RNA–Protein interactions for RNA: ENST00000413170.1

PCCA-204, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 3

Gene PCCA, Length 397 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-204ENST00000413170 TPTE2Q6XPS3 522 aa17.27■□□□□ 0.36
PCCA-204ENST00000413170 LARGE2Q8N3Y3 721 aa17.27■□□□□ 0.36
PCCA-204ENST00000413170 FMNL2Q96PY5 1086 aa17.27■□□□□ 0.36
PCCA-204ENST00000413170 NIP7Q9Y221 180 aaKnown RBP eCLIP17.27■□□□□ 0.36
PCCA-204ENST00000413170 ZNF652Q9Y2D9 606 aa17.27■□□□□ 0.36
PCCA-204ENST00000413170 ZIC5Q96T25 663 aa17.26■□□□□ 0.35
PCCA-204ENST00000413170 GLIS2Q9BZE0 524 aaPredicted RBP17.26■□□□□ 0.35
PCCA-204ENST00000413170 CLEC4GQ6UXB4 293 aa17.25■□□□□ 0.35
PCCA-204ENST00000413170 SLC51AQ86UW1 340 aa17.25■□□□□ 0.35
PCCA-204ENST00000413170 IL17REQ8NFR9 667 aa17.24■□□□□ 0.35
PCCA-204ENST00000413170 HHIPL1Q96JK4 782 aa17.24■□□□□ 0.35
PCCA-204ENST00000413170 ADARB2Q9NS39 739 aaKnown RBP17.24■□□□□ 0.35
PCCA-204ENST00000413170 KCNQ3O43525 872 aa17.23■□□□□ 0.35
PCCA-204ENST00000413170 GTF2E1P29083 439 aaPredicted RBP17.23■□□□□ 0.35
PCCA-204ENST00000413170 NIM1KQ8IY84 436 aa17.23■□□□□ 0.35
PCCA-204ENST00000413170 USP16Q9Y5T5 823 aa17.23■□□□□ 0.35
PCCA-204ENST00000413170 PRAMEF22A3QJZ6 481 aa17.22■□□□□ 0.35
PCCA-204ENST00000413170 C1QBPQ07021 282 aaKnown RBP17.22■□□□□ 0.35
PCCA-204ENST00000413170 NOGQ13253 232 aa17.22■□□□□ 0.35
PCCA-204ENST00000413170 GPRC5DQ9NZD1 345 aa17.22■□□□□ 0.35
PCCA-204ENST00000413170 ABCC12Q96J65 1359 aa17.22■□□□□ 0.35
PCCA-204ENST00000413170 SIPA1L3O60292 1781 aaPredicted RBP17.21■□□□□ 0.35
PCCA-204ENST00000413170 TCERG1O14776 1098 aaKnown RBP17.21■□□□□ 0.35
PCCA-204ENST00000413170 GNAT3A8MTJ3 354 aa17.2■□□□□ 0.34
PCCA-204ENST00000413170 CC2D2BQ6DHV5 1058 aa17.2■□□□□ 0.34
PCCA-204ENST00000413170 BTBD11A6QL63 1104 aa17.19■□□□□ 0.34
PCCA-204ENST00000413170 PPIP5K2O43314 1243 aa17.19■□□□□ 0.34
PCCA-204ENST00000413170 HUNKP57058 714 aa17.19■□□□□ 0.34
PCCA-204ENST00000413170 AOC3Q16853 763 aa17.19■□□□□ 0.34
PCCA-204ENST00000413170 CRY2Q49AN0 593 aa17.19■□□□□ 0.34
PCCA-204ENST00000413170 NUTM1Q86Y26 1132 aa17.19■□□□□ 0.34
PCCA-204ENST00000413170 RPGRQ92834 1020 aaKnown RBP17.19■□□□□ 0.34
PCCA-204ENST00000413170 GMPSP49915 693 aaPredicted RBP17.18■□□□□ 0.34
PCCA-204ENST00000413170 HLFQ16534 295 aa17.18■□□□□ 0.34
PCCA-204ENST00000413170 KNSTRNQ9Y448 316 aa17.18■□□□□ 0.34
PCCA-204ENST00000413170 NPC1L1Q9UHC9 1359 aa17.17■□□□□ 0.34
PCCA-204ENST00000413170 PPEF1O14829 653 aaPredicted RBP17.17■□□□□ 0.34
PCCA-204ENST00000413170 DIAPH1O60610 1272 aaKnown RBP17.17■□□□□ 0.34
PCCA-204ENST00000413170 CXCL9Q07325 125 aa17.16■□□□□ 0.34
PCCA-204ENST00000413170 DLK2Q6UY11 383 aa17.16■□□□□ 0.34
PCCA-204ENST00000413170 GAS2L2Q8NHY3 880 aa17.16■□□□□ 0.34
PCCA-204ENST00000413170 TRPM4Q8TD43 1214 aa17.16■□□□□ 0.34
PCCA-204ENST00000413170 NBPF26B4DH59 902 aa17.15■□□□□ 0.34
PCCA-204ENST00000413170 TRPA1O75762 1119 aa17.15■□□□□ 0.34
PCCA-204ENST00000413170 HIRAP54198 1017 aaPredicted RBP17.15■□□□□ 0.34
PCCA-204ENST00000413170 NBPF10Q6P3W6 841 aaKnown RBP17.15■□□□□ 0.34
PCCA-204ENST00000413170 CDC37L1Q7L3B6 337 aa17.15■□□□□ 0.34
PCCA-204ENST00000413170 NBPF15Q8N660 670 aa17.15■□□□□ 0.34
PCCA-204ENST00000413170 SAGE1Q9NXZ1 904 aa17.15■□□□□ 0.34
PCCA-204ENST00000413170 PGAP2Q9UHJ9 254 aa17.15■□□□□ 0.34
PCCA-204ENST00000413170 CEMIPQ8WUJ3 1361 aa17.15■□□□□ 0.34
PCCA-204ENST00000413170 GRIPAP1Q4V328 841 aa17.14■□□□□ 0.33
PCCA-204ENST00000413170 USP48Q86UV5 1035 aa17.14■□□□□ 0.33
PCCA-204ENST00000413170 BCL2L13Q9BXK5 485 aa17.14■□□□□ 0.33
PCCA-204ENST00000413170 NYXQ9GZU5 481 aa17.14■□□□□ 0.33
PCCA-204ENST00000413170 FAM155AB1AL88 458 aaPredicted RBP17.13■□□□□ 0.33
PCCA-204ENST00000413170 U2SURPO15042 1029 aaKnown RBP17.13■□□□□ 0.33
PCCA-204ENST00000413170 SNRPA1P09661 255 aaKnown RBP17.13■□□□□ 0.33
PCCA-204ENST00000413170 HOXA10P31260 410 aaPredicted RBP17.13■□□□□ 0.33
PCCA-204ENST00000413170 KIF23Q02241 960 aaPredicted RBP17.13■□□□□ 0.33
PCCA-204ENST00000413170 RGMBQ6NW40 437 aa17.13■□□□□ 0.33
PCCA-204ENST00000413170 CTU1Q7Z7A3 348 aaKnown RBP17.13■□□□□ 0.33
PCCA-204ENST00000413170 RBM17Q96I25 401 aaKnown RBP17.13■□□□□ 0.33
PCCA-204ENST00000413170 RNF186Q9NXI6 227 aa17.13■□□□□ 0.33
PCCA-204ENST00000413170 ZNRF3Q9ULT6 936 aa17.13■□□□□ 0.33
PCCA-204ENST00000413170 RIC1Q4ADV7 1423 aa17.13■□□□□ 0.33
PCCA-204ENST00000413170 SHTN1A0MZ66 631 aa17.12■□□□□ 0.33
PCCA-204ENST00000413170 RGL2O15211 777 aa17.12■□□□□ 0.33
PCCA-204ENST00000413170 ZC3H15Q8WU90 426 aaKnown RBP17.12■□□□□ 0.33
PCCA-204ENST00000413170 RAD17O75943 681 aa17.11■□□□□ 0.33
PCCA-204ENST00000413170 AMER1Q5JTC6 1135 aaPredicted RBP17.11■□□□□ 0.33
PCCA-204ENST00000413170 HPS5Q9UPZ3 1129 aa17.11■□□□□ 0.33
PCCA-204ENST00000413170 KIF7Q2M1P5 1343 aa17.11■□□□□ 0.33
PCCA-204ENST00000413170 GPTP24298 496 aa17.1■□□□□ 0.33
PCCA-204ENST00000413170 ZNF157P51786 506 aaPredicted RBP17.1■□□□□ 0.33
PCCA-204ENST00000413170 C3orf67Q6ZVT6 689 aa17.1■□□□□ 0.33
PCCA-204ENST00000413170 NGEFQ8N5V2 710 aa17.1■□□□□ 0.33
PCCA-204ENST00000413170 CRAMP1Q96RY5 1269 aa17.1■□□□□ 0.33
PCCA-204ENST00000413170 TMX4Q9H1E5 349 aaPredicted RBP17.1■□□□□ 0.33
PCCA-204ENST00000413170 CDHR2Q9BYE9 1310 aa17.1■□□□□ 0.33
PCCA-204ENST00000413170 HSPA5P11021 654 aaKnown RBP17.09■□□□□ 0.33
PCCA-204ENST00000413170 GBA2Q9HCG7 927 aaPredicted RBP17.09■□□□□ 0.33
PCCA-204ENST00000413170 UBN2Q6ZU65 1347 aa17.08■□□□□ 0.32
PCCA-204ENST00000413170 MICALL2Q8IY33 904 aa17.08■□□□□ 0.32
PCCA-204ENST00000413170 CCDC102AQ96A19 550 aa17.08■□□□□ 0.32
PCCA-204ENST00000413170 GCC1Q96CN9 775 aa17.08■□□□□ 0.32
PCCA-204ENST00000413170 CNOT7Q9UIV1 285 aaKnown RBP17.08■□□□□ 0.32
PCCA-204ENST00000413170 TNIP1Q15025 636 aa17.07■□□□□ 0.32
PCCA-204ENST00000413170 KRT26Q7Z3Y9 468 aa17.07■□□□□ 0.32
PCCA-204ENST00000413170 C2orf69Q8N8R5 385 aa17.07■□□□□ 0.32
PCCA-204ENST00000413170 SUPT20HQ8NEM7 779 aa17.07■□□□□ 0.32
PCCA-204ENST00000413170 VPS33BQ9H267 617 aa17.07■□□□□ 0.32
PCCA-204ENST00000413170 ATP6V0A2Q9Y487 856 aa17.07■□□□□ 0.32
PCCA-204ENST00000413170 COL3A1P02461 1466 aaPredicted RBP17.06■□□□□ 0.32
PCCA-204ENST00000413170 ADM5C9JUS6 153 aa17.06■□□□□ 0.32
PCCA-204ENST00000413170 H7C1D1 291 aa17.06■□□□□ 0.32
PCCA-204ENST00000413170 EIF4G2P78344 907 aaKnown RBP eCLIP17.06■□□□□ 0.32
PCCA-204ENST00000413170 HABP4Q5JVS0 413 aaKnown RBP17.06■□□□□ 0.32
PCCA-204ENST00000413170 SUSD4Q5VX71 490 aa17.06■□□□□ 0.32
PCCA-204ENST00000413170 DPP8Q6V1X1 898 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms