RNA–Protein interactions for RNA: ENST00000412710.1

CUBNP1-201, Transcript of cubilin pseudogene 1, humanhuman

BASIC

Gene CUBNP1, Length 1,790 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP1-201ENST00000412710 NBPF4Q96M43 638 aa10.75□□□□□ -0.69
CUBNP1-201ENST00000412710 JAKMIP1Q96N16 626 aaKnown RBP10.75□□□□□ -0.69
CUBNP1-201ENST00000412710 LGR6Q9HBX8 967 aa10.75□□□□□ -0.69
CUBNP1-201ENST00000412710 GDPD2Q9HCC8 539 aa10.75□□□□□ -0.69
CUBNP1-201ENST00000412710 DDX58O95786 925 aaKnown RBP10.74□□□□□ -0.69
CUBNP1-201ENST00000412710 CAVIN2O95810 425 aa10.74□□□□□ -0.69
CUBNP1-201ENST00000412710 CCDC192P0DO97 292 aa10.74□□□□□ -0.69
CUBNP1-201ENST00000412710 KRT85P78386 507 aa10.74□□□□□ -0.69
CUBNP1-201ENST00000412710 OS9Q13438 667 aaPredicted RBP10.74□□□□□ -0.69
CUBNP1-201ENST00000412710 USPL1Q5W0Q7 1092 aa10.74□□□□□ -0.69
CUBNP1-201ENST00000412710 CREB3L3Q68CJ9 461 aa10.74□□□□□ -0.69
CUBNP1-201ENST00000412710 SCAND2PQ9GZW5 306 aaPredicted RBP10.74□□□□□ -0.69
CUBNP1-201ENST00000412710 SPG7Q9UQ90 795 aa10.74□□□□□ -0.69
CUBNP1-201ENST00000412710 NPHP4O75161 1426 aaPredicted RBP10.73□□□□□ -0.69
CUBNP1-201ENST00000412710 GOLGA6L6A8MZA4 724 aa10.73□□□□□ -0.69
CUBNP1-201ENST00000412710 GRM8O00222 908 aa10.73□□□□□ -0.69
CUBNP1-201ENST00000412710 LARGE1O95461 756 aa10.73□□□□□ -0.69
CUBNP1-201ENST00000412710 HCLS1P14317 486 aaPredicted RBP10.73□□□□□ -0.69
CUBNP1-201ENST00000412710 EIF2S2P20042 333 aaKnown RBP10.73□□□□□ -0.69
CUBNP1-201ENST00000412710 ST3GAL1Q11201 340 aa10.73□□□□□ -0.69
CUBNP1-201ENST00000412710 KRT32Q14532 448 aa10.73□□□□□ -0.69
CUBNP1-201ENST00000412710 PRPF40BQ6NWY9 871 aaKnown RBP10.73□□□□□ -0.69
CUBNP1-201ENST00000412710 ZNF530Q6P9A1 599 aaPredicted RBP10.73□□□□□ -0.69
CUBNP1-201ENST00000412710 VSIG10Q8N0Z9 540 aa10.73□□□□□ -0.69
CUBNP1-201ENST00000412710 DDX21Q9NR30 783 aaKnown RBP eCLIP10.73□□□□□ -0.69
CUBNP1-201ENST00000412710 C9orf78Q9NZ63 289 aaPredicted RBP10.73□□□□□ -0.69
CUBNP1-201ENST00000412710 RBM8AQ9Y5S9 174 aaKnown RBP10.73□□□□□ -0.69
CUBNP1-201ENST00000412710 MAP4K4O95819 1239 aaPredicted RBP10.72□□□□□ -0.69
CUBNP1-201ENST00000412710 ME3Q16798 604 aa10.72□□□□□ -0.69
CUBNP1-201ENST00000412710 ADCK5Q3MIX3 580 aa10.72□□□□□ -0.69
CUBNP1-201ENST00000412710 CCDC83Q8IWF9 413 aa10.72□□□□□ -0.69
CUBNP1-201ENST00000412710 FAM200AQ8TCP9 573 aa10.72□□□□□ -0.69
CUBNP1-201ENST00000412710 DDX19AQ9NUU7 478 aaKnown RBP10.72□□□□□ -0.69
CUBNP1-201ENST00000412710 MAP3K2Q9Y2U5 619 aa10.72□□□□□ -0.69
CUBNP1-201ENST00000412710 ZNF142P52746 1687 aaPredicted RBP10.72□□□□□ -0.69
CUBNP1-201ENST00000412710 RGPD2P0DJD1 1756 aa10.72□□□□□ -0.69
CUBNP1-201ENST00000412710 NPHP3Q7Z494 1330 aa10.72□□□□□ -0.69
CUBNP1-201ENST00000412710 SLC27A2O14975 620 aa10.72□□□□□ -0.69
CUBNP1-201ENST00000412710 DNM1Q05193 864 aaKnown RBP10.72□□□□□ -0.69
CUBNP1-201ENST00000412710 KIAA1524Q8TCG1 905 aa10.72□□□□□ -0.69
CUBNP1-201ENST00000412710 PXDNQ92626 1479 aa10.71□□□□□ -0.69
CUBNP1-201ENST00000412710 FIBPO43427 364 aa10.71□□□□□ -0.69
CUBNP1-201ENST00000412710 SASH1O94885 1247 aa10.71□□□□□ -0.69
CUBNP1-201ENST00000412710 RPS6KB1P23443 525 aa10.71□□□□□ -0.69
CUBNP1-201ENST00000412710 G3BP1Q13283 466 aaKnown RBP eCLIP10.71□□□□□ -0.69
CUBNP1-201ENST00000412710 C1orf141Q5JVX7 400 aa10.71□□□□□ -0.69
CUBNP1-201ENST00000412710 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.71□□□□□ -0.69
CUBNP1-201ENST00000412710 AACSQ86V21 672 aa10.71□□□□□ -0.69
CUBNP1-201ENST00000412710 ARHGEF25Q86VW2 580 aa10.71□□□□□ -0.69
CUBNP1-201ENST00000412710 LTV1Q96GA3 475 aaPredicted RBP10.71□□□□□ -0.69
CUBNP1-201ENST00000412710 KAZALD1Q96I82 304 aa10.71□□□□□ -0.69
CUBNP1-201ENST00000412710 TPCN1Q9ULQ1 816 aa10.71□□□□□ -0.69
CUBNP1-201ENST00000412710 TMEM94Q12767 1356 aa10.7□□□□□ -0.7
CUBNP1-201ENST00000412710 KCNQ3O43525 872 aa10.7□□□□□ -0.7
CUBNP1-201ENST00000412710 NMIQ13287 307 aaPredicted RBP10.7□□□□□ -0.7
CUBNP1-201ENST00000412710 MAP3K11Q16584 847 aa10.7□□□□□ -0.7
CUBNP1-201ENST00000412710 LARP1BQ659C4 914 aaKnown RBP10.7□□□□□ -0.7
CUBNP1-201ENST00000412710 LARP1Q6PKG0 1096 aaKnown RBP10.7□□□□□ -0.7
CUBNP1-201ENST00000412710 BLOC1S2Q6QNY1 142 aa10.7□□□□□ -0.7
CUBNP1-201ENST00000412710 USHBP1Q8N6Y0 703 aa10.7□□□□□ -0.7
CUBNP1-201ENST00000412710 U3KPZ7 1027 aaPredicted RBP10.7□□□□□ -0.7
CUBNP1-201ENST00000412710 ATP5JP18859 108 aa10.7□□□□□ -0.7
CUBNP1-201ENST00000412710 CEBPAP49715 358 aaPredicted RBP10.7□□□□□ -0.7
CUBNP1-201ENST00000412710 TTC6Q86TZ1 520 aa10.7□□□□□ -0.7
CUBNP1-201ENST00000412710 EAF2Q96CJ1 260 aaPredicted RBP10.7□□□□□ -0.7
CUBNP1-201ENST00000412710 SUCLG2Q96I99 432 aa10.7□□□□□ -0.7
CUBNP1-201ENST00000412710 NUP62CLQ9H1M0 184 aa10.7□□□□□ -0.7
CUBNP1-201ENST00000412710 COPRSQ9NQ92 184 aa10.7□□□□□ -0.7
CUBNP1-201ENST00000412710 FAM13BQ9NYF5 915 aa10.7□□□□□ -0.7
CUBNP1-201ENST00000412710 TRPM3Q9HCF6 1732 aaPredicted RBP10.69□□□□□ -0.7
CUBNP1-201ENST00000412710 SCN11AQ9UI33 1791 aa10.69□□□□□ -0.7
CUBNP1-201ENST00000412710 NUTM2GQ5VZR2 741 aa10.69□□□□□ -0.7
CUBNP1-201ENST00000412710 ATL3Q6DD88 541 aa10.69□□□□□ -0.7
CUBNP1-201ENST00000412710 GIMAP6Q6P9H5 292 aa10.69□□□□□ -0.7
CUBNP1-201ENST00000412710 SMAP1Q8IYB5 467 aaPredicted RBP10.69□□□□□ -0.7
CUBNP1-201ENST00000412710 CHMP4CQ96CF2 233 aa10.69□□□□□ -0.7
CUBNP1-201ENST00000412710 LLPHQ9BRT6 129 aaKnown RBP10.69□□□□□ -0.7
CUBNP1-201ENST00000412710 KIF1AQ12756 1690 aa10.68□□□□□ -0.7
CUBNP1-201ENST00000412710 CPA1P15085 419 aa10.68□□□□□ -0.7
CUBNP1-201ENST00000412710 CDC25BP30305 580 aa10.68□□□□□ -0.7
CUBNP1-201ENST00000412710 TYRO3Q06418 890 aa10.68□□□□□ -0.7
CUBNP1-201ENST00000412710 TOB2Q14106 344 aaPredicted RBP10.68□□□□□ -0.7
CUBNP1-201ENST00000412710 PDIA6Q15084 440 aa10.68□□□□□ -0.7
CUBNP1-201ENST00000412710 SYCP1Q15431 976 aa10.68□□□□□ -0.7
CUBNP1-201ENST00000412710 TDRD7Q8NHU6 1098 aaKnown RBP10.68□□□□□ -0.7
CUBNP1-201ENST00000412710 CCDC94Q9BW85 323 aaPredicted RBP10.68□□□□□ -0.7
CUBNP1-201ENST00000412710 ZMYND15Q9H091 742 aa10.68□□□□□ -0.7
CUBNP1-201ENST00000412710 CLSTN2Q9H4D0 955 aa10.68□□□□□ -0.7
CUBNP1-201ENST00000412710 ZSCAN16Q9H4T2 348 aaPredicted RBP10.68□□□□□ -0.7
CUBNP1-201ENST00000412710 BICC1Q9H694 974 aaKnown RBP10.68□□□□□ -0.7
CUBNP1-201ENST00000412710 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.68□□□□□ -0.7
CUBNP1-201ENST00000412710 VPS37CA5D8V6 355 aaPredicted RBP10.67□□□□□ -0.7
CUBNP1-201ENST00000412710 TAF5LO75529 589 aa10.67□□□□□ -0.7
CUBNP1-201ENST00000412710 KCNJ4P48050 445 aa10.67□□□□□ -0.7
CUBNP1-201ENST00000412710 RBM10P98175 930 aaKnown RBP10.67□□□□□ -0.7
CUBNP1-201ENST00000412710 FOXD4L6Q3SYB3 417 aaPredicted RBP10.67□□□□□ -0.7
CUBNP1-201ENST00000412710 FOXD4L3Q6VB84 417 aaPredicted RBP10.67□□□□□ -0.7
CUBNP1-201ENST00000412710 FAM227BQ96M60 508 aa10.67□□□□□ -0.7
CUBNP1-201ENST00000412710 TTC12Q9H892 705 aaPredicted RBP10.67□□□□□ -0.7
CUBNP1-201ENST00000412710 PA2G4Q9UQ80 394 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms