RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 CHMP4AQ9BY43 222 aa11.98□□□□□ -0.49
SMPD4-203ENST00000412570 BACH2Q9BYV9 841 aa11.98□□□□□ -0.49
SMPD4-203ENST00000412570 RTCBQ9Y3I0 505 aaKnown RBP11.98□□□□□ -0.49
SMPD4-203ENST00000412570 WTIPA6NIX2 430 aaPredicted RBP11.98□□□□□ -0.49
SMPD4-203ENST00000412570 ANP32AP39687 249 aaKnown RBP11.98□□□□□ -0.49
SMPD4-203ENST00000412570 TFCP2Q12800 502 aa11.98□□□□□ -0.49
SMPD4-203ENST00000412570 TCIRG1Q13488 830 aa11.98□□□□□ -0.49
SMPD4-203ENST00000412570 GORABQ5T7V8 394 aa11.98□□□□□ -0.49
SMPD4-203ENST00000412570 CCDC57Q2TAC2 916 aa11.98□□□□□ -0.49
SMPD4-203ENST00000412570 SLFNL1Q499Z3 407 aa11.98□□□□□ -0.49
SMPD4-203ENST00000412570 ERICH6Q7L0X2 663 aa11.98□□□□□ -0.49
SMPD4-203ENST00000412570 GCC1Q96CN9 775 aa11.98□□□□□ -0.49
SMPD4-203ENST00000412570 RGS17Q9UGC6 210 aaPredicted RBP11.98□□□□□ -0.49
SMPD4-203ENST00000412570 USP54Q70EL1 1684 aa11.98□□□□□ -0.49
SMPD4-203ENST00000412570 C8orf34Q49A92 452 aa11.97□□□□□ -0.49
SMPD4-203ENST00000412570 HSP90AB3PQ58FF7 597 aa11.97□□□□□ -0.49
SMPD4-203ENST00000412570 TEX13AQ9BXU3 409 aaPredicted RBP11.97□□□□□ -0.49
SMPD4-203ENST00000412570 GREM2Q9H772 168 aa11.97□□□□□ -0.49
SMPD4-203ENST00000412570 CNNM1Q9NRU3 951 aa11.97□□□□□ -0.49
SMPD4-203ENST00000412570 ZNF772Q68DY9 489 aaPredicted RBP11.97□□□□□ -0.49
SMPD4-203ENST00000412570 MAP3K15Q6ZN16 1313 aa11.97□□□□□ -0.49
SMPD4-203ENST00000412570 TBC1D9BQ66K14 1250 aa11.97□□□□□ -0.49
SMPD4-203ENST00000412570 PLEKHM2Q8IWE5 1019 aa11.97□□□□□ -0.49
SMPD4-203ENST00000412570 ARHGEF1Q92888 912 aaKnown RBP11.97□□□□□ -0.49
SMPD4-203ENST00000412570 SMARCC1Q92922 1105 aaPredicted RBP11.97□□□□□ -0.49
SMPD4-203ENST00000412570 PDGFDQ9GZP0 370 aaPredicted RBP11.97□□□□□ -0.49
SMPD4-203ENST00000412570 UBN2Q6ZU65 1347 aa11.96□□□□□ -0.49
SMPD4-203ENST00000412570 ALDH1L1O75891 902 aa11.96□□□□□ -0.5
SMPD4-203ENST00000412570 GIGYF2Q6Y7W6 1299 aaKnown RBP11.96□□□□□ -0.5
SMPD4-203ENST00000412570 NLRP10Q86W26 655 aa11.96□□□□□ -0.5
SMPD4-203ENST00000412570 NBPF5PQ86XG9 351 aaPredicted RBP11.96□□□□□ -0.5
SMPD4-203ENST00000412570 DAXXQ9UER7 740 aaPredicted RBP11.96□□□□□ -0.5
SMPD4-203ENST00000412570 ATP10DQ9P241 1426 aa11.96□□□□□ -0.5
SMPD4-203ENST00000412570 GSPT1P15170 499 aaKnown RBP11.96□□□□□ -0.5
SMPD4-203ENST00000412570 CLASRPQ8N2M8 674 aaKnown RBP11.96□□□□□ -0.5
SMPD4-203ENST00000412570 MX1P20591 662 aa11.95□□□□□ -0.5
SMPD4-203ENST00000412570 TXNRD1Q16881 649 aa11.95□□□□□ -0.5
SMPD4-203ENST00000412570 ERFEQ4G0M1 354 aa11.95□□□□□ -0.5
SMPD4-203ENST00000412570 LDHAL6AQ6ZMR3 332 aa11.95□□□□□ -0.5
SMPD4-203ENST00000412570 EZH2Q15910 746 aaKnown RBP11.94□□□□□ -0.5
SMPD4-203ENST00000412570 TRAPPC3LQ5T215 181 aa11.94□□□□□ -0.5
SMPD4-203ENST00000412570 C3orf67Q6ZVT6 689 aa11.94□□□□□ -0.5
SMPD4-203ENST00000412570 C5P01031 1676 aa11.94□□□□□ -0.5
SMPD4-203ENST00000412570 SCN11AQ9UI33 1791 aa11.94□□□□□ -0.5
SMPD4-203ENST00000412570 SDSP20132 328 aa11.94□□□□□ -0.5
SMPD4-203ENST00000412570 ITGA6P23229 1130 aa11.94□□□□□ -0.5
SMPD4-203ENST00000412570 EIF5P55010 431 aaKnown RBP11.94□□□□□ -0.5
SMPD4-203ENST00000412570 FKBP4Q02790 459 aaKnown RBP eCLIP11.94□□□□□ -0.5
SMPD4-203ENST00000412570 EAF2Q96CJ1 260 aaPredicted RBP11.94□□□□□ -0.5
SMPD4-203ENST00000412570 IL6STP40189 918 aaPredicted RBP11.93□□□□□ -0.5
SMPD4-203ENST00000412570 PDE1AP54750 535 aa11.93□□□□□ -0.5
SMPD4-203ENST00000412570 IFIT5Q13325 482 aaKnown RBP11.93□□□□□ -0.5
SMPD4-203ENST00000412570 PI16Q6UXB8 463 aa11.93□□□□□ -0.5
SMPD4-203ENST00000412570 STK11IPQ8N1F8 1099 aa11.93□□□□□ -0.5
SMPD4-203ENST00000412570 GPR101Q96P66 508 aaPredicted RBP11.93□□□□□ -0.5
SMPD4-203ENST00000412570 SETDB2Q96T68 719 aa11.93□□□□□ -0.5
SMPD4-203ENST00000412570 DBNDD2Q9BQY9 259 aa11.93□□□□□ -0.5
SMPD4-203ENST00000412570 SASH1O94885 1247 aa11.93□□□□□ -0.5
SMPD4-203ENST00000412570 PARP4Q9UKK3 1724 aaKnown RBP11.93□□□□□ -0.5
SMPD4-203ENST00000412570 METTL24Q5JXM2 366 aa11.93□□□□□ -0.5
SMPD4-203ENST00000412570 CWC27Q6UX04 472 aaKnown RBP11.93□□□□□ -0.5
SMPD4-203ENST00000412570 DDX46Q7L014 1031 aaKnown RBP11.93□□□□□ -0.5
SMPD4-203ENST00000412570 SSH3Q8TE77 659 aa11.93□□□□□ -0.5
SMPD4-203ENST00000412570 VIRMAQ69YN4 1812 aaKnown RBP11.93□□□□□ -0.5
SMPD4-203ENST00000412570 COL15A1P39059 1388 aa11.92□□□□□ -0.5
SMPD4-203ENST00000412570 LARP6Q9BRS8 491 aaKnown RBP11.92□□□□□ -0.5
SMPD4-203ENST00000412570 UPF2Q9HAU5 1272 aaKnown RBP11.92□□□□□ -0.5
SMPD4-203ENST00000412570 ILDR1Q86SU0 546 aaPredicted RBP11.92□□□□□ -0.5
SMPD4-203ENST00000412570 CCDC191Q8NCU4 936 aa11.92□□□□□ -0.5
SMPD4-203ENST00000412570 MPHOSPH8Q99549 860 aa11.92□□□□□ -0.5
SMPD4-203ENST00000412570 TOGARAM1Q9Y4F4 1720 aa11.92□□□□□ -0.5
SMPD4-203ENST00000412570 TBC1D9Q6ZT07 1266 aa11.92□□□□□ -0.5
SMPD4-203ENST00000412570 VSIG10Q8N0Z9 540 aa11.92□□□□□ -0.5
SMPD4-203ENST00000412570 PROM2Q8N271 834 aa11.92□□□□□ -0.5
SMPD4-203ENST00000412570 UTP14AQ9BVJ6 771 aaKnown RBP11.92□□□□□ -0.5
SMPD4-203ENST00000412570 LRRC37A3O60309 1634 aa11.91□□□□□ -0.5
SMPD4-203ENST00000412570 CAMTA2O94983 1202 aa11.91□□□□□ -0.5
SMPD4-203ENST00000412570 ADORA1P30542 326 aa11.91□□□□□ -0.5
SMPD4-203ENST00000412570 PTPN12Q05209 780 aaKnown RBP11.91□□□□□ -0.5
SMPD4-203ENST00000412570 KIF1BPQ96EK5 621 aa11.91□□□□□ -0.5
SMPD4-203ENST00000412570 SLKQ9H2G2 1235 aaPredicted RBP11.91□□□□□ -0.5
SMPD4-203ENST00000412570 ANO2Q9NQ90 1003 aa11.91□□□□□ -0.5
SMPD4-203ENST00000412570 KCPQ6ZWJ8 1503 aa11.91□□□□□ -0.5
SMPD4-203ENST00000412570 DOT1LQ8TEK3 1739 aa11.91□□□□□ -0.5
SMPD4-203ENST00000412570 FOXO4P98177 505 aa11.91□□□□□ -0.5
SMPD4-203ENST00000412570 SF3B2Q13435 895 aaKnown RBP11.91□□□□□ -0.5
SMPD4-203ENST00000412570 FBXO41Q8TF61 875 aa11.91□□□□□ -0.5
SMPD4-203ENST00000412570 NBR1Q14596 966 aa11.91□□□□□ -0.5
SMPD4-203ENST00000412570 FRAT2O75474 233 aaPredicted RBP11.9□□□□□ -0.5
SMPD4-203ENST00000412570 KDM3BQ7LBC6 1761 aa11.9□□□□□ -0.5
SMPD4-203ENST00000412570 ZNF827Q17R98 1081 aa11.9□□□□□ -0.5
SMPD4-203ENST00000412570 TPRNQ4KMQ1 711 aa11.9□□□□□ -0.5
SMPD4-203ENST00000412570 SH3TC1Q8TE82 1336 aa11.9□□□□□ -0.5
SMPD4-203ENST00000412570 H7C1W4 665 aa11.9□□□□□ -0.51
SMPD4-203ENST00000412570 OLFM4Q6UX06 510 aa11.9□□□□□ -0.51
SMPD4-203ENST00000412570 ZBTB38Q8NAP3 1195 aaPredicted RBP11.9□□□□□ -0.51
SMPD4-203ENST00000412570 GLI3P10071 1580 aa11.89□□□□□ -0.51
SMPD4-203ENST00000412570 TTC22Q5TAA0 569 aa11.89□□□□□ -0.51
SMPD4-203ENST00000412570 CEP126Q9P2H0 1117 aa11.89□□□□□ -0.51
SMPD4-203ENST00000412570 SLC4A8Q2Y0W8 1093 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms