RNA–Protein interactions for RNA: ENST00000415191.6

C2CD3-205, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 2,587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-205ENST00000415191 NEXNQ0ZGT2 675 aa23.31■■□□□ 1.32
C2CD3-205ENST00000415191 CREB3L3Q68CJ9 461 aa23.31■■□□□ 1.32
C2CD3-205ENST00000415191 ZSCAN31Q96LW9 406 aaPredicted RBP23.31■■□□□ 1.32
C2CD3-205ENST00000415191 SLC52A2Q9HAB3 445 aa23.31■■□□□ 1.32
C2CD3-205ENST00000415191 NLRP2Q9NX02 1062 aa23.31■■□□□ 1.32
C2CD3-205ENST00000415191 C5P01031 1676 aa23.31■■□□□ 1.32
C2CD3-205ENST00000415191 NEURL1BA8MQ27 555 aa23.31■■□□□ 1.32
C2CD3-205ENST00000415191 FIBPO43427 364 aa23.31■■□□□ 1.32
C2CD3-205ENST00000415191 SH2B1Q9NRF2 756 aaPredicted RBP23.31■■□□□ 1.32
C2CD3-205ENST00000415191 ATP6V1DQ9Y5K8 247 aa23.31■■□□□ 1.32
C2CD3-205ENST00000415191 OFD1O75665 1012 aa23.3■■□□□ 1.32
C2CD3-205ENST00000415191 XAGE3Q8WTP9 111 aa23.3■■□□□ 1.32
C2CD3-205ENST00000415191 NPHP3Q7Z494 1330 aa23.3■■□□□ 1.32
C2CD3-205ENST00000415191 NFATC2IPQ8NCF5 419 aa23.3■■□□□ 1.32
C2CD3-205ENST00000415191 MAP4K1Q92918 833 aa23.3■■□□□ 1.32
C2CD3-205ENST00000415191 FSD1Q9BTV5 496 aa23.3■■□□□ 1.32
C2CD3-205ENST00000415191 LMTK3Q96Q04 1460 aa23.3■■□□□ 1.32
C2CD3-205ENST00000415191 KDM6AO15550 1401 aaPredicted RBP23.29■■□□□ 1.32
C2CD3-205ENST00000415191 UBE2HP62256 183 aa23.29■■□□□ 1.32
C2CD3-205ENST00000415191 CCDC183Q5T5S1 534 aa23.29■■□□□ 1.32
C2CD3-205ENST00000415191 COPS6Q7L5N1 327 aa23.29■■□□□ 1.32
C2CD3-205ENST00000415191 PROSER2Q86WR7 435 aaPredicted RBP23.29■■□□□ 1.32
C2CD3-205ENST00000415191 SCN11AQ9UI33 1791 aa23.29■■□□□ 1.32
C2CD3-205ENST00000415191 GCKRQ14397 625 aa23.29■■□□□ 1.32
C2CD3-205ENST00000415191 ME3Q16798 604 aa23.29■■□□□ 1.32
C2CD3-205ENST00000415191 MYD88Q99836 296 aa23.29■■□□□ 1.32
C2CD3-205ENST00000415191 CCDC39Q9UFE4 941 aa23.29■■□□□ 1.32
C2CD3-205ENST00000415191 ZKSCAN5Q9Y2L8 839 aa23.29■■□□□ 1.32
C2CD3-205ENST00000415191 A0A0D9SFI3 127 aa23.28■■□□□ 1.32
C2CD3-205ENST00000415191 ST3GAL1Q11201 340 aa23.28■■□□□ 1.32
C2CD3-205ENST00000415191 EPHA10Q5JZY3 1008 aa23.28■■□□□ 1.32
C2CD3-205ENST00000415191 NECAB1Q8N987 351 aa23.28■■□□□ 1.32
C2CD3-205ENST00000415191 MTMR6Q9Y217 621 aa23.28■■□□□ 1.32
C2CD3-205ENST00000415191 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.27■■□□□ 1.32
C2CD3-205ENST00000415191 C1orf167Q5SNV9 1468 aa23.27■■□□□ 1.32
C2CD3-205ENST00000415191 SLC27A2O14975 620 aa23.27■■□□□ 1.32
C2CD3-205ENST00000415191 ZNF500O60304 480 aaPredicted RBP23.27■■□□□ 1.32
C2CD3-205ENST00000415191 PHKG2P15735 406 aa23.27■■□□□ 1.32
C2CD3-205ENST00000415191 ZNF496Q96IT1 587 aaPredicted RBP23.27■■□□□ 1.32
C2CD3-205ENST00000415191 METTL22Q9BUU2 404 aaPredicted RBP23.27■■□□□ 1.32
C2CD3-205ENST00000415191 TATP17735 454 aaPredicted RBP23.26■■□□□ 1.31
C2CD3-205ENST00000415191 TPCN1Q9ULQ1 816 aa23.26■■□□□ 1.31
C2CD3-205ENST00000415191 DNM1Q05193 864 aaKnown RBP23.26■■□□□ 1.31
C2CD3-205ENST00000415191 VPS37CA5D8V6 355 aaPredicted RBP23.25■■□□□ 1.31
C2CD3-205ENST00000415191 COL9A3Q14050 684 aaPredicted RBP23.25■■□□□ 1.31
C2CD3-205ENST00000415191 JARID2Q92833 1246 aaPredicted RBP23.25■■□□□ 1.31
C2CD3-205ENST00000415191 SNRKQ9NRH2 765 aa23.25■■□□□ 1.31
C2CD3-205ENST00000415191 KIF1AQ12756 1690 aa23.25■■□□□ 1.31
C2CD3-205ENST00000415191 PIP4K2AP48426 406 aaPredicted RBP23.25■■□□□ 1.31
C2CD3-205ENST00000415191 PSMA5P28066 241 aa23.24■■□□□ 1.31
C2CD3-205ENST00000415191 FAM184AQ8NB25 1140 aa23.24■■□□□ 1.31
C2CD3-205ENST00000415191 TPM2P07951 284 aa23.24■■□□□ 1.31
C2CD3-205ENST00000415191 ANKRD13DQ6ZTN6 518 aa23.24■■□□□ 1.31
C2CD3-205ENST00000415191 PTMAP06454 111 aaKnown RBP23.23■■□□□ 1.31
C2CD3-205ENST00000415191 MCM5P33992 734 aa23.23■■□□□ 1.31
C2CD3-205ENST00000415191 RNF20Q5VTR2 975 aa23.23■■□□□ 1.31
C2CD3-205ENST00000415191 MEGF6O75095 1541 aa23.23■■□□□ 1.31
C2CD3-205ENST00000415191 MED23Q9ULK4 1368 aa23.23■■□□□ 1.31
C2CD3-205ENST00000415191 EDC3Q96F86 508 aaKnown RBP23.23■■□□□ 1.31
C2CD3-205ENST00000415191 TCEANC2Q96MN5 208 aa23.23■■□□□ 1.31
C2CD3-205ENST00000415191 USP16Q9Y5T5 823 aa23.23■■□□□ 1.31
C2CD3-205ENST00000415191 LETM1O95202 739 aaPredicted RBP23.22■■□□□ 1.31
C2CD3-205ENST00000415191 CSPP1Q1MSJ5 1256 aa23.22■■□□□ 1.31
C2CD3-205ENST00000415191 BLOC1S2Q6QNY1 142 aa23.22■■□□□ 1.31
C2CD3-205ENST00000415191 ZNF589Q86UQ0 364 aaPredicted RBP23.22■■□□□ 1.31
C2CD3-205ENST00000415191 ALS2Q96Q42 1657 aa23.22■■□□□ 1.31
C2CD3-205ENST00000415191 IFNL2Q8IZJ0 200 aa23.22■■□□□ 1.31
C2CD3-205ENST00000415191 TTC5Q8N0Z6 440 aa23.22■■□□□ 1.31
C2CD3-205ENST00000415191 C19orf44Q9H6X5 657 aa23.22■■□□□ 1.31
C2CD3-205ENST00000415191 TAF6LQ9Y6J9 622 aa23.22■■□□□ 1.31
C2CD3-205ENST00000415191 CSB-PGBD3P0DP91 1061 aa23.21■■□□□ 1.31
C2CD3-205ENST00000415191 MRC1P22897 1456 aa23.21■■□□□ 1.31
C2CD3-205ENST00000415191 SNRPA1P09661 255 aaKnown RBP23.21■■□□□ 1.31
C2CD3-205ENST00000415191 DDX17Q92841 729 aaKnown RBP23.21■■□□□ 1.31
C2CD3-205ENST00000415191 HCLS1P14317 486 aaPredicted RBP23.2■■□□□ 1.3
C2CD3-205ENST00000415191 UVSSAQ2YD98 709 aa23.2■■□□□ 1.3
C2CD3-205ENST00000415191 LARP1BQ659C4 914 aaKnown RBP23.2■■□□□ 1.3
C2CD3-205ENST00000415191 LRP10Q7Z4F1 713 aa23.2■■□□□ 1.3
C2CD3-205ENST00000415191 COPRSQ9NQ92 184 aa23.2■■□□□ 1.3
C2CD3-205ENST00000415191 ADAMTSL3P82987 1691 aa23.2■■□□□ 1.3
C2CD3-205ENST00000415191 UBE3BQ7Z3V4 1068 aa23.2■■□□□ 1.3
C2CD3-205ENST00000415191 DBNLQ9UJU6 430 aaKnown RBP23.2■■□□□ 1.3
C2CD3-205ENST00000415191 MST1RQ04912 1400 aa23.2■■□□□ 1.3
C2CD3-205ENST00000415191 USP25Q9UHP3 1055 aa23.19■■□□□ 1.3
C2CD3-205ENST00000415191 AFDNP55196 1824 aaKnown RBP23.19■■□□□ 1.3
C2CD3-205ENST00000415191 RPS6KB1P23443 525 aa23.19■■□□□ 1.3
C2CD3-205ENST00000415191 TFCP2Q12800 502 aa23.19■■□□□ 1.3
C2CD3-205ENST00000415191 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.19■■□□□ 1.3
C2CD3-205ENST00000415191 RFX5P48382 616 aaPredicted RBP23.18■■□□□ 1.3
C2CD3-205ENST00000415191 PTPN12Q05209 780 aaKnown RBP23.18■■□□□ 1.3
C2CD3-205ENST00000415191 ANKRD1Q15327 319 aa23.18■■□□□ 1.3
C2CD3-205ENST00000415191 TNNI3KQ59H18 835 aa23.18■■□□□ 1.3
C2CD3-205ENST00000415191 FPGT-TNNI3KV9GXZ4 949 aa23.18■■□□□ 1.3
C2CD3-205ENST00000415191 GIMAP6Q6P9H5 292 aa23.17■■□□□ 1.3
C2CD3-205ENST00000415191 R3HCC1Q9Y3T6 440 aaKnown RBP23.17■■□□□ 1.3
C2CD3-205ENST00000415191 ATP5J2-PTCD1G3V325 749 aa23.17■■□□□ 1.3
C2CD3-205ENST00000415191 CYP27B1O15528 508 aa23.17■■□□□ 1.3
C2CD3-205ENST00000415191 PTCD1O75127 700 aaKnown RBP23.17■■□□□ 1.3
C2CD3-205ENST00000415191 TAF5LO75529 589 aa23.17■■□□□ 1.3
C2CD3-205ENST00000415191 ATP5JP18859 108 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms