RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 PPP1R15AO75807 674 aaPredicted RBP10.71□□□□□ -0.69
ATG4C-204ENST00000414558 GSK3AP49840 483 aa10.71□□□□□ -0.69
ATG4C-204ENST00000414558 GRIN2CQ14957 1233 aa10.71□□□□□ -0.69
ATG4C-204ENST00000414558 CNTNAP5Q8WYK1 1306 aa10.71□□□□□ -0.69
ATG4C-204ENST00000414558 SLC30A3Q99726 388 aa10.71□□□□□ -0.69
ATG4C-204ENST00000414558 KLK14Q9P0G3 267 aa10.71□□□□□ -0.69
ATG4C-204ENST00000414558 SIN3BO75182 1162 aa10.7□□□□□ -0.7
ATG4C-204ENST00000414558 C11orf91Q3C1V1 193 aa10.7□□□□□ -0.7
ATG4C-204ENST00000414558 TMEM151AQ8N4L1 468 aa10.7□□□□□ -0.7
ATG4C-204ENST00000414558 CLP1Q92989 425 aaKnown RBP10.7□□□□□ -0.7
ATG4C-204ENST00000414558 BTBD6Q96KE9 485 aa10.7□□□□□ -0.7
ATG4C-204ENST00000414558 CXXC1Q9P0U4 656 aaPredicted RBP10.7□□□□□ -0.7
ATG4C-204ENST00000414558 MKL2Q9ULH7 1088 aa10.7□□□□□ -0.7
ATG4C-204ENST00000414558 BCS1LQ9Y276 419 aa10.7□□□□□ -0.7
ATG4C-204ENST00000414558 GDF11O95390 407 aa10.69□□□□□ -0.7
ATG4C-204ENST00000414558 EPB42P16452 691 aa10.69□□□□□ -0.7
ATG4C-204ENST00000414558 COL26A1Q96A83 441 aa10.69□□□□□ -0.7
ATG4C-204ENST00000414558 DMGDHQ9UI17 866 aaKnown RBP10.69□□□□□ -0.7
ATG4C-204ENST00000414558 ELOA3CA0A087WX78 387 aaPredicted RBP10.68□□□□□ -0.7
ATG4C-204ENST00000414558 ELOA3DA6NLF2 546 aaPredicted RBP10.68□□□□□ -0.7
ATG4C-204ENST00000414558 SNRPNP63162 240 aaKnown RBP10.68□□□□□ -0.7
ATG4C-204ENST00000414558 ELOA3BQ3SY89 546 aa10.68□□□□□ -0.7
ATG4C-204ENST00000414558 ELOA3Q8NG57 546 aa10.68□□□□□ -0.7
ATG4C-204ENST00000414558 EFCC1Q9HA90 598 aa10.68□□□□□ -0.7
ATG4C-204ENST00000414558 PIK3R2O00459 728 aa10.67□□□□□ -0.7
ATG4C-204ENST00000414558 ALAS2P22557 587 aa10.67□□□□□ -0.7
ATG4C-204ENST00000414558 IDH3AP50213 366 aa10.67□□□□□ -0.7
ATG4C-204ENST00000414558 CHSY3Q70JA7 882 aa10.67□□□□□ -0.7
ATG4C-204ENST00000414558 ADARB2-AS1A8MUL3 147 aa10.66□□□□□ -0.7
ATG4C-204ENST00000414558 PTCD1O75127 700 aaKnown RBP10.66□□□□□ -0.7
ATG4C-204ENST00000414558 RAB44Q7Z6P3 723 aaPredicted RBP10.66□□□□□ -0.7
ATG4C-204ENST00000414558 TNFRSF25Q93038 417 aa10.66□□□□□ -0.7
ATG4C-204ENST00000414558 LRFN2Q9ULH4 789 aa10.66□□□□□ -0.7
ATG4C-204ENST00000414558 INPP5BP32019 993 aa10.65□□□□□ -0.7
ATG4C-204ENST00000414558 ARSDP51689 593 aa10.65□□□□□ -0.7
ATG4C-204ENST00000414558 COX20Q5RI15 118 aa10.65□□□□□ -0.7
ATG4C-204ENST00000414558 IFT43Q96FT9 208 aa10.65□□□□□ -0.7
ATG4C-204ENST00000414558 MICAL2O94851 1124 aa10.64□□□□□ -0.71
ATG4C-204ENST00000414558 DGKGP49619 791 aa10.64□□□□□ -0.71
ATG4C-204ENST00000414558 C16orf46Q6P387 395 aa10.64□□□□□ -0.71
ATG4C-204ENST00000414558 BHMTQ93088 406 aa10.64□□□□□ -0.71
ATG4C-204ENST00000414558 MDFIQ99750 246 aa10.64□□□□□ -0.71
ATG4C-204ENST00000414558 MKNK1Q9BUB5 465 aa10.64□□□□□ -0.71
ATG4C-204ENST00000414558 HOXB4P17483 251 aaPredicted RBP10.63□□□□□ -0.71
ATG4C-204ENST00000414558 ATP2B4P23634 1241 aa10.63□□□□□ -0.71
ATG4C-204ENST00000414558 CCINQ13939 588 aa10.63□□□□□ -0.71
ATG4C-204ENST00000414558 PNMA5Q96PV4 448 aa10.63□□□□□ -0.71
ATG4C-204ENST00000414558 C11orf16Q9NQ32 467 aa10.63□□□□□ -0.71
ATG4C-204ENST00000414558 GNB5O14775 395 aa10.62□□□□□ -0.71
ATG4C-204ENST00000414558 LINC00114Q6XXX2 140 aa10.62□□□□□ -0.71
ATG4C-204ENST00000414558 GSX2Q9BZM3 304 aa10.62□□□□□ -0.71
ATG4C-204ENST00000414558 ADH7P40394 386 aa10.61□□□□□ -0.71
ATG4C-204ENST00000414558 TREML1Q86YW5 311 aa10.61□□□□□ -0.71
ATG4C-204ENST00000414558 BRD2P25440 801 aaKnown RBP10.6□□□□□ -0.71
ATG4C-204ENST00000414558 SAP130Q9H0E3 1048 aa10.6□□□□□ -0.71
ATG4C-204ENST00000414558 SLAIN2Q9P270 581 aa10.6□□□□□ -0.71
ATG4C-204ENST00000414558 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.6□□□□□ -0.71
ATG4C-204ENST00000414558 GRNP28799 593 aaKnown RBP10.59□□□□□ -0.71
ATG4C-204ENST00000414558 ALYREFQ86V81 257 aaKnown RBP10.59□□□□□ -0.71
ATG4C-204ENST00000414558 NOP53Q9NZM5 478 aaKnown RBP10.59□□□□□ -0.71
ATG4C-204ENST00000414558 NFKB1P19838 968 aa10.58□□□□□ -0.72
ATG4C-204ENST00000414558 NAA30Q147X3 362 aaPredicted RBP10.58□□□□□ -0.72
ATG4C-204ENST00000414558 CAPN12Q6ZSI9 719 aa10.58□□□□□ -0.72
ATG4C-204ENST00000414558 KCTD17Q8N5Z5 321 aa10.58□□□□□ -0.72
ATG4C-204ENST00000414558 DCAF5Q96JK2 942 aa10.58□□□□□ -0.72
ATG4C-204ENST00000414558 UBE2OQ9C0C9 1292 aaKnown RBP10.58□□□□□ -0.72
ATG4C-204ENST00000414558 OPLAHO14841 1288 aa10.57□□□□□ -0.72
ATG4C-204ENST00000414558 ETFBKMTQ8IXQ9 262 aa10.57□□□□□ -0.72
ATG4C-204ENST00000414558 RTCBQ9Y3I0 505 aaKnown RBP10.57□□□□□ -0.72
ATG4C-204ENST00000414558 TMEM88BA6NKF7 163 aa10.56□□□□□ -0.72
ATG4C-204ENST00000414558 TBC1D8BQ0IIM8 1120 aa10.56□□□□□ -0.72
ATG4C-204ENST00000414558 IGFLR1Q9H665 355 aa10.56□□□□□ -0.72
ATG4C-204ENST00000414558 TNFRSF10BO14763 440 aa10.55□□□□□ -0.72
ATG4C-204ENST00000414558 MAP3K6O95382 1288 aa10.55□□□□□ -0.72
ATG4C-204ENST00000414558 RGL4Q8IZJ4 473 aa10.55□□□□□ -0.72
ATG4C-204ENST00000414558 FAM13BQ9NYF5 915 aa10.55□□□□□ -0.72
ATG4C-204ENST00000414558 M0R082 166 aa10.54□□□□□ -0.72
ATG4C-204ENST00000414558 EGFRP00533 1210 aa10.54□□□□□ -0.72
ATG4C-204ENST00000414558 PCSK7Q16549 785 aa10.54□□□□□ -0.72
ATG4C-204ENST00000414558 ZNF417Q8TAU3 575 aa10.54□□□□□ -0.72
ATG4C-204ENST00000414558 ZNF587Q96SQ5 575 aaPredicted RBP10.54□□□□□ -0.72
ATG4C-204ENST00000414558 SUV39H2Q9H5I1 410 aa10.54□□□□□ -0.72
ATG4C-204ENST00000414558 STIM2Q9P246 746 aa10.54□□□□□ -0.72
ATG4C-204ENST00000414558 SLC6A14Q9UN76 642 aa10.54□□□□□ -0.72
ATG4C-204ENST00000414558 STARD13Q9Y3M8 1113 aa10.54□□□□□ -0.72
ATG4C-204ENST00000414558 COL8A1P27658 744 aa10.53□□□□□ -0.72
ATG4C-204ENST00000414558 KRT25Q7Z3Z0 450 aa10.53□□□□□ -0.72
ATG4C-204ENST00000414558 CMTR1Q8N1G2 835 aaKnown RBP10.53□□□□□ -0.72
ATG4C-204ENST00000414558 ABTB2Q8N961 1025 aa10.53□□□□□ -0.72
ATG4C-204ENST00000414558 PRDM6Q9NQX0 595 aa10.53□□□□□ -0.72
ATG4C-204ENST00000414558 DNAJB12Q9NXW2 375 aaKnown RBP10.53□□□□□ -0.72
ATG4C-204ENST00000414558 USP20Q9Y2K6 914 aa10.53□□□□□ -0.72
ATG4C-204ENST00000414558 SUPT5HO00267 1087 aaKnown RBP10.52□□□□□ -0.73
ATG4C-204ENST00000414558 XYLBO75191 536 aa10.52□□□□□ -0.73
ATG4C-204ENST00000414558 ALBP02768 609 aa10.52□□□□□ -0.73
ATG4C-204ENST00000414558 RARAP10276 462 aa10.52□□□□□ -0.73
ATG4C-204ENST00000414558 MICALL1Q8N3F8 863 aa10.52□□□□□ -0.73
ATG4C-204ENST00000414558 SEPT3Q9UH03 358 aa10.52□□□□□ -0.73
ATG4C-204ENST00000414558 TIMELESSQ9UNS1 1208 aa10.52□□□□□ -0.73
ATG4C-204ENST00000414558 SPDYE3A6NKU9 549 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms