RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 CLASRPQ8N2M8 674 aaKnown RBP13.11□□□□□ -0.31
SMPD4P1-201ENST00000416717 CCDC191Q8NCU4 936 aa13.11□□□□□ -0.31
SMPD4P1-201ENST00000416717 MAP3K15Q6ZN16 1313 aa13.1□□□□□ -0.31
SMPD4P1-201ENST00000416717 ITPK1Q13572 414 aa13.1□□□□□ -0.31
SMPD4P1-201ENST00000416717 CRKLP46109 303 aaKnown RBP13.1□□□□□ -0.31
SMPD4P1-201ENST00000416717 FOXO4P98177 505 aa13.1□□□□□ -0.31
SMPD4P1-201ENST00000416717 AACSQ86V21 672 aa13.1□□□□□ -0.31
SMPD4P1-201ENST00000416717 DZIP3Q86Y13 1208 aaKnown RBP13.1□□□□□ -0.31
SMPD4P1-201ENST00000416717 ERC1Q8IUD2 1116 aa13.1□□□□□ -0.31
SMPD4P1-201ENST00000416717 FAM89AQ96GI7 184 aa13.1□□□□□ -0.31
SMPD4P1-201ENST00000416717 CCDC85AQ96PX6 553 aaPredicted RBP13.1□□□□□ -0.31
SMPD4P1-201ENST00000416717 ISCA1Q9BUE6 129 aa13.1□□□□□ -0.31
SMPD4P1-201ENST00000416717 STAP2Q9UGK3 403 aa13.1□□□□□ -0.31
SMPD4P1-201ENST00000416717 SYNE4Q8N205 404 aa13.09□□□□□ -0.31
SMPD4P1-201ENST00000416717 CCDC8Q9H0W5 538 aaPredicted RBP13.09□□□□□ -0.31
SMPD4P1-201ENST00000416717 IFIT2P09913 472 aaKnown RBP13.09□□□□□ -0.31
SMPD4P1-201ENST00000416717 PTPN12Q05209 780 aaKnown RBP13.09□□□□□ -0.31
SMPD4P1-201ENST00000416717 RABL6Q3YEC7 729 aaPredicted RBP13.09□□□□□ -0.31
SMPD4P1-201ENST00000416717 INTS5Q6P9B9 1019 aaKnown RBP13.09□□□□□ -0.31
SMPD4P1-201ENST00000416717 CASC1Q6TDU7 716 aa13.09□□□□□ -0.31
SMPD4P1-201ENST00000416717 GIGYF2Q6Y7W6 1299 aaKnown RBP13.09□□□□□ -0.31
SMPD4P1-201ENST00000416717 GJD4Q96KN9 370 aaPredicted RBP13.09□□□□□ -0.31
SMPD4P1-201ENST00000416717 CCDC87Q9NVE4 849 aa13.09□□□□□ -0.31
SMPD4P1-201ENST00000416717 RFX5P48382 616 aaPredicted RBP13.08□□□□□ -0.32
SMPD4P1-201ENST00000416717 PI4K2BQ8TCG2 481 aa13.08□□□□□ -0.32
SMPD4P1-201ENST00000416717 ANKRD36CQ5JPF3 1778 aa13.08□□□□□ -0.32
SMPD4P1-201ENST00000416717 IL6STP40189 918 aaPredicted RBP13.08□□□□□ -0.32
SMPD4P1-201ENST00000416717 EAF2Q96CJ1 260 aaPredicted RBP13.08□□□□□ -0.32
SMPD4P1-201ENST00000416717 ZNF594Q96JF6 807 aaPredicted RBP13.07□□□□□ -0.32
SMPD4P1-201ENST00000416717 TLR7Q9NYK1 1049 aaKnown RBP13.07□□□□□ -0.32
SMPD4P1-201ENST00000416717 FAM177BA6PVY3 158 aa13.06□□□□□ -0.32
SMPD4P1-201ENST00000416717 TFCP2Q12800 502 aa13.06□□□□□ -0.32
