RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 MKRN1Q9UHC7 482 aaKnown RBP9.85□□□□□ -0.83
PBRM1-209ENST00000412587 IFIT5Q13325 482 aaKnown RBP9.85□□□□□ -0.83
PBRM1-209ENST00000412587 MAP9Q49MG5 647 aa9.85□□□□□ -0.83
PBRM1-209ENST00000412587 BLOC1S2Q6QNY1 142 aa9.85□□□□□ -0.83
PBRM1-209ENST00000412587 ASXL1Q8IXJ9 1541 aa9.85□□□□□ -0.83
PBRM1-209ENST00000412587 HCLS1P14317 486 aaPredicted RBP9.85□□□□□ -0.83
PBRM1-209ENST00000412587 SLC20A2Q08357 652 aa9.85□□□□□ -0.83
PBRM1-209ENST00000412587 GOLGA5Q8TBA6 731 aa9.85□□□□□ -0.83
PBRM1-209ENST00000412587 SDF4Q9BRK5 362 aa9.85□□□□□ -0.83
PBRM1-209ENST00000412587 TRMT1Q9NXH9 659 aaKnown RBP9.85□□□□□ -0.83
PBRM1-209ENST00000412587 POLKQ9UBT6 870 aa9.85□□□□□ -0.83
PBRM1-209ENST00000412587 ABCF2Q9UG63 623 aa9.85□□□□□ -0.83
PBRM1-209ENST00000412587 IFIT1P09914 478 aaKnown RBP9.84□□□□□ -0.83
PBRM1-209ENST00000412587 MX1P20591 662 aa9.84□□□□□ -0.83
PBRM1-209ENST00000412587 ATP2B2Q01814 1243 aa9.84□□□□□ -0.83
PBRM1-209ENST00000412587 RBBP5Q15291 538 aaKnown RBP9.84□□□□□ -0.83
PBRM1-209ENST00000412587 NBPF11Q86T75 865 aa9.84□□□□□ -0.83
PBRM1-209ENST00000412587 IPO7O95373 1038 aaKnown RBP9.84□□□□□ -0.83
PBRM1-209ENST00000412587 SNRPA1P09661 255 aaKnown RBP9.84□□□□□ -0.83
PBRM1-209ENST00000412587 RBM5P52756 815 aaKnown RBP eCLIP9.84□□□□□ -0.83
PBRM1-209ENST00000412587 HNRNPH2P55795 449 aaKnown RBP9.84□□□□□ -0.83
PBRM1-209ENST00000412587 GSDMDP57764 484 aa9.84□□□□□ -0.83
PBRM1-209ENST00000412587 POTEDQ86YR6 584 aa9.84□□□□□ -0.83
PBRM1-209ENST00000412587 RSRC1Q96IZ7 334 aaKnown RBP9.84□□□□□ -0.83
PBRM1-209ENST00000412587 SPINK5Q9NQ38 1064 aaPredicted RBP9.84□□□□□ -0.83
PBRM1-209ENST00000412587 ZSCAN12O43309 604 aa9.84□□□□□ -0.83
PBRM1-209ENST00000412587 SFPQP23246 707 aaKnown RBP eCLIP9.84□□□□□ -0.83
PBRM1-209ENST00000412587 NAA25Q14CX7 972 aa9.84□□□□□ -0.83
PBRM1-209ENST00000412587 ZCRB1Q8TBF4 217 aaKnown RBP9.84□□□□□ -0.83
PBRM1-209ENST00000412587 PCMTD1Q96MG8 357 aaPredicted RBP9.84□□□□□ -0.83
PBRM1-209ENST00000412587 SPATS2LQ9NUQ6 558 aaKnown RBP9.84□□□□□ -0.83
PBRM1-209ENST00000412587 GPTP24298 496 aa9.84□□□□□ -0.83
PBRM1-209ENST00000412587 EIF4A2Q14240 407 aaKnown RBP9.84□□□□□ -0.83
PBRM1-209ENST00000412587 ARHGAP29Q52LW3 1261 aa9.84□□□□□ -0.83
PBRM1-209ENST00000412587 RNF187Q5TA31 235 aaPredicted RBP9.84□□□□□ -0.83
PBRM1-209ENST00000412587 MCM3P25205 808 aa9.83□□□□□ -0.84
PBRM1-209ENST00000412587 CLNS1AP54105 237 aaKnown RBP9.83□□□□□ -0.84
PBRM1-209ENST00000412587 ZRSR2Q15696 482 aaKnown RBP9.83□□□□□ -0.84
PBRM1-209ENST00000412587 DNAJC21Q5F1R6 531 aaKnown RBP9.83□□□□□ -0.84
PBRM1-209ENST00000412587 RRP15Q9Y3B9 282 aaKnown RBP9.83□□□□□ -0.84
PBRM1-209ENST00000412587 ATP7AQ04656 1500 aa9.83□□□□□ -0.84
PBRM1-209ENST00000412587 SMARCA5O60264 1052 aaPredicted RBP9.83□□□□□ -0.84
PBRM1-209ENST00000412587 CCDC186Q7Z3E2 898 aa9.83□□□□□ -0.84
PBRM1-209ENST00000412587 TRIM22Q8IYM9 498 aa9.83□□□□□ -0.84
PBRM1-209ENST00000412587 PI4KAP2A4QPH2 592 aa9.83□□□□□ -0.84
PBRM1-209ENST00000412587 PI4KAP1Q8N8J0 262 aa9.83□□□□□ -0.84
PBRM1-209ENST00000412587 CABLES1Q8TDN4 633 aa9.83□□□□□ -0.84
PBRM1-209ENST00000412587 NPATQ14207 1427 aa9.83□□□□□ -0.84
PBRM1-209ENST00000412587 YTHDC2Q9H6S0 1430 aaKnown RBP9.83□□□□□ -0.84
PBRM1-209ENST00000412587 STK3Q13188 491 aa9.83□□□□□ -0.84
PBRM1-209ENST00000412587 KRT32Q14532 448 aa9.83□□□□□ -0.84
PBRM1-209ENST00000412587 MCTP2Q6DN12 878 aa9.83□□□□□ -0.84
PBRM1-209ENST00000412587 CEP57Q86XR8 500 aa9.83□□□□□ -0.84
PBRM1-209ENST00000412587 FAM177A1Q8N128 213 aaPredicted RBP9.83□□□□□ -0.84
PBRM1-209ENST00000412587 MAP3K2Q9Y2U5 619 aa9.83□□□□□ -0.84
PBRM1-209ENST00000412587 PZPP20742 1482 aa9.83□□□□□ -0.84
PBRM1-209ENST00000412587 DNMT1P26358 1616 aaKnown RBP9.82□□□□□ -0.84
PBRM1-209ENST00000412587 ERLIN2O94905 339 aa9.82□□□□□ -0.84
PBRM1-209ENST00000412587 NEK11Q8NG66 645 aa9.82□□□□□ -0.84
PBRM1-209ENST00000412587 BOLA2Q9H3K6 86 aa9.82□□□□□ -0.84
PBRM1-209ENST00000412587 FLT4P35916 1363 aa9.82□□□□□ -0.84
PBRM1-209ENST00000412587 PIK3R4Q99570 1358 aa9.82□□□□□ -0.84
PBRM1-209ENST00000412587 IBTKQ9P2D0 1353 aaPredicted RBP9.82□□□□□ -0.84
PBRM1-209ENST00000412587 ANXA1P04083 346 aa9.82□□□□□ -0.84
PBRM1-209ENST00000412587 CASTP20810 708 aaKnown RBP9.82□□□□□ -0.84
PBRM1-209ENST00000412587 BIRC2Q13490 618 aa9.82□□□□□ -0.84
PBRM1-209ENST00000412587 CAVIN4Q5BKX8 364 aa9.82□□□□□ -0.84
PBRM1-209ENST00000412587 PDILTQ8N807 584 aa9.82□□□□□ -0.84
PBRM1-209ENST00000412587 CAGE1Q8TC20 777 aa9.82□□□□□ -0.84
PBRM1-209ENST00000412587 AIDAQ96BJ3 306 aa9.82□□□□□ -0.84
PBRM1-209ENST00000412587 JAKMIP1Q96N16 626 aaKnown RBP9.82□□□□□ -0.84
PBRM1-209ENST00000412587 VPS18Q9P253 973 aa9.82□□□□□ -0.84
PBRM1-209ENST00000412587 MYO1CO00159 1063 aa9.82□□□□□ -0.84
PBRM1-209ENST00000412587 KINO60870 393 aaKnown RBP9.82□□□□□ -0.84
PBRM1-209ENST00000412587 GCP02774 474 aa9.82□□□□□ -0.84
PBRM1-209ENST00000412587 KRT85P78386 507 aa9.82□□□□□ -0.84
PBRM1-209ENST00000412587 RAD51AP2Q09MP3 1159 aa9.82□□□□□ -0.84
PBRM1-209ENST00000412587 NUP133Q8WUM0 1156 aa9.82□□□□□ -0.84
PBRM1-209ENST00000412587 ANKRD18BA2A2Z9 1011 aa9.82□□□□□ -0.84
PBRM1-209ENST00000412587 CCDC69A6NI79 296 aa9.82□□□□□ -0.84
PBRM1-209ENST00000412587 EIF5P55010 431 aaKnown RBP9.82□□□□□ -0.84
PBRM1-209ENST00000412587 ZSCAN29Q8IWY8 852 aaPredicted RBP9.82□□□□□ -0.84
PBRM1-209ENST00000412587 EIF2AK4Q9P2K8 1649 aaKnown RBP9.82□□□□□ -0.84
PBRM1-209ENST00000412587 ARHGEF12Q9NZN5 1544 aa9.81□□□□□ -0.84
PBRM1-209ENST00000412587 ATP5J2-PTCD1G3V325 749 aa9.81□□□□□ -0.84
PBRM1-209ENST00000412587 SEC24BO95487 1268 aa9.81□□□□□ -0.84
PBRM1-209ENST00000412587 UBAC1Q9BSL1 405 aa9.81□□□□□ -0.84
PBRM1-209ENST00000412587 CARD14Q9BXL6 1004 aa9.81□□□□□ -0.84
PBRM1-209ENST00000412587 ADGRL2O95490 1459 aa9.81□□□□□ -0.84
PBRM1-209ENST00000412587 GCKP35557 465 aa9.81□□□□□ -0.84
PBRM1-209ENST00000412587 ENOX2Q16206 610 aaKnown RBP9.81□□□□□ -0.84
PBRM1-209ENST00000412587 UBE3BQ7Z3V4 1068 aa9.81□□□□□ -0.84
PBRM1-209ENST00000412587 CCDC8Q9H0W5 538 aaPredicted RBP9.81□□□□□ -0.84
PBRM1-209ENST00000412587 KDM2BQ8NHM5 1336 aa9.81□□□□□ -0.84
PBRM1-209ENST00000412587 STK38Q15208 465 aa9.81□□□□□ -0.84
PBRM1-209ENST00000412587 AKAP4Q5JQC9 854 aa9.81□□□□□ -0.84
PBRM1-209ENST00000412587 CEP57L1Q8IYX8 460 aa9.81□□□□□ -0.84
PBRM1-209ENST00000412587 ZNF396Q96N95 335 aaPredicted RBP9.81□□□□□ -0.84
PBRM1-209ENST00000412587 CWC25Q9NXE8 425 aaPredicted RBP9.81□□□□□ -0.84
PBRM1-209ENST00000412587 POLR3AO14802 1390 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms