RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 TRIM28Q13263 835 aaKnown RBP23.59■■□□□ 1.37
RAB3IP-205ENST00000417413 BECN1Q14457 450 aa23.59■■□□□ 1.37
RAB3IP-205ENST00000417413 KIF6Q6ZMV9 814 aa23.59■■□□□ 1.37
RAB3IP-205ENST00000417413 CLASRPQ8N2M8 674 aaKnown RBP23.59■■□□□ 1.37
RAB3IP-205ENST00000417413 THSD7AQ9UPZ6 1657 aa23.59■■□□□ 1.37
RAB3IP-205ENST00000417413 MAP3K15Q6ZN16 1313 aa23.58■■□□□ 1.37
RAB3IP-205ENST00000417413 SMARCC1Q92922 1105 aaPredicted RBP23.58■■□□□ 1.36
RAB3IP-205ENST00000417413 ZNF330Q9Y3S2 320 aaPredicted RBP23.58■■□□□ 1.36
RAB3IP-205ENST00000417413 NUP98P52948 1817 aa23.58■■□□□ 1.36
RAB3IP-205ENST00000417413 KLHDC4Q8TBB5 520 aa23.57■■□□□ 1.36
RAB3IP-205ENST00000417413 KIF2CQ99661 725 aa23.57■■□□□ 1.36
RAB3IP-205ENST00000417413 ZBTB1Q9Y2K1 713 aa23.57■■□□□ 1.36
RAB3IP-205ENST00000417413 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.57■■□□□ 1.36
RAB3IP-205ENST00000417413 TTC41PQ6P2S7 1318 aa23.56■■□□□ 1.36
RAB3IP-205ENST00000417413 PTPN12Q05209 780 aaKnown RBP23.56■■□□□ 1.36
RAB3IP-205ENST00000417413 ZNF831Q5JPB2 1677 aa23.56■■□□□ 1.36
RAB3IP-205ENST00000417413 GIGYF2Q6Y7W6 1299 aaKnown RBP23.55■■□□□ 1.36
RAB3IP-205ENST00000417413 USP26Q9BXU7 913 aa23.55■■□□□ 1.36
RAB3IP-205ENST00000417413 TBC1D2Q9BYX2 928 aa23.55■■□□□ 1.36
RAB3IP-205ENST00000417413 LMBR1LQ6UX01 489 aa23.55■■□□□ 1.36
RAB3IP-205ENST00000417413 SIL1Q9H173 461 aa23.55■■□□□ 1.36
RAB3IP-205ENST00000417413 TRIM6-TRIM34B2RNG4 842 aa23.54■■□□□ 1.36
RAB3IP-205ENST00000417413 IL6STP40189 918 aaPredicted RBP23.54■■□□□ 1.36
RAB3IP-205ENST00000417413 RILPL2Q969X0 211 aa23.54■■□□□ 1.36
RAB3IP-205ENST00000417413 CHMLP26374 656 aa23.53■■□□□ 1.36
RAB3IP-205ENST00000417413 COL5A3P25940 1745 aaPredicted RBP23.53■■□□□ 1.36
RAB3IP-205ENST00000417413 LOC102724428A0A0B4J2F2 783 aa23.52■■□□□ 1.36
RAB3IP-205ENST00000417413 ERC2O15083 957 aa23.52■■□□□ 1.36
RAB3IP-205ENST00000417413 KCNQ2O43526 872 aa23.52■■□□□ 1.36
RAB3IP-205ENST00000417413 IFIT2P09913 472 aaKnown RBP23.52■■□□□ 1.36
RAB3IP-205ENST00000417413 SIK1P57059 783 aa23.52■■□□□ 1.36
RAB3IP-205ENST00000417413 HLFQ16534 295 aa23.52■■□□□ 1.36
RAB3IP-205ENST00000417413 INTS5Q6P9B9 1019 aaKnown RBP23.52■■□□□ 1.36
RAB3IP-205ENST00000417413 AACSQ86V21 672 aa23.52■■□□□ 1.36
RAB3IP-205ENST00000417413 EAF2Q96CJ1 260 aaPredicted RBP23.52■■□□□ 1.36
RAB3IP-205ENST00000417413 MYH14Q7Z406 1995 aaKnown RBP23.52■■□□□ 1.36
RAB3IP-205ENST00000417413 RXRBP28702 533 aa23.51■■□□□ 1.35
RAB3IP-205ENST00000417413 RTL5Q5HYW3 569 aaPredicted RBP23.51■■□□□ 1.35
RAB3IP-205ENST00000417413 ECHDC1Q9NTX5 307 aa23.51■■□□□ 1.35
RAB3IP-205ENST00000417413 PALLDQ8WX93 1383 aa23.51■■□□□ 1.35
RAB3IP-205ENST00000417413 GLRX3O76003 335 aaKnown RBP23.51■■□□□ 1.35
RAB3IP-205ENST00000417413 PCCAP05165 728 aaPredicted RBP23.51■■□□□ 1.35
RAB3IP-205ENST00000417413 ATP6V1AP38606 617 aa23.51■■□□□ 1.35
RAB3IP-205ENST00000417413 KRT27Q7Z3Y8 459 aa23.51■■□□□ 1.35
RAB3IP-205ENST00000417413 ESYT1Q9BSJ8 1104 aa23.51■■□□□ 1.35
RAB3IP-205ENST00000417413 ERVV-1B6SEH8 477 aa23.5■■□□□ 1.35
RAB3IP-205ENST00000417413 REC8O95072 547 aa23.5■■□□□ 1.35
RAB3IP-205ENST00000417413 EIF5P55010 431 aaKnown RBP23.5■■□□□ 1.35
RAB3IP-205ENST00000417413 ITPK1Q13572 414 aa23.5■■□□□ 1.35
RAB3IP-205ENST00000417413 CCDC87Q9NVE4 849 aa23.5■■□□□ 1.35
RAB3IP-205ENST00000417413 HSP90AB3PQ58FF7 597 aa23.49■■□□□ 1.35
RAB3IP-205ENST00000417413 FAM196AQ6ZSG2 479 aa23.49■■□□□ 1.35
RAB3IP-205ENST00000417413 MAP4K4O95819 1239 aaPredicted RBP23.48■■□□□ 1.35
RAB3IP-205ENST00000417413 CRKLP46109 303 aaKnown RBP23.48■■□□□ 1.35
RAB3IP-205ENST00000417413 SNX21Q969T3 373 aa23.48■■□□□ 1.35
RAB3IP-205ENST00000417413 GPATCH3Q96I76 525 aa23.48■■□□□ 1.35
RAB3IP-205ENST00000417413 ARXQ96QS3 562 aa23.48■■□□□ 1.35
RAB3IP-205ENST00000417413 PLA2G12BQ9BX93 195 aa23.48■■□□□ 1.35
RAB3IP-205ENST00000417413 NLRP10Q86W26 655 aa23.48■■□□□ 1.35
RAB3IP-205ENST00000417413 DZIP3Q86Y13 1208 aaKnown RBP23.48■■□□□ 1.35
RAB3IP-205ENST00000417413 ZBTB38Q8NAP3 1195 aaPredicted RBP23.48■■□□□ 1.35
RAB3IP-205ENST00000417413 CCDC8Q9H0W5 538 aaPredicted RBP23.48■■□□□ 1.35
RAB3IP-205ENST00000417413 CNTROBQ8N137 903 aa23.47■■□□□ 1.35
RAB3IP-205ENST00000417413 TLR7Q9NYK1 1049 aaKnown RBP23.47■■□□□ 1.35
RAB3IP-205ENST00000417413 TFCP2Q12800 502 aa23.46■■□□□ 1.35
RAB3IP-205ENST00000417413 TBC1D2BQ9UPU7 963 aa23.46■■□□□ 1.35
RAB3IP-205ENST00000417413 CHMP3Q9Y3E7 222 aa23.46■■□□□ 1.35
RAB3IP-205ENST00000417413 NHSQ6T4R5 1651 aa23.46■■□□□ 1.35
RAB3IP-205ENST00000417413 CDHR2Q9BYE9 1310 aa23.46■■□□□ 1.35
RAB3IP-205ENST00000417413 MYH3P11055 1940 aa23.45■■□□□ 1.35
RAB3IP-205ENST00000417413 FAM89AQ96GI7 184 aa23.45■■□□□ 1.34
RAB3IP-205ENST00000417413 BTAF1O14981 1849 aa23.45■■□□□ 1.34
RAB3IP-205ENST00000417413 ATG9AQ7Z3C6 839 aa23.44■■□□□ 1.34
RAB3IP-205ENST00000417413 GPTP24298 496 aa23.44■■□□□ 1.34
RAB3IP-205ENST00000417413 TNNI3KQ59H18 835 aa23.44■■□□□ 1.34
RAB3IP-205ENST00000417413 ZNF34Q8IZ26 560 aa23.44■■□□□ 1.34
RAB3IP-205ENST00000417413 FPGT-TNNI3KV9GXZ4 949 aa23.44■■□□□ 1.34
RAB3IP-205ENST00000417413 CSF1RP07333 972 aa23.43■■□□□ 1.34
RAB3IP-205ENST00000417413 BCL11BQ9C0K0 894 aaPredicted RBP23.43■■□□□ 1.34
RAB3IP-205ENST00000417413 SBF2Q86WG5 1849 aa23.42■■□□□ 1.34
RAB3IP-205ENST00000417413 HMGB2P26583 209 aaKnown RBP23.41■■□□□ 1.34
RAB3IP-205ENST00000417413 HSCBQ8IWL3 235 aa23.41■■□□□ 1.34
RAB3IP-205ENST00000417413 SYNE4Q8N205 404 aa23.41■■□□□ 1.34
RAB3IP-205ENST00000417413 IL25Q9H293 177 aa23.41■■□□□ 1.34
RAB3IP-205ENST00000417413 BCORQ6W2J9 1755 aa23.41■■□□□ 1.34
RAB3IP-205ENST00000417413 UBN2Q6ZU65 1347 aa23.41■■□□□ 1.34
RAB3IP-205ENST00000417413 EYA2O00167 538 aa23.41■■□□□ 1.34
RAB3IP-205ENST00000417413 CIAO1O76071 339 aa23.41■■□□□ 1.34
RAB3IP-205ENST00000417413 FAM182BQ5T319 152 aa23.41■■□□□ 1.34
RAB3IP-205ENST00000417413 PTF1AQ7RTS3 328 aa23.41■■□□□ 1.34
RAB3IP-205ENST00000417413 DBNLQ9UJU6 430 aaKnown RBP23.41■■□□□ 1.34
RAB3IP-205ENST00000417413 IL15P40933 162 aaPredicted RBP23.4■■□□□ 1.34
RAB3IP-205ENST00000417413 EVI5LQ96CN4 794 aa23.4■■□□□ 1.34
RAB3IP-205ENST00000417413 ZNF594Q96JF6 807 aaPredicted RBP23.4■■□□□ 1.34
RAB3IP-205ENST00000417413 ANTXR1Q9H6X2 564 aa23.4■■□□□ 1.34
RAB3IP-205ENST00000417413 GPR108Q9NPR9 543 aa23.4■■□□□ 1.34
RAB3IP-205ENST00000417413 EPB41L2O43491 1005 aaKnown RBP23.39■■□□□ 1.33
RAB3IP-205ENST00000417413 CAMTA2O94983 1202 aa23.39■■□□□ 1.33
RAB3IP-205ENST00000417413 RABEP1Q15276 862 aa23.39■■□□□ 1.33
RAB3IP-205ENST00000417413 SGSM2O43147 1006 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 147.6 ms