SMPD4P1-201ENST00000416717 SMARCC1Q92922 1105 aaPredicted RBP13.06□□□□□ -0.32
SMPD4P1-201ENST00000416717 COPRSQ9NQ92 184 aa13.06□□□□□ -0.32
SMPD4P1-201ENST00000416717 BTAF1O14981 1849 aa13.06□□□□□ -0.32
SMPD4P1-201ENST00000416717 THSD7AQ9UPZ6 1657 aa13.06□□□□□ -0.32
SMPD4P1-201ENST00000416717 SMIM5Q71RC9 77 aa13.06□□□□□ -0.32
SMPD4P1-201ENST00000416717 NLRP10Q86W26 655 aa13.06□□□□□ -0.32
SMPD4P1-201ENST00000416717 COL15A1P39059 1388 aa13.05□□□□□ -0.32
SMPD4P1-201ENST00000416717 RBM25P49756 843 aaKnown RBP13.05□□□□□ -0.32
SMPD4P1-201ENST00000416717 EIF5P55010 431 aaKnown RBP13.05□□□□□ -0.32
SMPD4P1-201ENST00000416717 AOX1Q06278 1338 aa13.05□□□□□ -0.32
SMPD4P1-201ENST00000416717 BECN1Q14457 450 aa13.05□□□□□ -0.32
SMPD4P1-201ENST00000416717 SPRYD3Q8NCJ5 442 aa13.05□□□□□ -0.32
SMPD4P1-201ENST00000416717 ECHDC1Q9NTX5 307 aa13.05□□□□□ -0.32
SMPD4P1-201ENST00000416717 PCCAP05165 728 aaPredicted RBP13.04□□□□□ -0.32
SMPD4P1-201ENST00000416717 CHMLP26374 656 aa13.04□□□□□ -0.32
SMPD4P1-201ENST00000416717 TRIM28Q13263 835 aaKnown RBP13.04□□□□□ -0.32
SMPD4P1-201ENST00000416717 HSP90AB3PQ58FF7 597 aa13.04□□□□□ -0.32
SMPD4P1-201ENST00000416717 ZBTB38Q8NAP3 1195 aaPredicted RBP13.04□□□□□ -0.32
SMPD4P1-201ENST00000416717 LINC00116Q8NCU8 138 aa13.04□□□□□ -0.32
SMPD4P1-201ENST00000416717 GPATCH3Q96I76 525 aa13.04□□□□□ -0.32
SMPD4P1-201ENST00000416717 TBC1D2Q9BYX2 928 aa13.04□□□□□ -0.32
SMPD4P1-201ENST00000416717 TRMT112Q9UI30 125 aaKnown RBP13.04□□□□□ -0.32
SMPD4P1-201ENST00000416717 TRPC5Q9UL62 973 aaPredicted RBP13.04□□□□□ -0.32
SMPD4P1-201ENST00000416717 EP400Q96L91 3159 aa13.04□□□□□ -0.32
SMPD4P1-201ENST00000416717 MYH3P11055 1940 aa13.04□□□□□ -0.32
SMPD4P1-201ENST00000416717 COL5A3P25940 1745 aaPredicted RBP13.04□□□□□ -0.32
SMPD4P1-201ENST00000416717 ERC2O15083 957 aa13.04□□□□□ -0.32
SMPD4P1-201ENST00000416717 SEPT12Q8IYM1 358 aa13.04□□□□□ -0.32
SMPD4P1-201ENST00000416717 QTRT2Q9H974 415 aaKnown RBP13.04□□□□□ -0.32
SMPD4P1-201ENST00000416717 TTC41PQ6P2S7 1318 aa13.03□□□□□ -0.32
SMPD4P1-201ENST00000416717 UBN2Q6ZU65 1347 aa13.03□□□□□ -0.32
SMPD4P1-201ENST00000416717 GLRX3O76003 335 aaKnown RBP13.03□□□□□ -0.32
SMPD4P1-201ENST00000416717 LRRC24Q50LG9 513 aa13.03□□□□□ -0.32
SMPD4P1-201ENST00000416717 USP26Q9BXU7 913 aa13.03□□□□□ -0.32
SMPD4P1-201ENST00000416717 ERVV-1B6SEH8 477 aa13.02□□□□□ -0.32
SMPD4P1-201ENST00000416717 CCDC57Q2TAC2 916 aa13.02□□□□□ -0.32
SMPD4P1-201ENST00000416717 CNTROBQ8N137 903 aa13.02□□□□□ -0.32
SMPD4P1-201ENST00000416717 KIF2CQ99661 725 aa13.02□□□□□ -0.32
SMPD4P1-201ENST00000416717 ESYT1Q9BSJ8 1104 aa13.02□□□□□ -0.32
SMPD4P1-201ENST00000416717 PUS3Q9BZE2 481 aaKnown RBP13.02□□□□□ -0.32
SMPD4P1-201ENST00000416717 BOLA2Q9H3K6 86 aa13.02□□□□□ -0.32
SMPD4P1-201ENST00000416717 SBF2Q86WG5 1849 aa13.02□□□□□ -0.32
SMPD4P1-201ENST00000416717 TNNI3KQ59H18 835 aa13.02□□□□□ -0.33
SMPD4P1-201ENST00000416717 FPGT-TNNI3KV9GXZ4 949 aa13.02□□□□□ -0.33
SMPD4P1-201ENST00000416717 USP42Q9H9J4 1324 aaKnown RBP13.02□□□□□ -0.33
SMPD4P1-201ENST00000416717 IRS4O14654 1257 aaPredicted RBP13.01□□□□□ -0.33
SMPD4P1-201ENST00000416717 REC8O95072 547 aa13.01□□□□□ -0.33
SMPD4P1-201ENST00000416717 NBR1Q14596 966 aa13.01□□□□□ -0.33
SMPD4P1-201ENST00000416717 ATG9AQ7Z3C6 839 aa13.01□□□□□ -0.33
SMPD4P1-201ENST00000416717 IL25Q9H293 177 aa13.01□□□□□ -0.33
SMPD4P1-201ENST00000416717 ATRNO75882 1429 aa13.01□□□□□ -0.33
SMPD4P1-201ENST00000416717 CAMTA2O94983 1202 aa13.01□□□□□ -0.33
SMPD4P1-201ENST00000416717 TAF7LQ5H9L4 462 aa13.01□□□□□ -0.33
SMPD4P1-201ENST00000416717 NEUROD6Q96NK8 337 aa13.01□□□□□ -0.33
SMPD4P1-201ENST00000416717 SLKQ9H2G2 1235 aaPredicted RBP13.01□□□□□ -0.33
SMPD4P1-201ENST00000416717 ANO2Q9NQ90 1003 aa13.01□□□□□ -0.33
SMPD4P1-201ENST00000416717 DBNLQ9UJU6 430 aaKnown RBP13.01□□□□□ -0.33
SMPD4P1-201ENST00000416717 NDUFB9Q9Y6M9 179 aa13.01□□□□□ -0.33
SMPD4P1-201ENST00000416717 NHSQ6T4R5 1651 aa13.01□□□□□ -0.33
SMPD4P1-201ENST00000416717 RREB1Q92766 1687 aa13.01□□□□□ -0.33
SMPD4P1-201ENST00000416717 SUSD4Q5VX71 490 aa13□□□□□ -0.33
SMPD4P1-201ENST00000416717 ZNF34Q8IZ26 560 aa13□□□□□ -0.33
SMPD4P1-201ENST00000416717 DBNDD2Q9BQY9 259 aa13□□□□□ -0.33
SMPD4P1-201ENST00000416717 EYA2O00167 538 aa13□□□□□ -0.33
SMPD4P1-201ENST00000416717 TIMM10P62072 90 aa13□□□□□ -0.33
SMPD4P1-201ENST00000416717 IFIT5Q13325 482 aaKnown RBP13□□□□□ -0.33
SMPD4P1-201ENST00000416717 CWC27Q6UX04 472 aaKnown RBP13□□□□□ -0.33
SMPD4P1-201ENST00000416717 GREM2Q9H772 168 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms