RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 C21orf2O43822 256 aa10.39□□□□□ -0.75
LSM5-202ENST00000409292 EIF5P55010 431 aaKnown RBP10.39□□□□□ -0.75
LSM5-202ENST00000409292 MTHFSDQ2M296 383 aaKnown RBP10.39□□□□□ -0.75
LSM5-202ENST00000409292 FMNL2Q96PY5 1086 aa10.39□□□□□ -0.75
LSM5-202ENST00000409292 NFKBIEO00221 500 aa10.38□□□□□ -0.75
LSM5-202ENST00000409292 RIMBP2O15034 1052 aa10.38□□□□□ -0.75
LSM5-202ENST00000409292 EMP3P54852 163 aa10.38□□□□□ -0.75
LSM5-202ENST00000409292 STYK1Q6J9G0 422 aa10.38□□□□□ -0.75
LSM5-202ENST00000409292 ZNF710Q8N1W2 664 aa10.38□□□□□ -0.75
LSM5-202ENST00000409292 MARVELD3Q96A59 401 aa10.38□□□□□ -0.75
LSM5-202ENST00000409292 CFAP53Q96M91 514 aa10.38□□□□□ -0.75
LSM5-202ENST00000409292 BCL2L12Q9HB09 334 aa10.38□□□□□ -0.75
LSM5-202ENST00000409292 LTBP3Q9NS15 1303 aa10.37□□□□□ -0.75
LSM5-202ENST00000409292 MRC1P22897 1456 aa10.37□□□□□ -0.75
LSM5-202ENST00000409292 HOXB3P14651 431 aaPredicted RBP10.37□□□□□ -0.75
LSM5-202ENST00000409292 TBC1D9BQ66K14 1250 aa10.37□□□□□ -0.75
LSM5-202ENST00000409292 ZNF790Q6PG37 636 aa10.37□□□□□ -0.75
LSM5-202ENST00000409292 CCER1Q8TC90 406 aaPredicted RBP10.37□□□□□ -0.75
LSM5-202ENST00000409292 RTF1Q92541 710 aaKnown RBP10.37□□□□□ -0.75
LSM5-202ENST00000409292 MASTLQ96GX5 879 aa10.37□□□□□ -0.75
LSM5-202ENST00000409292 TBC1D2BQ9UPU7 963 aa10.37□□□□□ -0.75
LSM5-202ENST00000409292 HEG1Q9ULI3 1381 aa10.37□□□□□ -0.75
LSM5-202ENST00000409292 GTF2E1P29083 439 aaPredicted RBP10.36□□□□□ -0.75
LSM5-202ENST00000409292 CCDC93Q567U6 631 aa10.36□□□□□ -0.75
LSM5-202ENST00000409292 AMER1Q5JTC6 1135 aaPredicted RBP10.36□□□□□ -0.75
LSM5-202ENST00000409292 PRR5LQ6MZQ0 368 aa10.36□□□□□ -0.75
LSM5-202ENST00000409292 NBPF5PQ86XG9 351 aaPredicted RBP10.36□□□□□ -0.75
LSM5-202ENST00000409292 DZIP3Q86Y13 1208 aaKnown RBP10.36□□□□□ -0.75
LSM5-202ENST00000409292 NUDCQ9Y266 331 aa10.36□□□□□ -0.75
LSM5-202ENST00000409292 AFDNP55196 1824 aaKnown RBP10.35□□□□□ -0.75
LSM5-202ENST00000409292 BTBD11A6QL63 1104 aa10.35□□□□□ -0.75
LSM5-202ENST00000409292 NEFMP07197 916 aa10.35□□□□□ -0.75
LSM5-202ENST00000409292 CC2D1BQ5T0F9 858 aaKnown RBP10.35□□□□□ -0.75
LSM5-202ENST00000409292 TMEM92Q6UXU6 159 aa10.35□□□□□ -0.75
LSM5-202ENST00000409292 TPTE2Q6XPS3 522 aa10.35□□□□□ -0.75
LSM5-202ENST00000409292 LDHDQ86WU2 507 aa10.35□□□□□ -0.75
LSM5-202ENST00000409292 HS6ST3Q8IZP7 471 aa10.35□□□□□ -0.75
LSM5-202ENST00000409292 ZNF496Q96IT1 587 aaPredicted RBP10.35□□□□□ -0.75
LSM5-202ENST00000409292 MKRN1Q9UHC7 482 aaKnown RBP10.35□□□□□ -0.75
LSM5-202ENST00000409292 NRXN2Q9P2S2 1712 aa10.35□□□□□ -0.75
LSM5-202ENST00000409292 DLEC1Q9Y238 1755 aa10.34□□□□□ -0.75
LSM5-202ENST00000409292 TIAM2Q8IVF5 1701 aa10.34□□□□□ -0.75
LSM5-202ENST00000409292 NPR1P16066 1061 aa10.34□□□□□ -0.75
LSM5-202ENST00000409292 PRPF40BQ6NWY9 871 aaKnown RBP10.34□□□□□ -0.75
LSM5-202ENST00000409292 CLEC4GQ6UXB4 293 aa10.34□□□□□ -0.75
LSM5-202ENST00000409292 PNMA8AQ86V59 439 aaPredicted RBP10.34□□□□□ -0.75
LSM5-202ENST00000409292 RTKN2Q8IZC4 609 aa10.34□□□□□ -0.75
LSM5-202ENST00000409292 TMX4Q9H1E5 349 aaPredicted RBP10.34□□□□□ -0.75
LSM5-202ENST00000409292 DDNO94850 711 aaPredicted RBP10.33□□□□□ -0.76
LSM5-202ENST00000409292 SNRPA1P09661 255 aaKnown RBP10.33□□□□□ -0.76
LSM5-202ENST00000409292 SRGNP10124 158 aa10.33□□□□□ -0.76
LSM5-202ENST00000409292 ALDH1B1P30837 517 aa10.33□□□□□ -0.76
LSM5-202ENST00000409292 CTCFP49711 727 aaPredicted RBP10.33□□□□□ -0.76
LSM5-202ENST00000409292 EAPPQ56P03 285 aaPredicted RBP10.33□□□□□ -0.76
LSM5-202ENST00000409292 CCDC24Q8N4L8 307 aa10.33□□□□□ -0.76
LSM5-202ENST00000409292 HACL1Q9UJ83 578 aa10.33□□□□□ -0.76
LSM5-202ENST00000409292 ADAMTS7Q9UKP4 1686 aa10.33□□□□□ -0.76
LSM5-202ENST00000409292 CCDC88AQ3V6T2 1871 aa10.32□□□□□ -0.76
LSM5-202ENST00000409292 TMEM88BA6NKF7 163 aa10.32□□□□□ -0.76
LSM5-202ENST00000409292 A1BGP04217 495 aa10.32□□□□□ -0.76
LSM5-202ENST00000409292 HOXB1P14653 301 aaPredicted RBP10.32□□□□□ -0.76
LSM5-202ENST00000409292 CNGB1Q14028 1251 aaPredicted RBP10.32□□□□□ -0.76
LSM5-202ENST00000409292 IL17REQ8NFR9 667 aa10.32□□□□□ -0.76
LSM5-202ENST00000409292 JDP2Q8WYK2 163 aa10.32□□□□□ -0.76
LSM5-202ENST00000409292 ZSWIM6Q9HCJ5 1215 aa10.32□□□□□ -0.76
LSM5-202ENST00000409292 PRDM10Q9NQV6 1147 aa10.32□□□□□ -0.76
LSM5-202ENST00000409292 POTECB2RU33 542 aa10.31□□□□□ -0.76
LSM5-202ENST00000409292 CAMTA2O94983 1202 aa10.31□□□□□ -0.76
LSM5-202ENST00000409292 LMOD1P29536 600 aaPredicted RBP10.31□□□□□ -0.76
LSM5-202ENST00000409292 FKBP4Q02790 459 aaKnown RBP eCLIP10.31□□□□□ -0.76
LSM5-202ENST00000409292 GRIPAP1Q4V328 841 aa10.31□□□□□ -0.76
LSM5-202ENST00000409292 BEGAINQ9BUH8 593 aa10.31□□□□□ -0.76
LSM5-202ENST00000409292 TAF1DQ9H5J8 278 aaPredicted RBP10.31□□□□□ -0.76
LSM5-202ENST00000409292 NIP7Q9Y221 180 aaKnown RBP eCLIP10.31□□□□□ -0.76
LSM5-202ENST00000409292 KIF7Q2M1P5 1343 aa10.31□□□□□ -0.76
LSM5-202ENST00000409292 CNTNAP1P78357 1384 aa10.3□□□□□ -0.76
LSM5-202ENST00000409292 EPHX2P34913 555 aa10.3□□□□□ -0.76
LSM5-202ENST00000409292 EIF6P56537 245 aaKnown RBP10.3□□□□□ -0.76
LSM5-202ENST00000409292 MAP2K1Q02750 393 aaPredicted RBP10.3□□□□□ -0.76
LSM5-202ENST00000409292 CC2D2BQ6DHV5 1058 aa10.3□□□□□ -0.76
LSM5-202ENST00000409292 NYXQ9GZU5 481 aa10.3□□□□□ -0.76
LSM5-202ENST00000409292 UBR2Q8IWV8 1755 aa10.29□□□□□ -0.76
LSM5-202ENST00000409292 DICER1Q9UPY3 1922 aaKnown RBP10.29□□□□□ -0.76
LSM5-202ENST00000409292 VIRMAQ69YN4 1812 aaKnown RBP10.29□□□□□ -0.76
LSM5-202ENST00000409292 PRKAR2BP31323 418 aa10.29□□□□□ -0.76
LSM5-202ENST00000409292 ABT1Q9ULW3 272 aaKnown RBP10.29□□□□□ -0.76
LSM5-202ENST00000409292 SCN7AQ01118 1682 aa10.28□□□□□ -0.76
LSM5-202ENST00000409292 NPC1L1Q9UHC9 1359 aa10.28□□□□□ -0.76
LSM5-202ENST00000409292 FER1L6Q2WGJ9 1857 aa10.28□□□□□ -0.76
LSM5-202ENST00000409292 FAM205CA6NFA0 338 aa10.28□□□□□ -0.76
LSM5-202ENST00000409292 FAM177BA6PVY3 158 aa10.28□□□□□ -0.76
LSM5-202ENST00000409292 HTATSF1O43719 755 aaKnown RBP10.28□□□□□ -0.76
LSM5-202ENST00000409292 U2AF1L5P0DN76 240 aaPredicted RBP10.28□□□□□ -0.76
LSM5-202ENST00000409292 IARSP41252 1262 aaKnown RBP10.28□□□□□ -0.76
LSM5-202ENST00000409292 ECE1P42892 770 aa10.28□□□□□ -0.76
LSM5-202ENST00000409292 U2AF1Q01081 240 aaKnown RBP eCLIP10.28□□□□□ -0.76
LSM5-202ENST00000409292 DEFB115Q30KQ5 88 aa10.28□□□□□ -0.76
LSM5-202ENST00000409292 PAXIP1Q6ZW49 1069 aaPredicted RBP10.28□□□□□ -0.76
LSM5-202ENST00000409292 GPC2Q8N158 579 aa10.28□□□□□ -0.76
LSM5-202ENST00000409292 PNISRQ8TF01 805 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms