□□□□□ -0.12
RAPGEF1-205ENST00000419442 GPRC5DQ9NZD1 345 aa14.28□□□□□ -0.12
RAPGEF1-205ENST00000419442 AKAP11Q9UKA4 1901 aa14.28□□□□□ -0.12
RAPGEF1-205ENST00000419442 RIC1Q4ADV7 1423 aa14.27□□□□□ -0.12
RAPGEF1-205ENST00000419442 TEFQ10587 303 aa14.27□□□□□ -0.13
RAPGEF1-205ENST00000419442 ZIC5Q96T25 663 aa14.27□□□□□ -0.13
RAPGEF1-205ENST00000419442 SAGE1Q9NXZ1 904 aa14.27□□□□□ -0.13
RAPGEF1-205ENST00000419442 CEMIPQ8WUJ3 1361 aa14.26□□□□□ -0.13
RAPGEF1-205ENST00000419442 LARGE2Q8N3Y3 721 aa14.26□□□□□ -0.13
RAPGEF1-205ENST00000419442 GLIS2Q9BZE0 524 aaPredicted RBP14.26□□□□□ -0.13
RAPGEF1-205ENST00000419442 NIP7Q9Y221 180 aaKnown RBP eCLIP14.26□□□□□ -0.13
RAPGEF1-205ENST00000419442 ABCC12Q96J65 1359 aa14.25□□□□□ -0.13
RAPGEF1-205ENST00000419442 HOXA10P31260 410 aaPredicted RBP14.25□□□□□ -0.13
RAPGEF1-205ENST00000419442 ZC3H15Q8WU90 426 aaKnown RBP14.25□□□□□ -0.13
RAPGEF1-205ENST00000419442 USP16Q9Y5T5 823 aa14.25□□□□□ -0.13
RAPGEF1-205ENST00000419442 NUP98P52948 1817 aa14.25□□□□□ -0.13
RAPGEF1-205ENST00000419442 KIF7Q2M1P5 1343 aa14.24□□□□□ -0.13
RAPGEF1-205ENST00000419442 CDHR2Q9BYE9 1310 aa14.24□□□□□ -0.13
RAPGEF1-205ENST00000419442 POLR3GLQ9BT43 218 aa14.24□□□□□ -0.13
RAPGEF1-205ENST00000419442 NPC1L1Q9UHC9 1359 aa14.23□□□□□ -0.13
RAPGEF1-205ENST00000419442 GNAT3A8MTJ3 354 aa14.23□□□□□ -0.13
RAPGEF1-205ENST00000419442 FAM155AB1AL88 458 aaPredicted RBP14.23□□□□□ -0.13
RAPGEF1-205ENST00000419442 KCNQ3O43525 872 aa14.23□□□□□ -0.13
RAPGEF1-205ENST00000419442 PIP4K2AP48426 406 aaPredicted RBP14.23□□□□□ -0.13
RAPGEF1-205ENST00000419442 NIM1KQ8IY84 436 aa14.23□□□□□ -0.13
RAPGEF1-205ENST00000419442 VPS33BQ9H267 617 aa14.23□□□□□ -0.13
RAPGEF1-205ENST00000419442 NBPF26B4DH59 902 aa14.22□□□□□ -0.13
RAPGEF1-205ENST00000419442 NBPF10Q6P3W6 841 aaKnown RBP14.22□□□□□ -0.13
RAPGEF1-205ENST00000419442 CDC37L1Q7L3B6 337 aa14.22□□□□□ -0.13
RAPGEF1-205ENST00000419442 NBPF15Q8N660 670 aa14.22□□□□□ -0.13
RAPGEF1-205ENST00000419442 LAMB4A4D0S4 1761 aa14.22□□□□□ -0.13
RAPGEF1-205ENST00000419442 IBTKQ9P2D0 1353 aaPredicted RBP14.22□□□□□ -0.13
RAPGEF1-205ENST00000419442 HIRAP54198 1017 aaPredicted RBP14.21□□□□□ -0.13
RAPGEF1-205ENST00000419442 CXCL9Q07325 125 aa14.21□□□□□ -0.13
RAPGEF1-205ENST00000419442 GAS2L2Q8NHY3 880 aa14.21□□□□□ -0.13
RAPGEF1-205ENST00000419442 CRAMP1Q96RY5 1269 aa14.21□□□□□ -0.13
RAPGEF1-205ENST00000419442 POLR2AP24928 1970 aaKnown RBP14.21□□□□□ -0.13
RAPGEF1-205ENST00000419442 COL3A1P02461 1466 aaPredicted RBP14.2□□□□□ -0.14
RAPGEF1-205ENST00000419442 PRAMEF22A3QJZ6 481 aa14.2□□□□□ -0.14
RAPGEF1-205ENST00000419442 FAM177BA6PVY3 158 aa14.2□□□□□ -0.14
RAPGEF1-205ENST00000419442 PPIP5K2O43314 1243 aa14.2□□□□□ -0.14
RAPGEF1-205ENST00000419442 GMPSP49915 693 aaPredicted RBP14.2□□□□□ -0.14
RAPGEF1-205ENST00000419442 HUNKP57058 714 aa14.2□□□□□ -0.14
RAPGEF1-205ENST00000419442 HLFQ16534 295 aa14.2□□□□□ -0.14
RAPGEF1-205ENST00000419442 AMER1Q5JTC6 1135 aaPredicted RBP14.2□□□□□ -0.14
RAPGEF1-205ENST00000419442 RGMBQ6NW40 437 aa14.2□□□□□ -0.14
RAPGEF1-205ENST00000419442 CTU1Q7Z7A3 348 aaKnown RBP14.2□□□□□ -0.14
RAPGEF1-205ENST00000419442 SLC51AQ86UW1 340 aa14.2□□□□□ -0.14
RAPGEF1-205ENST00000419442 GCC1Q96CN9 775 aa14.2□□□□□ -0.14
RAPGEF1-205ENST00000419442 NYXQ9GZU5 481 aa14.2□□□□□ -0.14
RAPGEF1-205ENST00000419442 ZNF408Q9H9D4 720 aa14.2□□□□□ -0.14
RAPGEF1-205ENST00000419442 ZNRF3Q9ULT6 936 aa14.2□□□□□ -0.14
RAPGEF1-205ENST00000419442 DIAPH1O60610 1272 aaKnown RBP14.19□□□□□ -0.14
RAPGEF1-205ENST00000419442 RNF186Q9NXI6 227 aa14.19□□□□□ -0.14
RAPGEF1-205ENST00000419442 BTBD11A6QL63 1104 aa14.18□□□□□ -0.14
RAPGEF1-205ENST00000419442 PPEF1O14829 653 aaPredicted RBP14.18□□□□□ -0.14
RAPGEF1-205ENST00000419442 SNRPA1P09661 255 aaKnown RBP14.18□□□□□ -0.14
RAPGEF1-205ENST00000419442 GTF2E1P29083 439 aaPredicted RBP14.18□□□□□ -0.14
RAPGEF1-205ENST00000419442 KIF23Q02241 960 aaPredicted RBP14.18□□□□□ -0.14
RAPGEF1-205ENST00000419442 AOC3Q16853 763 aa14.18□□□□□ -0.14
RAPGEF1-205ENST00000419442 NUTM1Q86Y26 1132 aa14.18□□□□□ -0.14
RAPGEF1-205ENST00000419442 TRPM4Q8TD43 1214 aa14.18□□□□□ -0.14
RAPGEF1-205ENST00000419442 RPGRQ92834 1020 aaKnown RBP14.18□□□□□ -0.14
RAPGEF1-205ENST00000419442 RTFDC1Q9BY42 306 aaPredicted RBP14.18□□□□□ -0.14
RAPGEF1-205ENST00000419442 CCDC102AQ96A19 550 aa14.17□□□□□ -0.14
RAPGEF1-205ENST00000419442 HPS5Q9UPZ3 1129 aa14.17□□□□□ -0.14
RAPGEF1-205ENST00000419442 KNSTRNQ9Y448 316 aa14.17□□□□□ -0.14
RAPGEF1-205ENST00000419442 TRPA1O75762 1119 aa14.16□□□□□ -0.14
RAPGEF1-205ENST00000419442 RBM17Q96I25 401 aaKnown RBP14.16□□□□□ -0.14
RAPGEF1-205ENST00000419442 ATP6V0A2Q9Y487 856 aa14.16□□□□□ -0.14
RAPGEF1-205ENST00000419442 LAMB2P55268 1798 aa14.15□□□□□ -0.14
RAPGEF1-205ENST00000419442 ERVV-1B6SEH8 477 aa14.15□□□□□ -0.14
RAPGEF1-205ENST00000419442 PKN2Q16513 984 aaKnown RBP14.15□□□□□ -0.14
RAPGEF1-205ENST00000419442 USP48Q86UV5 1035 aa14.15□□□□□ -0.14
RAPGEF1-205ENST00000419442 SUPT20HQ8NEM7 779 aa14.15□□□□□ -0.14
RAPGEF1-205ENST00000419442 GBA2Q9HCG7 927 aaPredicted RBP14.15□□□□□ -0.14
RAPGEF1-205ENST00000419442 ANKRD36CQ5JPF3 1778 aa14.14□□□□□ -0.15
RAPGEF1-205ENST00000419442 SLC10A3P09131 477 aa14.14□□□□□ -0.15
RAPGEF1-205ENST00000419442 KIAA2012Q0VF49 1180 aa14.14□□□□□ -0.15
RAPGEF1-205ENST00000419442 TNIP1Q15025 636 aa14.14□□□□□ -0.15
RAPGEF1-205ENST00000419442 HABP4Q5JVS0 413 aaKnown RBP14.14□□□□□ -0.15
RAPGEF1-205ENST00000419442 CSRNP1Q96S65 589 aa14.14□□□□□ -0.15
RAPGEF1-205ENST00000419442 CNOT7Q9UIV1 285 aaKnown RBP14.14□□□□□ -0.15
RAPGEF1-205ENST00000419442 TIMELESSQ9UNS1 1208 aa14.14□□□□□ -0.15
RAPGEF1-205ENST00000419442 UBN2Q6ZU65 1347 aa14.14□□□□□ -0.15
RAPGEF1-205ENST00000419442 SHTN1A0MZ66 631 aa14.13□□□□□ -0.15
RAPGEF1-205ENST00000419442 DLK2Q6UY11 383 aa14.13□□□□□ -0.15
RAPGEF1-205ENST00000419442 C3orf67Q6ZVT6 689 aa14.13□□□□□ -0.15
RAPGEF1-205ENST00000419442 REM2Q8IYK8 340 aaPredicted RBP14.13□□□□□ -0.15
RAPGEF1-205ENST00000419442 BCL2L13Q9BXK5 485 aa14.13□□□□□ -0.15
RAPGEF1-205ENST00000419442 DUOX1Q9NRD9 1551 aa14.13□□□□□ -0.15
RAPGEF1-205ENST00000419442 MAP3K15Q6ZN16 1313 aa14.13□□□□□ -0.15
RAPGEF1-205ENST00000419442 LRRC37AA6NMS7 1700 aa14.12□□□□□ -0.15
RAPGEF1-205ENST00000419442 TCERG1O14776 1098 aaKnown RBP14.12□□□□□ -0.15
RAPGEF1-205ENST00000419442 ZNF157P51786 506 aaPredicted RBP14.12□□□□□ -0.15
RAPGEF1-205ENST00000419442 SUSD4Q5VX71 490 aa14.12□□□□□ -0.15
RAPGEF1-205ENST00000419442 C2orf69Q8N8R5 385 aa14.12□□□□□ -0.15
RAPGEF1-205ENST00000419442 H7C1D1 291 aa14.11□□□□□ -0.15
RAPGEF1-205ENST00000419442 NPM3O75607 178 aaKnown RBP14.11□□□□□ -0.15
RAPGEF1-205ENST00000419442 RAD17O75943 681 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms